; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0016181 (gene) of Chayote v1 genome

Gene IDSed0016181
OrganismSechium edule (Chayote v1)
DescriptionrecQ-mediated genome instability protein 2
Genome locationLG03:12479398..12481397
RNA-Seq ExpressionSed0016181
SyntenySed0016181
Gene Ontology termsGO:0009555 - pollen development (biological process)
GO:0033045 - regulation of sister chromatid segregation (biological process)
GO:0043007 - maintenance of rDNA (biological process)
GO:2000042 - negative regulation of double-strand break repair via homologous recombination (biological process)
GO:0005829 - cytosol (cellular component)
GO:0016020 - membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016607 - nuclear speck (cellular component)
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold
IPR032245 - RecQ-mediated genome instability protein 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008462275.1 PREDICTED: recQ-mediated genome instability protein 2 [Cucumis melo]4.1e-5582.09Show/hide
Query:  MDYSLAALKLLCRQLKDARPTPSNNAAALGGILFQRVWLQGILVSVDKPNAKLILDDGTGTVEISLLRDFRLRNWNLGMYVMVVGAFVVRTNQPPVIGVH
        MDYSLAALKLLCRQLKDAR TPS+  A L GILFQR WLQGILVSVDK N KLILDDGTGTVE+SL R+F LR W+LGMYVMVVGAF+ RTN+PP I VH
Subjt:  MDYSLAALKLLCRQLKDARPTPSNNAAALGGILFQRVWLQGILVSVDKPNAKLILDDGTGTVEISLLRDFRLRNWNLGMYVMVVGAFVVRTNQPPVIGVH

Query:  KIVDLSNFPDREAMWYLEVMEAYKMFYEPLIEEF
        KIVDLS  P+REAMWYLEVMEAYKMFYEPL+EEF
Subjt:  KIVDLSNFPDREAMWYLEVMEAYKMFYEPLIEEF

XP_022152884.1 recQ-mediated genome instability protein 2 isoform X1 [Momordica charantia]3.5e-5985.07Show/hide
Query:  MDYSLAALKLLCRQLKDARPTPSNNAAALGGILFQRVWLQGILVSVDKPNAKLILDDGTGTVEISLLRDFRLRNWNLGMYVMVVGAFVVRTNQPPVIGVH
        MDYSLAALK+LC QL  ARPTPS +AA LGGILFQR WLQGILVSVDK NA+L+LDDGTGTVE+SL RDFRLR WNLGMYVMVVGAFV+R N+PP+IGVH
Subjt:  MDYSLAALKLLCRQLKDARPTPSNNAAALGGILFQRVWLQGILVSVDKPNAKLILDDGTGTVEISLLRDFRLRNWNLGMYVMVVGAFVVRTNQPPVIGVH

Query:  KIVDLSNFPDREAMWYLEVMEAYKMFYEPLIEEF
        KIVDLS FP REAMWYLEVMEAYKMFYEPLIEEF
Subjt:  KIVDLSNFPDREAMWYLEVMEAYKMFYEPLIEEF

XP_022964663.1 uncharacterized protein LOC111464675 isoform X1 [Cucurbita moschata]9.6e-5782.96Show/hide
Query:  MDYSLAALKLLCRQLKDARPTPSNNAAALGGILFQRVWLQGILVSVDKPNAKLILDDGTGTVEISLLRDFRLRNWNLGMYVMVVGAFVVRTNQPPVIGVH
        MDYSLAALKLLCRQL DAR  PSNNAA LGGILFQR WLQGILV VD+ N KLILDDGTGTVE+SL  DFR R W+LGMYVMVVGA+VVRTN+P +I VH
Subjt:  MDYSLAALKLLCRQLKDARPTPSNNAAALGGILFQRVWLQGILVSVDKPNAKLILDDGTGTVEISLLRDFRLRNWNLGMYVMVVGAFVVRTNQPPVIGVH

Query:  KIVDLSNFPDREAMWYLEVMEAYKMFYEPLIEEFS
        KIVDLS FP REAMWYLEVMEAYKMFYEPL+EEFS
Subjt:  KIVDLSNFPDREAMWYLEVMEAYKMFYEPLIEEFS

XP_022970350.1 uncharacterized protein LOC111469342 [Cucurbita maxima]1.3e-5682.22Show/hide
Query:  MDYSLAALKLLCRQLKDARPTPSNNAAALGGILFQRVWLQGILVSVDKPNAKLILDDGTGTVEISLLRDFRLRNWNLGMYVMVVGAFVVRTNQPPVIGVH
        MDY+LAALKLLCRQL DAR  PSNNAA LGGILFQR WLQGILV VD+ N KLILDDGTGTVE+SL  DFR R W+LGMYVMVVGA+VVRTN+P +I VH
Subjt:  MDYSLAALKLLCRQLKDARPTPSNNAAALGGILFQRVWLQGILVSVDKPNAKLILDDGTGTVEISLLRDFRLRNWNLGMYVMVVGAFVVRTNQPPVIGVH

Query:  KIVDLSNFPDREAMWYLEVMEAYKMFYEPLIEEFS
        KIVDLS FP REAMWYLEVMEAYKMFYEPL+EEFS
Subjt:  KIVDLSNFPDREAMWYLEVMEAYKMFYEPLIEEFS

XP_038894076.1 uncharacterized protein LOC120082820 [Benincasa hispida]2.5e-6088.15Show/hide
Query:  MDYSLAALKLLCRQLKDARPTPSNNAAALGGILFQRVWLQGILVSVDKPNAKLILDDGTGTVEISLLRDFRLRNWNLGMYVMVVGAFVVRTNQPPVIGVH
        MDYSLAALKLLCRQLKDAR +P+NNAA LGGILFQR WLQG LVSVDK NAKLILDDGTGTVE+SL RDFRLR W LGMYVMVVGAFV RTN+PPVI VH
Subjt:  MDYSLAALKLLCRQLKDARPTPSNNAAALGGILFQRVWLQGILVSVDKPNAKLILDDGTGTVEISLLRDFRLRNWNLGMYVMVVGAFVVRTNQPPVIGVH

Query:  KIVDLSNFPDREAMWYLEVMEAYKMFYEPLIEEFS
        KIVDLS FPDREAMWYLEV+EAYKMFYEPLIEEFS
Subjt:  KIVDLSNFPDREAMWYLEVMEAYKMFYEPLIEEFS

TrEMBL top hitse value%identityAlignment
A0A1S3CGI5 recQ-mediated genome instability protein 22.0e-5582.09Show/hide
Query:  MDYSLAALKLLCRQLKDARPTPSNNAAALGGILFQRVWLQGILVSVDKPNAKLILDDGTGTVEISLLRDFRLRNWNLGMYVMVVGAFVVRTNQPPVIGVH
        MDYSLAALKLLCRQLKDAR TPS+  A L GILFQR WLQGILVSVDK N KLILDDGTGTVE+SL R+F LR W+LGMYVMVVGAF+ RTN+PP I VH
Subjt:  MDYSLAALKLLCRQLKDARPTPSNNAAALGGILFQRVWLQGILVSVDKPNAKLILDDGTGTVEISLLRDFRLRNWNLGMYVMVVGAFVVRTNQPPVIGVH

Query:  KIVDLSNFPDREAMWYLEVMEAYKMFYEPLIEEF
        KIVDLS  P+REAMWYLEVMEAYKMFYEPL+EEF
Subjt:  KIVDLSNFPDREAMWYLEVMEAYKMFYEPLIEEF

A0A5A7UD07 RecQ-mediated genome instability protein 22.0e-5582.09Show/hide
Query:  MDYSLAALKLLCRQLKDARPTPSNNAAALGGILFQRVWLQGILVSVDKPNAKLILDDGTGTVEISLLRDFRLRNWNLGMYVMVVGAFVVRTNQPPVIGVH
        MDYSLAALKLLCRQLKDAR TPS+  A L GILFQR WLQGILVSVDK N KLILDDGTGTVE+SL R+F LR W+LGMYVMVVGAF+ RTN+PP I VH
Subjt:  MDYSLAALKLLCRQLKDARPTPSNNAAALGGILFQRVWLQGILVSVDKPNAKLILDDGTGTVEISLLRDFRLRNWNLGMYVMVVGAFVVRTNQPPVIGVH

Query:  KIVDLSNFPDREAMWYLEVMEAYKMFYEPLIEEF
        KIVDLS  P+REAMWYLEVMEAYKMFYEPL+EEF
Subjt:  KIVDLSNFPDREAMWYLEVMEAYKMFYEPLIEEF

A0A6J1DF83 recQ-mediated genome instability protein 2 isoform X11.7e-5985.07Show/hide
Query:  MDYSLAALKLLCRQLKDARPTPSNNAAALGGILFQRVWLQGILVSVDKPNAKLILDDGTGTVEISLLRDFRLRNWNLGMYVMVVGAFVVRTNQPPVIGVH
        MDYSLAALK+LC QL  ARPTPS +AA LGGILFQR WLQGILVSVDK NA+L+LDDGTGTVE+SL RDFRLR WNLGMYVMVVGAFV+R N+PP+IGVH
Subjt:  MDYSLAALKLLCRQLKDARPTPSNNAAALGGILFQRVWLQGILVSVDKPNAKLILDDGTGTVEISLLRDFRLRNWNLGMYVMVVGAFVVRTNQPPVIGVH

Query:  KIVDLSNFPDREAMWYLEVMEAYKMFYEPLIEEF
        KIVDLS FP REAMWYLEVMEAYKMFYEPLIEEF
Subjt:  KIVDLSNFPDREAMWYLEVMEAYKMFYEPLIEEF

A0A6J1HLJ4 uncharacterized protein LOC111464675 isoform X14.7e-5782.96Show/hide
Query:  MDYSLAALKLLCRQLKDARPTPSNNAAALGGILFQRVWLQGILVSVDKPNAKLILDDGTGTVEISLLRDFRLRNWNLGMYVMVVGAFVVRTNQPPVIGVH
        MDYSLAALKLLCRQL DAR  PSNNAA LGGILFQR WLQGILV VD+ N KLILDDGTGTVE+SL  DFR R W+LGMYVMVVGA+VVRTN+P +I VH
Subjt:  MDYSLAALKLLCRQLKDARPTPSNNAAALGGILFQRVWLQGILVSVDKPNAKLILDDGTGTVEISLLRDFRLRNWNLGMYVMVVGAFVVRTNQPPVIGVH

Query:  KIVDLSNFPDREAMWYLEVMEAYKMFYEPLIEEFS
        KIVDLS FP REAMWYLEVMEAYKMFYEPL+EEFS
Subjt:  KIVDLSNFPDREAMWYLEVMEAYKMFYEPLIEEFS

A0A6J1I0C8 uncharacterized protein LOC1114693426.1e-5782.22Show/hide
Query:  MDYSLAALKLLCRQLKDARPTPSNNAAALGGILFQRVWLQGILVSVDKPNAKLILDDGTGTVEISLLRDFRLRNWNLGMYVMVVGAFVVRTNQPPVIGVH
        MDY+LAALKLLCRQL DAR  PSNNAA LGGILFQR WLQGILV VD+ N KLILDDGTGTVE+SL  DFR R W+LGMYVMVVGA+VVRTN+P +I VH
Subjt:  MDYSLAALKLLCRQLKDARPTPSNNAAALGGILFQRVWLQGILVSVDKPNAKLILDDGTGTVEISLLRDFRLRNWNLGMYVMVVGAFVVRTNQPPVIGVH

Query:  KIVDLSNFPDREAMWYLEVMEAYKMFYEPLIEEFS
        KIVDLS FP REAMWYLEVMEAYKMFYEPL+EEFS
Subjt:  KIVDLSNFPDREAMWYLEVMEAYKMFYEPLIEEFS

SwissProt top hitse value%identityAlignment
A5PJU7 RecQ-mediated genome instability protein 25.8e-0433.59Show/hide
Query:  LKLLCRQL-KDARPTPSN---NAAALG--GILFQRVWLQGILVSVDKPNAKLILDDGTGTVEISLLRDFRLRNWNL-GMYVMVVGAFVVRTNQP-PVIGV
        +K+L  QL +DA   P +   + AA+G   +  + VW+QG +V      A+L    G+ +V   L R  R R   + G YVMV+G  V++   P P +  
Subjt:  LKLLCRQL-KDARPTPSN---NAAALG--GILFQRVWLQGILVSVDKPNAKLILDDGTGTVEISLLRDFRLRNWNL-GMYVMVVGAFVVRTNQP-PVIGV

Query:  HKIVDLSNFPDREAMWYLEVMEAYKMFY
         K+ DLS+ P  E++W LEV + ++  Y
Subjt:  HKIVDLSNFPDREAMWYLEVMEAYKMFY

Q3UPE3 RecQ-mediated genome instability protein 25.8e-0434.38Show/hide
Query:  LAALKLLCRQL-KDARPTP-----SNNAAALGGILFQRVWLQGILVSVDKPNAKLILDDGTGTVEISLLRDFRLRNWNL-GMYVMVVGAFVVRTNQP-PV
        L  LK+L  QL + A   P     S  A     +    VW+QG +++ +   A+L    G  +V   L R  R R   L G YVMV+G  VV+   P P 
Subjt:  LAALKLLCRQL-KDARPTP-----SNNAAALGGILFQRVWLQGILVSVDKPNAKLILDDGTGTVEISLLRDFRLRNWNL-GMYVMVVGAFVVRTNQP-PV

Query:  IGVHKIVDLSNFPDREAMWYLEVMEAYK
        +   K+ DLS+ P  E+MW LEV + ++
Subjt:  IGVHKIVDLSNFPDREAMWYLEVMEAYK

Q5ZM20 RecQ-mediated genome instability protein 28.9e-0531.25Show/hide
Query:  LKLLCRQLKDARPTP------SNNAAALGGILFQRVWLQGILVSVDK-PNAKLILDDGTGTVEISLLRDFRLRN--WNLGMYVMVVGAFVVRTNQP-PVI
        LK+L  QL+ A          S        +  + VW+QG ++ V++       L DG+G   +  + D        + G YVMV+G  +VR   P PV+
Subjt:  LKLLCRQLKDARPTP------SNNAAALGGILFQRVWLQGILVSVDK-PNAKLILDDGTGTVEISLLRDFRLRN--WNLGMYVMVVGAFVVRTNQP-PVI

Query:  GVHKIVDLSNFPDREAMWYLEVMEAYKM
           K+ DLS  P  E MW LEV E +++
Subjt:  GVHKIVDLSNFPDREAMWYLEVMEAYKM

Q96E14 RecQ-mediated genome instability protein 23.6e-0637.6Show/hide
Query:  LKLLCRQL-KDARPTP-----SNNAAALGGILFQRVWLQGILVSVDKPNAKLILDDGTGTVEISLLRDFRLRNWNL-GMYVMVVGAFVVRTNQP-PVIGV
        LK+L  QL +DA   P     S  AA  G +    VW+QG +V  D+  A+L    G  +V   L R  R R   + G YVMV+G  VV+   P P +  
Subjt:  LKLLCRQL-KDARPTP-----SNNAAALGGILFQRVWLQGILVSVDKPNAKLILDDGTGTVEISLLRDFRLRNWNL-GMYVMVVGAFVVRTNQP-PVIGV

Query:  HKIVDLSNFPDREAMWYLEVMEAYK
         K+ DLS+ P  E+MW LEV + ++
Subjt:  HKIVDLSNFPDREAMWYLEVMEAYK

Arabidopsis top hitse value%identityAlignment
AT1G08390.1 unknown protein2.7e-4966.42Show/hide
Query:  MDYSLAALKLLCRQLKDARPTPSNNAAALGGILFQRVWLQGILVSVDKPNAK--LILDDGTGTVEISLLRDFRLRNWNLGMYVMVVGAFVVRTNQPPVIG
        MDYSLAA+K+LC QL+DA+PTPS NAA+LGG+LFQR WLQG+LV          L+LDDGTG +E+ L  DF LR W  GMYVMVVG + VRT Q P++ 
Subjt:  MDYSLAALKLLCRQLKDARPTPSNNAAALGGILFQRVWLQGILVSVDKPNAK--LILDDGTGTVEISLLRDFRLRNWNLGMYVMVVGAFVVRTNQPPVIG

Query:  VHKIVDLSNFPDREAMWYLEVMEAYKMFYEPLIEEFS
        VHK+VDLS  PDREAMWYLEVM+AY++FYEPLI+EFS
Subjt:  VHKIVDLSNFPDREAMWYLEVMEAYKMFYEPLIEEFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTATAGCTTAGCAGCGTTGAAGCTTCTGTGCCGGCAGCTGAAGGACGCCCGCCCAACTCCGTCCAACAACGCCGCCGCGCTCGGCGGCATTCTCTTCCAACGCGT
CTGGCTTCAGGGCATTTTGGTCTCCGTCGACAAACCCAATGCTAAGTTGATTCTCGACGACGGCACCGGCACCGTCGAAATCTCTCTCCTCCGCGACTTTCGTCTCCGCA
ATTGGAATCTCGGGATGTATGTCATGGTGGTCGGCGCTTTTGTCGTCCGGACGAATCAACCGCCGGTTATTGGGGTCCACAAGATTGTTGATCTTTCAAACTTTCCTGAC
CGGGAGGCAATGTGGTATCTTGAAGTCATGGAAGCATACAAAATGTTCTATGAACCTCTGATTGAAGAATTTTCCTAG
mRNA sequenceShow/hide mRNA sequence
GAGATATGGACTATAGCTTAGCAGCGTTGAAGCTTCTGTGCCGGCAGCTGAAGGACGCCCGCCCAACTCCGTCCAACAACGCCGCCGCGCTCGGCGGCATTCTCTTCCAA
CGCGTCTGGCTTCAGGGCATTTTGGTCTCCGTCGACAAACCCAATGCTAAGTTGATTCTCGACGACGGCACCGGCACCGTCGAAATCTCTCTCCTCCGCGACTTTCGTCT
CCGCAATTGGAATCTCGGGATGTATGTCATGGTGGTCGGCGCTTTTGTCGTCCGGACGAATCAACCGCCGGTTATTGGGGTCCACAAGATTGTTGATCTTTCAAACTTTC
CTGACCGGGAGGCAATGTGGTATCTTGAAGTCATGGAAGCATACAAAATGTTCTATGAACCTCTGATTGAAGAATTTTCCTAGACAGGTGATGTTTATTGATGTTCATCA
AGCAAAATGCATCAATGTTGTAAGGCCCACTAAAAGGTTTTTCTTTTGGTACTTATTTATATACTCCATTTGAAATTCAAGCTATTCATTGTTATGGCCATTTTTTCTTA
AGATCAGAGCTCTATATCATCTCCATTGAGAAAATGTACATAGATAAGGATGGGCAGTCTAAGAGAGCAAATTCTATTGCTTAGTCTGTCTTTGTTGATGCTTAAGAAAT
GGTAAGTAACAAAGTTTGATTGATTACCTTATCAGTCTTCTGCAATTTGTGCTCTCAATTATAGCTAGTTATGG
Protein sequenceShow/hide protein sequence
MDYSLAALKLLCRQLKDARPTPSNNAAALGGILFQRVWLQGILVSVDKPNAKLILDDGTGTVEISLLRDFRLRNWNLGMYVMVVGAFVVRTNQPPVIGVHKIVDLSNFPD
REAMWYLEVMEAYKMFYEPLIEEFS