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Sed0016205 (gene) of Chayote v1 genome

Gene IDSed0016205
OrganismSechium edule (Chayote v1)
DescriptionTranscription factor PAR1-like
Genome locationLG01:12149734..12150219
RNA-Seq ExpressionSed0016205
SyntenySed0016205
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055213.1 transcription factor PAR1-like [Cucumis melo var. makuwa]2.3e-2477.78Show/hide
Query:  MASPDLAANTSSSCHHNVAGSRVKRTRREAREVRRKVQKLRWVVPGARGLRQEHLFAKTARYILNLRLKVCALETILKLQG
        MA  DL AN+S  CHHNVA S  KR RREAREVRRKVQKLRWVVPG RGLR+EHLFA+TA YIL+L+LKVCALE++LKLQG
Subjt:  MASPDLAANTSSSCHHNVAGSRVKRTRREAREVRRKVQKLRWVVPGARGLRQEHLFAKTARYILNLRLKVCALETILKLQG

KAE8124179.1 hypothetical protein FH972_019086 [Carpinus fangiana]4.0e-0546.15Show/hide
Query:  ASPDLAANTSSSCHHNVAGSRVKRTRREAREVRRKVQKLRWVVPGARGLRQEHLFAKTARYILNLRLKVCALETILKL
        A  DL   +       V   R  R +R  R V+ KVQKL+ +VPG  GL+ ++LFA+TA YIL+LRL+V ALE++L+L
Subjt:  ASPDLAANTSSSCHHNVAGSRVKRTRREAREVRRKVQKLRWVVPGARGLRQEHLFAKTARYILNLRLKVCALETILKL

KAG6573044.1 Ubiquitin-conjugating enzyme E2 5, partial [Cucurbita argyrosperma subsp. sororia]3.3e-1564.56Show/hide
Query:  MASPDLAANTSSSCHHNVAGSRVKRTRREAREVRRKVQKLRWVVPGARGLRQEHLFAKTARYILNLRLKVCALETILKL
        MASPDL  N++SS + NVA SR+KR RREARE+RRKVQKLRWVV G R LR+EHLFAKTA YIL L   +     +L L
Subjt:  MASPDLAANTSSSCHHNVAGSRVKRTRREAREVRRKVQKLRWVVPGARGLRQEHLFAKTARYILNLRLKVCALETILKL

KAG6584233.1 hypothetical protein SDJN03_20165, partial [Cucurbita argyrosperma subsp. sororia]2.0e-2080.56Show/hide
Query:  SSCHHNVAGSRVKRTRREAREVRRKVQKLRWVVPGARGLRQEHLFAKTARYILNLRLKVCALETILKLQGEA
        SSCH NV    +KR RREAR+VRRKVQKLRWVVPG RGL+QEHLFAKTA YIL+LRLKVCAL+TILKLQ EA
Subjt:  SSCHHNVAGSRVKRTRREAREVRRKVQKLRWVVPGARGLRQEHLFAKTARYILNLRLKVCALETILKLQGEA

KAG7019830.1 hypothetical protein SDJN02_18794, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-2080.56Show/hide
Query:  SSCHHNVAGSRVKRTRREAREVRRKVQKLRWVVPGARGLRQEHLFAKTARYILNLRLKVCALETILKLQGEA
        SSCH NV    +KR RREAR+VRRKVQKLRWVVPG RGL+QEHLFAKTA YIL+LRLKVCAL+TILKLQ EA
Subjt:  SSCHHNVAGSRVKRTRREAREVRRKVQKLRWVVPGARGLRQEHLFAKTARYILNLRLKVCALETILKLQGEA

TrEMBL top hitse value%identityAlignment
A0A0A0LQU9 UBC core domain-containing protein2.5e-0575.61Show/hide
Query:  MASPDLAANTSSSCHHNVAGSRVKRTRREAREVRRKVQKLR
        MA  DL AN+SSSCHH+V  S +KR RREAREVRRKVQKLR
Subjt:  MASPDLAANTSSSCHHNVAGSRVKRTRREAREVRRKVQKLR

A0A438EHL0 BHLH domain-containing protein7.4e-0548.39Show/hide
Query:  VAGSRVKRTRREAREVRRKVQKLRWVVPGARGLRQEHLFAKTARYILNLRLKVCALETILKL
        ++G +++R RR  R VRRKV+KL+ ++PG RGL+ + LF +TA YIL+LRL+V  L+ + K+
Subjt:  VAGSRVKRTRREAREVRRKVQKLRWVVPGARGLRQEHLFAKTARYILNLRLKVCALETILKL

A0A438JND2 BHLH domain-containing protein7.4e-0548.39Show/hide
Query:  VAGSRVKRTRREAREVRRKVQKLRWVVPGARGLRQEHLFAKTARYILNLRLKVCALETILKL
        ++G +++R RR  R VRRKV+KL+ ++PG RGL+ + LF +TA YIL+LRL+V  L+ + K+
Subjt:  VAGSRVKRTRREAREVRRKVQKLRWVVPGARGLRQEHLFAKTARYILNLRLKVCALETILKL

A0A5A7UGX9 Transcription factor PAR1-like1.1e-2477.78Show/hide
Query:  MASPDLAANTSSSCHHNVAGSRVKRTRREAREVRRKVQKLRWVVPGARGLRQEHLFAKTARYILNLRLKVCALETILKLQG
        MA  DL AN+S  CHHNVA S  KR RREAREVRRKVQKLRWVVPG RGLR+EHLFA+TA YIL+L+LKVCALE++LKLQG
Subjt:  MASPDLAANTSSSCHHNVAGSRVKRTRREAREVRRKVQKLRWVVPGARGLRQEHLFAKTARYILNLRLKVCALETILKLQG

A0A5N6RR97 Uncharacterized protein2.0e-0546.15Show/hide
Query:  ASPDLAANTSSSCHHNVAGSRVKRTRREAREVRRKVQKLRWVVPGARGLRQEHLFAKTARYILNLRLKVCALETILKL
        A  DL   +       V   R  R +R  R V+ KVQKL+ +VPG  GL+ ++LFA+TA YIL+LRL+V ALE++L+L
Subjt:  ASPDLAANTSSSCHHNVAGSRVKRTRREAREVRRKVQKLRWVVPGARGLRQEHLFAKTARYILNLRLKVCALETILKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCACCAGATTTGGCAGCTAACACCAGTTCCTCTTGCCATCACAATGTGGCTGGTTCGAGGGTGAAGAGGACGAGAAGAGAAGCACGTGAGGTTCGTCGGAAAGT
TCAGAAGCTGCGGTGGGTGGTGCCGGGTGCCCGAGGGTTGCGACAGGAACATCTCTTTGCCAAGACGGCTCGTTACATATTGAATTTGAGATTGAAAGTCTGTGCTCTTG
AAACCATTCTGAAATTGCAGGGCGAGGCTTGA
mRNA sequenceShow/hide mRNA sequence
GTTTCTTCTAATGGCTTCACCAGATTTGGCAGCTAACACCAGTTCCTCTTGCCATCACAATGTGGCTGGTTCGAGGGTGAAGAGGACGAGAAGAGAAGCACGTGAGGTTC
GTCGGAAAGTTCAGAAGCTGCGGTGGGTGGTGCCGGGTGCCCGAGGGTTGCGACAGGAACATCTCTTTGCCAAGACGGCTCGTTACATATTGAATTTGAGATTGAAAGTC
TGTGCTCTTGAAACCATTCTGAAATTGCAGGGCGAGGCTTGACAATGTCTTATGATATCAACATTTTTCTCTGTTTATTTTTCTTTAATTTTGTTTCTGTGGATCTGGTT
GACATTGGAACAGGCATCTGATATTCGTAGTCACATTGTGGAATGTTTATTATATATTTATGTTATATACAGGTAGAAGCATCCATTTTTTTACTTTTTTCAAGCACAGT
TGGATTGACACAACTTCAACCTATTTTTGGATTCTATTGGAGATAC
Protein sequenceShow/hide protein sequence
MASPDLAANTSSSCHHNVAGSRVKRTRREAREVRRKVQKLRWVVPGARGLRQEHLFAKTARYILNLRLKVCALETILKLQGEA