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Sed0016212 (gene) of Chayote v1 genome

Gene IDSed0016212
OrganismSechium edule (Chayote v1)
DescriptionCASP-like protein
Genome locationLG03:513035..513968
RNA-Seq ExpressionSed0016212
SyntenySed0016212
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578706.1 hypothetical protein SDJN03_23154, partial [Cucurbita argyrosperma subsp. sororia]8.8e-1375Show/hide
Query:  MATIIIGAAFNLFQIALALYRLVTKTDDNILFNFYGDKILSYLLLLGAAATLGDGI
        MATIIIG AFNL QIALALYRL+TKTD  +LF+F+GDK+LSY LL GAAA LG  I
Subjt:  MATIIIGAAFNLFQIALALYRLVTKTDDNILFNFYGDKILSYLLLLGAAATLGDGI

KAG7016238.1 CASP-like protein 4D1, partial [Cucurbita argyrosperma subsp. argyrosperma]8.8e-1375Show/hide
Query:  MATIIIGAAFNLFQIALALYRLVTKTDDNILFNFYGDKILSYLLLLGAAATLGDGI
        MATIIIG AFNL QIALALYRL+TKTD  +LF+F+GDK+LSY LL GAAA LG  I
Subjt:  MATIIIGAAFNLFQIALALYRLVTKTDDNILFNFYGDKILSYLLLLGAAATLGDGI

XP_008458887.1 PREDICTED: CASP-like protein 4D1 [Cucumis melo]6.7e-1359.3Show/hide
Query:  MATIIIGAAFNLFQIALALYRLVTKTDDNILFNFYGDKILSYLLLLGAAATLGDGILYRCSTGATPLQLFFSYPFSALLSSLFIFL
        MATIIIG AFNL QIALALYRLVTKTD +ILF+FYGDK+LSY LL GAAA LG  +  + +     L  FF    +A    L  FL
Subjt:  MATIIIGAAFNLFQIALALYRLVTKTDDNILFNFYGDKILSYLLLLGAAATLGDGILYRCSTGATPLQLFFSYPFSALLSSLFIFL

XP_031741109.1 CASP-like protein 4D1 isoform X1 [Cucumis sativus]1.8e-1376.79Show/hide
Query:  MATIIIGAAFNLFQIALALYRLVTKTDDNILFNFYGDKILSYLLLLGAAATLGDGI
        MATII+G AFNL QIAL+LYRL+TKTD +ILF+FYGDKILSY+LL GAAA LG  I
Subjt:  MATIIIGAAFNLFQIALALYRLVTKTDDNILFNFYGDKILSYLLLLGAAATLGDGI

XP_038877615.1 CASP-like protein 4D1 [Benincasa hispida]6.1e-1478.57Show/hide
Query:  MATIIIGAAFNLFQIALALYRLVTKTDDNILFNFYGDKILSYLLLLGAAATLGDGI
        + TIIIG AFNL QIALALYRLVTKTD N+LF+FYGDK+LSY+LL GAAA LG GI
Subjt:  MATIIIGAAFNLFQIALALYRLVTKTDDNILFNFYGDKILSYLLLLGAAATLGDGI

TrEMBL top hitse value%identityAlignment
A0A0A0KU83 CASP-like protein5.4e-0845.88Show/hide
Query:  MATIIIGAAFNLFQIALALYRLVTKTDDNILFNFYGDKILSYLLLLGAAATLGDGILYRCSTGATPLQLFFSYPFSALLSSLFIF
        +ATIIIG  FNL QIA +L+ +V   D  ILF+F+GDK LSYLL  GAAA  G G+  +        ++FF   ++A    LF F
Subjt:  MATIIIGAAFNLFQIALALYRLVTKTDDNILFNFYGDKILSYLLLLGAAATLGDGILYRCSTGATPLQLFFSYPFSALLSSLFIF

A0A1S3C911 CASP-like protein3.2e-1359.3Show/hide
Query:  MATIIIGAAFNLFQIALALYRLVTKTDDNILFNFYGDKILSYLLLLGAAATLGDGILYRCSTGATPLQLFFSYPFSALLSSLFIFL
        MATIIIG AFNL QIALALYRLVTKTD +ILF+FYGDK+LSY LL GAAA LG  +  + +     L  FF    +A    L  FL
Subjt:  MATIIIGAAFNLFQIALALYRLVTKTDDNILFNFYGDKILSYLLLLGAAATLGDGILYRCSTGATPLQLFFSYPFSALLSSLFIFL

A0A6J1BZ60 CASP-like protein3.0e-1169.64Show/hide
Query:  MATIIIGAAFNLFQIALALYRLVTKTDDNILFNFYGDKILSYLLLLGAAATLGDGI
        MATIIIG AFNL QIAL+LY +++K+  N+LF FYGDK+LSY+LL GAAA LG GI
Subjt:  MATIIIGAAFNLFQIALALYRLVTKTDDNILFNFYGDKILSYLLLLGAAATLGDGI

A0A6J1FMS6 CASP-like protein1.2e-1273.21Show/hide
Query:  MATIIIGAAFNLFQIALALYRLVTKTDDNILFNFYGDKILSYLLLLGAAATLGDGI
        MATIIIG AFNL QIALALYRL+TK+D  +LF+F+GDK+LSY LL GAAA LG  I
Subjt:  MATIIIGAAFNLFQIALALYRLVTKTDDNILFNFYGDKILSYLLLLGAAATLGDGI

A0A6J1JYE7 CASP-like protein4.2e-1375Show/hide
Query:  MATIIIGAAFNLFQIALALYRLVTKTDDNILFNFYGDKILSYLLLLGAAATLGDGI
        MATIIIG AFNL QIALALYRL+TKTD  +LF+F+GDK+LSY LL GAAA LG  I
Subjt:  MATIIIGAAFNLFQIALALYRLVTKTDDNILFNFYGDKILSYLLLLGAAATLGDGI

SwissProt top hitse value%identityAlignment
A1XGB4 CASP-like protein PIMP11.8e-0547.37Show/hide
Query:  MATIIIGAAFNLFQIALALYRLVTKT----DDNILFNFYGDKILSYLLLLGAAATLG
        +AT+IIG A+ L QIA ++  L T      +  +LF+FYGDK +SY L+ GAAA+ G
Subjt:  MATIIIGAAFNLFQIALALYRLVTKT----DDNILFNFYGDKILSYLLLLGAAATLG

B9NBE5 CASP-like protein 4D19.1e-0542.37Show/hide
Query:  MATIIIGAAFNLFQIALALYRL------VTKTDDNILFNFYGDKILSYLLLLGAAATLG
        +A I  G  + + QIAL L  +       T  D N++F+FYGDK++SY+L  GAAA  G
Subjt:  MATIIIGAAFNLFQIALALYRL------VTKTDDNILFNFYGDKILSYLLLLGAAATLG

B9SXY8 CASP-like protein 4D12.8e-0647.27Show/hide
Query:  MATIIIGAAFNLFQIALALYRLVT-----KTDDNILFNFYGDKILSYLLLLGAAA
        +ATI+IG A+ + QIA  LY + T       D N+ F+F+GDK++SY+L+ GAAA
Subjt:  MATIIIGAAFNLFQIALALYRLVT-----KTDDNILFNFYGDKILSYLLLLGAAA

C6T1Z6 CASP-like protein 4D18.3e-0636.36Show/hide
Query:  MATIIIGAAFNLFQIALALYRLVT-----KTDDNILFNFYGDKILSYLLLLGAAA------TLGDGI---LYRCSTGATPLQLFFSYPFSALLSSLFIF
        ++TIIIG A+NL Q+AL+++ +V+       D   LF+F+GDKI+SYLL+ G+AA       LG G+    +     A+   L  ++ F+A+ S+   F
Subjt:  MATIIIGAAFNLFQIALALYRLVT-----KTDDNILFNFYGDKILSYLLLLGAAA------TLGDGI---LYRCSTGATPLQLFFSYPFSALLSSLFIF

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCATCATCATTGGAGCAGCATTCAACCTCTTTCAAATTGCATTAGCCCTTTATCGCCTCGTGACTAAAACCGACGACAATATTTTATTCAACTTCTATGGTGA
CAAGATATTGTCGTACTTGCTGCTTTTGGGAGCTGCGGCCACGCTGGGCGATGGCATTTTGTATCGATGTTCGACTGGGGCAACGCCGCTGCAGCTCTTTTTCTCCTATC
CTTTTTCTGCTCTGCTGTCGTCTCTGTTTATTTTCTTGCAAAATTCATACCACAAACTTTGTTCTTGCTCTTTTTATCAATTTTATTTGACTCTGGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACCATCATCATTGGAGCAGCATTCAACCTCTTTCAAATTGCATTAGCCCTTTATCGCCTCGTGACTAAAACCGACGACAATATTTTATTCAACTTCTATGGTGA
CAAGATATTGTCGTACTTGCTGCTTTTGGGAGCTGCGGCCACGCTGGGCGATGGCATTTTGTATCGATGTTCGACTGGGGCAACGCCGCTGCAGCTCTTTTTCTCCTATC
CTTTTTCTGCTCTGCTGTCGTCTCTGTTTATTTTCTTGCAAAATTCATACCACAAACTTTGTTCTTGCTCTTTTTATCAATTTTATTTGACTCTGGTGTGA
Protein sequenceShow/hide protein sequence
MATIIIGAAFNLFQIALALYRLVTKTDDNILFNFYGDKILSYLLLLGAAATLGDGILYRCSTGATPLQLFFSYPFSALLSSLFIFLQNSYHKLCSCSFYQFYLTLV