; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0016215 (gene) of Chayote v1 genome

Gene IDSed0016215
OrganismSechium edule (Chayote v1)
Descriptionzinc finger protein GIS2
Genome locationLG04:47175133..47177539
RNA-Seq ExpressionSed0016215
SyntenySed0016215
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148537.1 zinc finger protein GIS2 [Cucumis sativus]1.0e-13989.31Show/hide
Query:  MSSDSMSRSRSRSRSRSPLDRKIRSDRLSYRDAPYRRESRRGSSRDNLCKNCKRPGHFARECPNVAVCHNCNLPGHIASECSTKSLCWNCREPGHVASNC
        MSSD  SRSRSRSRSRSPLDRKIRSDR SYRDAPYRRESRRG SRDNLCKNCKRPGHFARECPNVA+CHNC LPGHIASEC+TKSLCWNCREPGH+AS+C
Subjt:  MSSDSMSRSRSRSRSRSPLDRKIRSDRLSYRDAPYRRESRRGSSRDNLCKNCKRPGHFARECPNVAVCHNCNLPGHIASECSTKSLCWNCREPGHVASNC

Query:  TNEGICHTCGKVGHRARECTAPPQPPGDLRLCHNCYKAGHLAADCTNEKACNNCRKTGHLARDCPNDPVCNLCNVSGHVSRQCPKSNVLGDRGDRGIGSG
         NEGICHTCGK GHRAR+CTAPP PPGDLRLC+NCYK GH+AADCTNEKACNNCRKTGHLARDCPNDP+CNLCNVSGHV+RQCPKSNVLGDRGDRGI SG
Subjt:  TNEGICHTCGKVGHRARECTAPPQPPGDLRLCHNCYKAGHLAADCTNEKACNNCRKTGHLARDCPNDPVCNLCNVSGHVSRQCPKSNVLGDRGDRGIGSG

Query:  GGSARG---GFRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYNRRF
        GGS RG   G+RDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFM+R+ RR+
Subjt:  GGSARG---GFRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYNRRF

XP_008448055.1 PREDICTED: zinc finger protein GIS2 [Cucumis melo]6.0e-14089.69Show/hide
Query:  MSSDSMSRSRSRSRSRSPLDRKIRSDRLSYRDAPYRRESRRGSSRDNLCKNCKRPGHFARECPNVAVCHNCNLPGHIASECSTKSLCWNCREPGHVASNC
        MSSD  SRSRSRSRSRSPLDRKIRSDR SYRDAPYRRESRRG SRDNLCKNCKRPGHFARECPNVA+CHNC LPGHIASEC+TKSLCWNCREPGH+AS+C
Subjt:  MSSDSMSRSRSRSRSRSPLDRKIRSDRLSYRDAPYRRESRRGSSRDNLCKNCKRPGHFARECPNVAVCHNCNLPGHIASECSTKSLCWNCREPGHVASNC

Query:  TNEGICHTCGKVGHRARECTAPPQPPGDLRLCHNCYKAGHLAADCTNEKACNNCRKTGHLARDCPNDPVCNLCNVSGHVSRQCPKSNVLGDRGDRGIGSG
         NEGICHTCGK GHRAR+CTAPP PPGDLRLC+NCYK GH+AADCTNEKACNNCRKTGHLARDCPNDP+CNLCNVSGHV+RQCPKSNVLGDRGDRGI SG
Subjt:  TNEGICHTCGKVGHRARECTAPPQPPGDLRLCHNCYKAGHLAADCTNEKACNNCRKTGHLARDCPNDPVCNLCNVSGHVSRQCPKSNVLGDRGDRGIGSG

Query:  GGSARG---GFRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYNRRF
        GGS RG   G+RDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFM+RY RR+
Subjt:  GGSARG---GFRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYNRRF

XP_022136056.1 zinc finger protein GIS2 [Momordica charantia]1.1e-13888.59Show/hide
Query:  MSSDSMSRSRSRSRSRSPLDRKIRSDRLSYRDAPYRRESRRGSSRDNLCKNCKRPGHFARECPNVAVCHNCNLPGHIASECSTKSLCWNCREPGHVASNC
        MSSD  SRSRSRSRSRSPLDRKIRSDR +YRDAPYRRESRRG SRDNLCKNCKRPGHFARECPNVA+CHNC LPGHIASEC+TKSLCWNCREPGH+A++C
Subjt:  MSSDSMSRSRSRSRSRSPLDRKIRSDRLSYRDAPYRRESRRGSSRDNLCKNCKRPGHFARECPNVAVCHNCNLPGHIASECSTKSLCWNCREPGHVASNC

Query:  TNEGICHTCGKVGHRARECTAPPQPPGDLRLCHNCYKAGHLAADCTNEKACNNCRKTGHLARDCPNDPVCNLCNVSGHVSRQCPKSNVLGDRGDRGIGSG
         NEGICHTCGK GHRARECTAPP PPGDLRLC+NCYK GH+AADCTNEKACNNCRKTGHLARDCPNDP+CNLCNVSGHV+RQCPKSN+L DR DRGIGSG
Subjt:  TNEGICHTCGKVGHRARECTAPPQPPGDLRLCHNCYKAGHLAADCTNEKACNNCRKTGHLARDCPNDPVCNLCNVSGHVSRQCPKSNVLGDRGDRGIGSG

Query:  GGSAR----GGFRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYNRRF
        GGS R    GG+RDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERY RR+
Subjt:  GGSAR----GGFRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYNRRF

XP_022971383.1 zinc finger protein GIS2-like [Cucurbita maxima]3.9e-13989.69Show/hide
Query:  MSSDSMSRSRSRSRSRSPLDRKIRSDRLSYRDAPYRRESRRGSSRDNLCKNCKRPGHFARECPNVAVCHNCNLPGHIASECSTKSLCWNCREPGHVASNC
        MSSD  SRSRSRSRSRSP+ RKIRSDR SYRDAPYRRESRRG SRDNLCKNCKRPGHFARECPNVA+CHNC LPGHIASEC+TKSLCWNCREPGHVAS+C
Subjt:  MSSDSMSRSRSRSRSRSPLDRKIRSDRLSYRDAPYRRESRRGSSRDNLCKNCKRPGHFARECPNVAVCHNCNLPGHIASECSTKSLCWNCREPGHVASNC

Query:  TNEGICHTCGKVGHRARECTAPPQPPGDLRLCHNCYKAGHLAADCTNEKACNNCRKTGHLARDCPNDPVCNLCNVSGHVSRQCPKSNVLGDRGDRGIGSG
        +NEGICHTCGK GHRARECTAPP PPGDLRLC+NCYK GH+AADCTNEKACNNCRKTGHLARDCPNDP+CNLCNVSGHV+RQCPKSNVLGDRGDRGIGSG
Subjt:  TNEGICHTCGKVGHRARECTAPPQPPGDLRLCHNCYKAGHLAADCTNEKACNNCRKTGHLARDCPNDPVCNLCNVSGHVSRQCPKSNVLGDRGDRGIGSG

Query:  GGSAR---GGFRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYNRRF
        GGS R   GG+RDVVCR CQQLGHMSRDCM PLMICHNCGGRGHLAYECPSGRFMERY RR+
Subjt:  GGSAR---GGFRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYNRRF

XP_038887879.1 zinc finger protein GIS2 [Benincasa hispida]1.6e-14089.69Show/hide
Query:  MSSDSMSRSRSRSRSRSPLDRKIRSDRLSYRDAPYRRESRRGSSRDNLCKNCKRPGHFARECPNVAVCHNCNLPGHIASECSTKSLCWNCREPGHVASNC
        MSSD  SRSRSRSRSRSPLDRKIRSDR SYRDAPYRRESRRG SRDNLCKNCKRPGHFARECPNVA+CHNC LPGHIASEC+TKSLCWNCREPGH+AS+C
Subjt:  MSSDSMSRSRSRSRSRSPLDRKIRSDRLSYRDAPYRRESRRGSSRDNLCKNCKRPGHFARECPNVAVCHNCNLPGHIASECSTKSLCWNCREPGHVASNC

Query:  TNEGICHTCGKVGHRARECTAPPQPPGDLRLCHNCYKAGHLAADCTNEKACNNCRKTGHLARDCPNDPVCNLCNVSGHVSRQCPKSNVLGDRGDRGIGSG
         NEGICHTCGK GHRAR+CTAPP PPGDLRLC+NCYK GH+AADCTNEKACNNCRKTGHLARDCPNDP+CNLCNVSGHV+RQCPKSNVLGDRGDRGIGSG
Subjt:  TNEGICHTCGKVGHRARECTAPPQPPGDLRLCHNCYKAGHLAADCTNEKACNNCRKTGHLARDCPNDPVCNLCNVSGHVSRQCPKSNVLGDRGDRGIGSG

Query:  GGSARG---GFRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYNRRF
        GGS RG   G+RDVVCRNCQQLGHMSRDCMGPL+ICHNCGGRGHLAYECPSGRFM+RY RR+
Subjt:  GGSARG---GFRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYNRRF

TrEMBL top hitse value%identityAlignment
A0A0A0K138 Uncharacterized protein5.0e-14089.31Show/hide
Query:  MSSDSMSRSRSRSRSRSPLDRKIRSDRLSYRDAPYRRESRRGSSRDNLCKNCKRPGHFARECPNVAVCHNCNLPGHIASECSTKSLCWNCREPGHVASNC
        MSSD  SRSRSRSRSRSPLDRKIRSDR SYRDAPYRRESRRG SRDNLCKNCKRPGHFARECPNVA+CHNC LPGHIASEC+TKSLCWNCREPGH+AS+C
Subjt:  MSSDSMSRSRSRSRSRSPLDRKIRSDRLSYRDAPYRRESRRGSSRDNLCKNCKRPGHFARECPNVAVCHNCNLPGHIASECSTKSLCWNCREPGHVASNC

Query:  TNEGICHTCGKVGHRARECTAPPQPPGDLRLCHNCYKAGHLAADCTNEKACNNCRKTGHLARDCPNDPVCNLCNVSGHVSRQCPKSNVLGDRGDRGIGSG
         NEGICHTCGK GHRAR+CTAPP PPGDLRLC+NCYK GH+AADCTNEKACNNCRKTGHLARDCPNDP+CNLCNVSGHV+RQCPKSNVLGDRGDRGI SG
Subjt:  TNEGICHTCGKVGHRARECTAPPQPPGDLRLCHNCYKAGHLAADCTNEKACNNCRKTGHLARDCPNDPVCNLCNVSGHVSRQCPKSNVLGDRGDRGIGSG

Query:  GGSARG---GFRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYNRRF
        GGS RG   G+RDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFM+R+ RR+
Subjt:  GGSARG---GFRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYNRRF

A0A1S3BIU7 zinc finger protein GIS22.9e-14089.69Show/hide
Query:  MSSDSMSRSRSRSRSRSPLDRKIRSDRLSYRDAPYRRESRRGSSRDNLCKNCKRPGHFARECPNVAVCHNCNLPGHIASECSTKSLCWNCREPGHVASNC
        MSSD  SRSRSRSRSRSPLDRKIRSDR SYRDAPYRRESRRG SRDNLCKNCKRPGHFARECPNVA+CHNC LPGHIASEC+TKSLCWNCREPGH+AS+C
Subjt:  MSSDSMSRSRSRSRSRSPLDRKIRSDRLSYRDAPYRRESRRGSSRDNLCKNCKRPGHFARECPNVAVCHNCNLPGHIASECSTKSLCWNCREPGHVASNC

Query:  TNEGICHTCGKVGHRARECTAPPQPPGDLRLCHNCYKAGHLAADCTNEKACNNCRKTGHLARDCPNDPVCNLCNVSGHVSRQCPKSNVLGDRGDRGIGSG
         NEGICHTCGK GHRAR+CTAPP PPGDLRLC+NCYK GH+AADCTNEKACNNCRKTGHLARDCPNDP+CNLCNVSGHV+RQCPKSNVLGDRGDRGI SG
Subjt:  TNEGICHTCGKVGHRARECTAPPQPPGDLRLCHNCYKAGHLAADCTNEKACNNCRKTGHLARDCPNDPVCNLCNVSGHVSRQCPKSNVLGDRGDRGIGSG

Query:  GGSARG---GFRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYNRRF
        GGS RG   G+RDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFM+RY RR+
Subjt:  GGSARG---GFRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYNRRF

A0A6J1C2F8 zinc finger protein GIS25.5e-13988.59Show/hide
Query:  MSSDSMSRSRSRSRSRSPLDRKIRSDRLSYRDAPYRRESRRGSSRDNLCKNCKRPGHFARECPNVAVCHNCNLPGHIASECSTKSLCWNCREPGHVASNC
        MSSD  SRSRSRSRSRSPLDRKIRSDR +YRDAPYRRESRRG SRDNLCKNCKRPGHFARECPNVA+CHNC LPGHIASEC+TKSLCWNCREPGH+A++C
Subjt:  MSSDSMSRSRSRSRSRSPLDRKIRSDRLSYRDAPYRRESRRGSSRDNLCKNCKRPGHFARECPNVAVCHNCNLPGHIASECSTKSLCWNCREPGHVASNC

Query:  TNEGICHTCGKVGHRARECTAPPQPPGDLRLCHNCYKAGHLAADCTNEKACNNCRKTGHLARDCPNDPVCNLCNVSGHVSRQCPKSNVLGDRGDRGIGSG
         NEGICHTCGK GHRARECTAPP PPGDLRLC+NCYK GH+AADCTNEKACNNCRKTGHLARDCPNDP+CNLCNVSGHV+RQCPKSN+L DR DRGIGSG
Subjt:  TNEGICHTCGKVGHRARECTAPPQPPGDLRLCHNCYKAGHLAADCTNEKACNNCRKTGHLARDCPNDPVCNLCNVSGHVSRQCPKSNVLGDRGDRGIGSG

Query:  GGSAR----GGFRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYNRRF
        GGS R    GG+RDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERY RR+
Subjt:  GGSAR----GGFRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYNRRF

A0A6J1EYM8 zinc finger protein GIS2-like7.2e-13988.97Show/hide
Query:  MSSDSMSRSRSRSRSRSPLDRKIRSDRLSYRDAPYRRESRRGSSRDNLCKNCKRPGHFARECPNVAVCHNCNLPGHIASECSTKSLCWNCREPGHVASNC
        MSSD  SRSRSRSRSRSP+ RKIRSDR SYRDAPYRRESRRG SRDNLCKNCKRPGHFARECPNVA+CHNC LPGHIASEC+TKSLCWNCREPGHVAS+C
Subjt:  MSSDSMSRSRSRSRSRSPLDRKIRSDRLSYRDAPYRRESRRGSSRDNLCKNCKRPGHFARECPNVAVCHNCNLPGHIASECSTKSLCWNCREPGHVASNC

Query:  TNEGICHTCGKVGHRARECTAPPQPPGDLRLCHNCYKAGHLAADCTNEKACNNCRKTGHLARDCPNDPVCNLCNVSGHVSRQCPKSNVLGDRGDRGIGSG
        +NEGICHTCGK GHRARECTAPP PPGDLRLC+NCYK GH+AADCTNEKACNNCRKTGHLARDCPNDP+CNLCNVSGHV+RQCPKSNVLG+RGDRGIGSG
Subjt:  TNEGICHTCGKVGHRARECTAPPQPPGDLRLCHNCYKAGHLAADCTNEKACNNCRKTGHLARDCPNDPVCNLCNVSGHVSRQCPKSNVLGDRGDRGIGSG

Query:  GGSAR----GGFRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYNRRF
        GGS R    GG+RDVVCR CQQLGHMSRDCM PLMICHNCGGRGHLAYECPSGRFMERY RR+
Subjt:  GGSAR----GGFRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYNRRF

A0A6J1I6P4 zinc finger protein GIS2-like1.9e-13989.69Show/hide
Query:  MSSDSMSRSRSRSRSRSPLDRKIRSDRLSYRDAPYRRESRRGSSRDNLCKNCKRPGHFARECPNVAVCHNCNLPGHIASECSTKSLCWNCREPGHVASNC
        MSSD  SRSRSRSRSRSP+ RKIRSDR SYRDAPYRRESRRG SRDNLCKNCKRPGHFARECPNVA+CHNC LPGHIASEC+TKSLCWNCREPGHVAS+C
Subjt:  MSSDSMSRSRSRSRSRSPLDRKIRSDRLSYRDAPYRRESRRGSSRDNLCKNCKRPGHFARECPNVAVCHNCNLPGHIASECSTKSLCWNCREPGHVASNC

Query:  TNEGICHTCGKVGHRARECTAPPQPPGDLRLCHNCYKAGHLAADCTNEKACNNCRKTGHLARDCPNDPVCNLCNVSGHVSRQCPKSNVLGDRGDRGIGSG
        +NEGICHTCGK GHRARECTAPP PPGDLRLC+NCYK GH+AADCTNEKACNNCRKTGHLARDCPNDP+CNLCNVSGHV+RQCPKSNVLGDRGDRGIGSG
Subjt:  TNEGICHTCGKVGHRARECTAPPQPPGDLRLCHNCYKAGHLAADCTNEKACNNCRKTGHLARDCPNDPVCNLCNVSGHVSRQCPKSNVLGDRGDRGIGSG

Query:  GGSAR---GGFRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYNRRF
        GGS R   GG+RDVVCR CQQLGHMSRDCM PLMICHNCGGRGHLAYECPSGRFMERY RR+
Subjt:  GGSAR---GGFRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYNRRF

SwissProt top hitse value%identityAlignment
O42395 Cellular nucleic acid-binding protein1.7e-2031.91Show/hide
Query:  NLCKNCKRPGHFARECP-NVAVCHNCNLPGHIASECSTKSL---CWNCREPGHVASNC--TNEGICHTCGKVGHRARECTAPPQPPGDLRLCHNCYKAGH
        N C  C R GH+ARECP  +         G    +  + SL   C+ C E GH+A +C    +  C+ CG+ GH A++C  P +     + C+NC K GH
Subjt:  NLCKNCKRPGHFARECP-NVAVCHNCNLPGHIASECSTKSL---CWNCREPGHVASNC--TNEGICHTCGKVGHRARECTAPPQPPGDLRLCHNCYKAGH

Query:  LAADC--TNEKACNNCRKTGHLARDCPNDPVCNLCNVSGHVSRQCPKSNVLGDRGDRGIGSGGGSARGGFRDVVCRNCQQLGHMSRDC
        LA DC   +E+ C +C + GH+ +DC     C  C  +GHV+  C K++                      +V C  C + GH++R+C
Subjt:  LAADC--TNEKACNNCRKTGHLARDCPNDPVCNLCNVSGHVSRQCPKSNVLGDRGDRGIGSGGGSARGGFRDVVCRNCQQLGHMSRDC

P36627 Cellular nucleic acid-binding protein homolog5.8e-2131.18Show/hide
Query:  CHNCNLPGHIASECSTKSLCWNCREPGHVASNCT---NEGICHTCGKVGHRARECTAPPQPPGDLRLCHNCYKAGHLAADCTNEKACNNCRKTGHLARDC
        C+NC   GH A EC+  S+C+NC + GH AS CT    E  C+ CG  GH  R+C + P P      C+ C + GH+A DC      +  R  GH     
Subjt:  CHNCNLPGHIASECSTKSLCWNCREPGHVASNCT---NEGICHTCGKVGHRARECTAPPQPPGDLRLCHNCYKAGHLAADCTNEKACNNCRKTGHLARDC

Query:  PNDPVCNLCNVSGHVSRQCPKSNVLGDRGDRGIGSGGGSARGGFRDVVCRNCQQLGHMSRDCM--GPLMICHNCGGRGHLAYECPS
         ++  C  C   GH +R C                           V C +C ++GH S +C       +C+ C   GH+A  C S
Subjt:  PNDPVCNLCNVSGHVSRQCPKSNVLGDRGDRGIGSGGGSARGGFRDVVCRNCQQLGHMSRDCM--GPLMICHNCGGRGHLAYECPS

P53849 Zinc finger protein GIS24.2e-2738.26Show/hide
Query:  CKNCKRPGHFARECPNVAVCHNCNLPGHIASECSTK-----SLCWNCREPGHVASNCTNEGICHTCGKVGHRARECTAPPQPPGDLRL-CHNCYKAGHLA
        C  C + GH A +C +  +C+NCN PGH+ ++C+         C+NC E GHV S CT +  C  C + GH +REC  P +     ++ C+ C    H+A
Subjt:  CKNCKRPGHFARECPNVAVCHNCNLPGHIASECSTK-----SLCWNCREPGHVASNCTNEGICHTCGKVGHRARECTAPPQPPGDLRL-CHNCYKAGHLA

Query:  ADCTNEKA-----CNNCRKTGHLARDCPNDPVCNLCNVSGHVSRQCPKS
         DC  E       C  C + GH++RDC ND +C  CN +GH+S+ CPK+
Subjt:  ADCTNEKA-----CNNCRKTGHLARDCPNDPVCNLCNVSGHVSRQCPKS

P62633 Cellular nucleic acid-binding protein1.9e-1931.09Show/hide
Query:  NLCKNCKRPGHFARECPNVAVCHN----------CNLPGHIASECSTKSLCWNCREPGHVASNC-TNEGICHTCGKVGHRARECTAPPQPPGDLRLCHNC
        N C  C R GH+ARECP                  +  G      S   +C+ C E GH+A +C   E  C+ CG+ GH A++C  P +     + C+NC
Subjt:  NLCKNCKRPGHFARECPNVAVCHN----------CNLPGHIASECSTKSLCWNCREPGHVASNC-TNEGICHTCGKVGHRARECTAPPQPPGDLRLCHNC

Query:  YKAGHLAADC--TNEKACNNCRKTGHLARDCPNDPVCNLCNVSGHVSRQCPKSNVLGDRGDRGIGSGGGSARGGFRDVVCRNCQQLGHMSRDC
         K GHLA DC   +E+ C +C + GH+ +DC     C  C  +GHV+  C K++                      +V C  C + GH++R+C
Subjt:  YKAGHLAADC--TNEKACNNCRKTGHLARDCPNDPVCNLCNVSGHVSRQCPKSNVLGDRGDRGIGSGGGSARGGFRDVVCRNCQQLGHMSRDC

Q3T0Q6 Cellular nucleic acid-binding protein3.8e-2032.26Show/hide
Query:  NLCKNCKRPGHFARECP---NVAVCHNCNLPGHIASECSTKSLCWNCREPGHVASNC-TNEGICHTCGKVGHRARECTAPPQPPGDLRLCHNCYKAGHLA
        N C  C R GH+ARECP              G      S   +C+ C E GH+A +C   E  C+ CG+ GH A++C  P +     + C+NC K GHLA
Subjt:  NLCKNCKRPGHFARECP---NVAVCHNCNLPGHIASECSTKSLCWNCREPGHVASNC-TNEGICHTCGKVGHRARECTAPPQPPGDLRLCHNCYKAGHLA

Query:  ADC--TNEKACNNCRKTGHLARDCPNDPVCNLCNVSGHVSRQCPKSNVLGDRGDRGIGSGGGSARGGFRDVVCRNCQQLGHMSRDC
         DC   +E+ C +C + GH+ +DC     C  C  +GHV+  C K++                      +V C  C + GH++R+C
Subjt:  ADC--TNEKACNNCRKTGHLARDCPNDPVCNLCNVSGHVSRQCPKSNVLGDRGDRGIGSGGGSARGGFRDVVCRNCQQLGHMSRDC

Arabidopsis top hitse value%identityAlignment
AT1G75560.1 zinc knuckle (CCHC-type) family protein1.9e-9162.96Show/hide
Query:  MSSDSMSRSRSRS------RSRSPLDRKIRSDRLSYRDAPYR--RESRRGSSRDNLCKNCKRPGHFARECPNVAVCHNCNLPGHIASECSTKSLCWNCRE
        MSS S SRSRSRS      RSRSP DR++RS+R+SY DAP R  RE RR  S+ NLC NCKRPGHFAR+C NV+VC+NC LPGHIA+EC+ +S CWNCRE
Subjt:  MSSDSMSRSRSRS------RSRSPLDRKIRSDRLSYRDAPYR--RESRRGSSRDNLCKNCKRPGHFARECPNVAVCHNCNLPGHIASECSTKSLCWNCRE

Query:  PGHVASNCTNEGICHTCGKVGHRARECTAPPQPPGDLRLCHNCYKAGHLAADCTNEKACNNCRKTGHLARDCPNDPVCNLCNVSGHVSRQCPKSNV-LGD
        PGHVASNC+NEGICH+CGK GHRAR+C+      GDLRLC+NC+K GHLAADCTN+KAC NCR +GH+ARDC NDPVCN+C++SGHV+R CPK +    D
Subjt:  PGHVASNCTNEGICHTCGKVGHRARECTAPPQPPGDLRLCHNCYKAGHLAADCTNEKACNNCRKTGHLARDCPNDPVCNLCNVSGHVSRQCPKSNV-LGD

Query:  RGDRGIGSGGGSARGGFRDVVCRNCQQLGHMSRDCMG--PLMICHNCGGRGHLAYECPSGRFMERYNRRF
        RG R     GG  RGG           L  MSRD  G   ++ICHNCGGRGH AYECPS R  +R  RR+
Subjt:  RGDRGIGSGGGSARGGFRDVVCRNCQQLGHMSRDCMG--PLMICHNCGGRGHLAYECPSGRFMERYNRRF

AT1G75560.2 zinc knuckle (CCHC-type) family protein1.9e-9162.96Show/hide
Query:  MSSDSMSRSRSRS------RSRSPLDRKIRSDRLSYRDAPYR--RESRRGSSRDNLCKNCKRPGHFARECPNVAVCHNCNLPGHIASECSTKSLCWNCRE
        MSS S SRSRSRS      RSRSP DR++RS+R+SY DAP R  RE RR  S+ NLC NCKRPGHFAR+C NV+VC+NC LPGHIA+EC+ +S CWNCRE
Subjt:  MSSDSMSRSRSRS------RSRSPLDRKIRSDRLSYRDAPYR--RESRRGSSRDNLCKNCKRPGHFARECPNVAVCHNCNLPGHIASECSTKSLCWNCRE

Query:  PGHVASNCTNEGICHTCGKVGHRARECTAPPQPPGDLRLCHNCYKAGHLAADCTNEKACNNCRKTGHLARDCPNDPVCNLCNVSGHVSRQCPKSNV-LGD
        PGHVASNC+NEGICH+CGK GHRAR+C+      GDLRLC+NC+K GHLAADCTN+KAC NCR +GH+ARDC NDPVCN+C++SGHV+R CPK +    D
Subjt:  PGHVASNCTNEGICHTCGKVGHRARECTAPPQPPGDLRLCHNCYKAGHLAADCTNEKACNNCRKTGHLARDCPNDPVCNLCNVSGHVSRQCPKSNV-LGD

Query:  RGDRGIGSGGGSARGGFRDVVCRNCQQLGHMSRDCMG--PLMICHNCGGRGHLAYECPSGRFMERYNRRF
        RG R     GG  RGG           L  MSRD  G   ++ICHNCGGRGH AYECPS R  +R  RR+
Subjt:  RGDRGIGSGGGSARGGFRDVVCRNCQQLGHMSRDCMG--PLMICHNCGGRGHLAYECPSGRFMERYNRRF

AT2G17870.1 cold shock domain protein 39.9e-1631.22Show/hide
Query:  CHNCNLPGHIASECSTKSLCWNCREPGHVASNCTNEGICHTCGKVGHRARECTA-----PPQPPGDLRLCHNCYKAGHLAADC----------------T
        C NC   GH+A +C   S   +    G   S    EG C+ CG VGH AR+C            G  R C++C + GHLA DC                +
Subjt:  CHNCNLPGHIASECSTKSLCWNCREPGHVASNCTNEGICHTCGKVGHRARECTA-----PPQPPGDLRLCHNCYKAGHLAADC----------------T

Query:  NEKACNNCRKTGHLARDCPND---------PVCNLCNVSGHVSRQCPKSNVLGDRGDRGIGSGGGSARGGFRDVVCRNCQQLGHMSRDC----------M
            C  C   GH ARDC  +           C  C   GH+++ C             I SGGG   GG R   C  C   GH++RDC           
Subjt:  NEKACNNCRKTGHLARDCPND---------PVCNLCNVSGHVSRQCPKSNVLGDRGDRGIGSGGGSARGGFRDVVCRNCQQLGHMSRDC----------M

Query:  GPLMICHNCGGRGHLAYECPS
        G    C  CG  GH A EC S
Subjt:  GPLMICHNCGGRGHLAYECPS

AT3G42860.1 zinc knuckle (CCHC-type) family protein2.1e-1033.33Show/hide
Query:  CHNCNLPGHIASECSTKSLCWNCREPGHVASNCTNEGICHTCGKVGHRARECTA----PPQPPGDLRL------CHNCYKAGHLAADCTNEKACNNCRKT
        C+ C   GH A +C+ +S      + G V S  +  G C  CGK GH +R+CTA    P   PG ++       C+ C K GH + DCT + + N   ++
Subjt:  CHNCNLPGHIASECSTKSLCWNCREPGHVASNCTNEGICHTCGKVGHRARECTA----PPQPPGDLRL------CHNCYKAGHLAADCTNEKACNNCRKT

Query:  GHLARDCPNDPVCNLCNVSGHVSRQC
        G  A+   +   C  C  +GH SR C
Subjt:  GHLARDCPNDPVCNLCNVSGHVSRQC

AT4G36020.1 cold shock domain protein 13.9e-2030.74Show/hide
Query:  NLCKNCKRPGHFARECPNVAVCHNCNLPGHIASECST-------------KSLCWNCREPGHVASNCTNEGI-------------CHTCGKVGHRARECT
        +L K     G+ AR     + C+NC   GHI+ +C                  C+NC + GH A +CT+ G              C+TCG VGH AR+CT
Subjt:  NLCKNCKRPGHFARECPNVAVCHNCNLPGHIASECST-------------KSLCWNCREPGHVASNCTNEGI-------------CHTCGKVGHRARECT

Query:  APPQPPGDLR--------LCHNCYKAGHLAADCTNEKA-------------CNNCRKTGHLARDCPN----DPVCNLCNVSGHVSRQCPKSNVLGDRGDR
              GD R         C+ C   GH A DCT + A             C +C   GH+ARDC         C  C  SGH++R C +          
Subjt:  APPQPPGDLR--------LCHNCYKAGHLAADCTNEKA-------------CNNCRKTGHLARDCPN----DPVCNLCNVSGHVSRQCPKSNVLGDRGDR

Query:  GIGSGGGSARGGFRDVVCRNCQQLGHMSRDC
          GSGGG       D  C  C + GH +R+C
Subjt:  GIGSGGGSARGGFRDVVCRNCQQLGHMSRDC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCAGATAGCATGAGTCGGAGCAGGAGCAGGAGCAGGAGCAGGAGTCCACTGGATCGTAAGATCCGGTCTGATCGTCTTTCATATCGTGATGCACCATACAGGAG
AGAGTCCCGTCGGGGTTCCAGTCGAGACAATCTTTGCAAGAACTGCAAGCGGCCGGGCCATTTTGCAAGAGAATGCCCCAATGTCGCAGTTTGTCACAACTGTAATCTTC
CTGGGCATATTGCTTCAGAGTGCTCAACAAAGTCACTGTGTTGGAATTGTCGAGAACCGGGTCACGTGGCAAGTAACTGTACCAATGAAGGCATCTGCCACACCTGTGGT
AAGGTGGGACATCGAGCCAGGGAATGCACCGCTCCTCCGCAGCCACCTGGGGACTTGAGGCTTTGTCACAATTGCTATAAGGCAGGTCATTTAGCAGCTGATTGTACTAA
TGAGAAGGCATGCAACAATTGCAGGAAGACAGGCCATCTTGCTCGTGATTGTCCAAACGACCCTGTTTGCAACCTGTGTAATGTATCAGGGCATGTGTCTAGACAGTGCC
CAAAGTCCAATGTCCTTGGAGACCGGGGAGACCGAGGCATTGGCAGCGGCGGTGGTAGTGCACGTGGCGGCTTCCGGGATGTTGTGTGTAGGAACTGCCAGCAGCTTGGC
CATATGAGTAGGGATTGTATGGGCCCTTTGATGATTTGTCACAACTGCGGGGGACGCGGTCACCTGGCATATGAATGCCCTTCAGGTCGGTTTATGGAGCGTTATAACAG
GAGGTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCAGATAGCATGAGTCGGAGCAGGAGCAGGAGCAGGAGCAGGAGTCCACTGGATCGTAAGATCCGGTCTGATCGTCTTTCATATCGTGATGCACCATACAGGAG
AGAGTCCCGTCGGGGTTCCAGTCGAGACAATCTTTGCAAGAACTGCAAGCGGCCGGGCCATTTTGCAAGAGAATGCCCCAATGTCGCAGTTTGTCACAACTGTAATCTTC
CTGGGCATATTGCTTCAGAGTGCTCAACAAAGTCACTGTGTTGGAATTGTCGAGAACCGGGTCACGTGGCAAGTAACTGTACCAATGAAGGCATCTGCCACACCTGTGGT
AAGGTGGGACATCGAGCCAGGGAATGCACCGCTCCTCCGCAGCCACCTGGGGACTTGAGGCTTTGTCACAATTGCTATAAGGCAGGTCATTTAGCAGCTGATTGTACTAA
TGAGAAGGCATGCAACAATTGCAGGAAGACAGGCCATCTTGCTCGTGATTGTCCAAACGACCCTGTTTGCAACCTGTGTAATGTATCAGGGCATGTGTCTAGACAGTGCC
CAAAGTCCAATGTCCTTGGAGACCGGGGAGACCGAGGCATTGGCAGCGGCGGTGGTAGTGCACGTGGCGGCTTCCGGGATGTTGTGTGTAGGAACTGCCAGCAGCTTGGC
CATATGAGTAGGGATTGTATGGGCCCTTTGATGATTTGTCACAACTGCGGGGGACGCGGTCACCTGGCATATGAATGCCCTTCAGGTCGGTTTATGGAGCGTTATAACAG
GAGGTTCTGA
Protein sequenceShow/hide protein sequence
MSSDSMSRSRSRSRSRSPLDRKIRSDRLSYRDAPYRRESRRGSSRDNLCKNCKRPGHFARECPNVAVCHNCNLPGHIASECSTKSLCWNCREPGHVASNCTNEGICHTCG
KVGHRARECTAPPQPPGDLRLCHNCYKAGHLAADCTNEKACNNCRKTGHLARDCPNDPVCNLCNVSGHVSRQCPKSNVLGDRGDRGIGSGGGSARGGFRDVVCRNCQQLG
HMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYNRRF