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Sed0016232 (gene) of Chayote v1 genome

Gene IDSed0016232
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG04:37818810..37819040
RNA-Seq ExpressionSed0016232
SyntenySed0016232
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066754.1 hypothetical protein E6C27_scaffold271G00930 [Cucumis melo var. makuwa]1.1e-1468.35Show/hide
Query:  MASKKFTIVALFLVLALVLCQARMSFGIRSLHNKNLNGASMEAVGVDV---LLGALPRGPTPPSAPSERGNPAPFSGGD
        M S+KF +VAL LV+A VLCQA MS GIR L NK +    M  +GVDV   LLGALP+GPTPPSAPSERGNPAPFS GD
Subjt:  MASKKFTIVALFLVLALVLCQARMSFGIRSLHNKNLNGASMEAVGVDV---LLGALPRGPTPPSAPSERGNPAPFSGGD

KAG6607932.1 hypothetical protein SDJN03_01274, partial [Cucurbita argyrosperma subsp. sororia]5.9e-1157.33Show/hide
Query:  MASKKFTIVALFLVLALVLCQARMSFGIRSLHNKNLNGASMEAVGVDVLLGALPRGPTPPSAPSERGNPAPFSGG
        M +KKFT+ A  L LA +LCQ   +  IRS ++K+    SM  V  D+LLG+LPRGP PPSAPS R NPAPFSGG
Subjt:  MASKKFTIVALFLVLALVLCQARMSFGIRSLHNKNLNGASMEAVGVDVLLGALPRGPTPPSAPSERGNPAPFSGG

KGN55050.1 hypothetical protein Csa_012928 [Cucumis sativus]4.4e-1468.35Show/hide
Query:  MASKKFTIVALFLVLALVLCQARMSFGIRSLHNKNLNGASMEAVGVDV---LLGALPRGPTPPSAPSERGNPAPFSGGD
        M SKK  +VAL LV+ALVL QA MS GIR L NK +    M  +GVDV   LLGALP+GPTPPSAPSERGNPAPFS GD
Subjt:  MASKKFTIVALFLVLALVLCQARMSFGIRSLHNKNLNGASMEAVGVDV---LLGALPRGPTPPSAPSERGNPAPFSGGD

TrEMBL top hitse value%identityAlignment
A0A0A0KZH3 Uncharacterized protein2.1e-1468.35Show/hide
Query:  MASKKFTIVALFLVLALVLCQARMSFGIRSLHNKNLNGASMEAVGVDV---LLGALPRGPTPPSAPSERGNPAPFSGGD
        M SKK  +VAL LV+ALVL QA MS GIR L NK +    M  +GVDV   LLGALP+GPTPPSAPSERGNPAPFS GD
Subjt:  MASKKFTIVALFLVLALVLCQARMSFGIRSLHNKNLNGASMEAVGVDV---LLGALPRGPTPPSAPSERGNPAPFSGGD

A0A5A7VHE0 Uncharacterized protein5.5e-1568.35Show/hide
Query:  MASKKFTIVALFLVLALVLCQARMSFGIRSLHNKNLNGASMEAVGVDV---LLGALPRGPTPPSAPSERGNPAPFSGGD
        M S+KF +VAL LV+A VLCQA MS GIR L NK +    M  +GVDV   LLGALP+GPTPPSAPSERGNPAPFS GD
Subjt:  MASKKFTIVALFLVLALVLCQARMSFGIRSLHNKNLNGASMEAVGVDV---LLGALPRGPTPPSAPSERGNPAPFSGGD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAGCAAAAAGTTCACAATTGTGGCATTATTCTTGGTGTTGGCCTTGGTGTTGTGCCAAGCTCGCATGAGCTTCGGAATTAGGAGCTTGCACAACAAAAACTTGAA
CGGGGCTTCGATGGAGGCGGTCGGCGTCGACGTGCTGCTCGGTGCTCTTCCGAGAGGCCCGACGCCGCCTTCTGCCCCAAGCGAGCGGGGCAATCCTGCTCCCTTTAGTG
GTGGGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAGCAAAAAGTTCACAATTGTGGCATTATTCTTGGTGTTGGCCTTGGTGTTGTGCCAAGCTCGCATGAGCTTCGGAATTAGGAGCTTGCACAACAAAAACTTGAA
CGGGGCTTCGATGGAGGCGGTCGGCGTCGACGTGCTGCTCGGTGCTCTTCCGAGAGGCCCGACGCCGCCTTCTGCCCCAAGCGAGCGGGGCAATCCTGCTCCCTTTAGTG
GTGGGGATTGA
Protein sequenceShow/hide protein sequence
MASKKFTIVALFLVLALVLCQARMSFGIRSLHNKNLNGASMEAVGVDVLLGALPRGPTPPSAPSERGNPAPFSGGD