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Sed0016253 (gene) of Chayote v1 genome

Gene IDSed0016253
OrganismSechium edule (Chayote v1)
DescriptionLate embryogenesis abundant protein
Genome locationLG14:20594463..20596047
RNA-Seq ExpressionSed0016253
SyntenySed0016253
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008441122.1 PREDICTED: uncharacterized protein LOC103485350 [Cucumis melo]2.0e-3569.63Show/hide
Query:  MINALRFCRAPPPSVCTTPLPPQLRRG-SSPELRFRRIIGFATAPDQNP--ENMDDSKNTAKETGDIMSHSFGEGYATRSDEEGFGGICGGNRSNDDTD-
        MINA+RF R PPP V T+PLPPQLRR   S ELR R+  GFATAPDQNP  E MD+S+N  KETGDIM  SFGEGYATRS+EEGFGG  GGN  +DD + 
Subjt:  MINALRFCRAPPPSVCTTPLPPQLRRG-SSPELRFRRIIGFATAPDQNP--ENMDDSKNTAKETGDIMSHSFGEGYATRSDEEGFGGICGGNRSNDDTD-

Query:  -ANKKSVIHENHPEYDKSQGSEVKEKEKSRHQTHA
          NKKSV   N  EYD+SQGSEVKEKEKSRHQ HA
Subjt:  -ANKKSVIHENHPEYDKSQGSEVKEKEKSRHQTHA

XP_011658492.1 uncharacterized protein LOC101219972 [Cucumis sativus]9.2e-3669.4Show/hide
Query:  MINALRFCRAPPPSVCTTPLPPQLRRGSSPELRFRRIIGFATAPDQNP--ENMDDSKNTAKETGDIMSHSFGEGYATRSDEEGFGGICGGNRS--NDDTD
        MINA+RF R PPP V T+PLPP+LRR SSPEL  R+ I FATAPD+NP  E MDDS+N  KETGDIM  SFGEGYATRS+EEGFGG  GG     +DD  
Subjt:  MINALRFCRAPPPSVCTTPLPPQLRRGSSPELRFRRIIGFATAPDQNP--ENMDDSKNTAKETGDIMSHSFGEGYATRSDEEGFGGICGGNRS--NDDTD

Query:  ANKKSVIHENHPEYDKSQGSEVKEKEKSRHQTHA
         NKK V   N  EYDKSQGSEVKEKEKSRHQ HA
Subjt:  ANKKSVIHENHPEYDKSQGSEVKEKEKSRHQTHA

XP_022133090.1 uncharacterized protein LOC111005770 [Momordica charantia]3.6e-4878.95Show/hide
Query:  MINALRFCRAPPPSVCTTPLPPQLRRGSSPELRFRRIIGFATAP-DQNPENMDDSKNTAKETGDIMSHSFGEGYATRSDEEGFGGICGGNRSNDDTDANK
        M +A+R  R+PPPSV TTPLPPQLRR SSPELR R++IG ATAP DQ+ +NMDDSKNT K+TGDIMSHSFGEGYATRSDEEGFGGI GGNRS+DD    K
Subjt:  MINALRFCRAPPPSVCTTPLPPQLRRGSSPELRFRRIIGFATAP-DQNPENMDDSKNTAKETGDIMSHSFGEGYATRSDEEGFGGICGGNRSNDDTDANK

Query:  KSVIHENHPEYDKSQGSEVKEKEKSRHQTHAKR
          VIHENHPEYDKSQGSEVKEKE SRHQTHA R
Subjt:  KSVIHENHPEYDKSQGSEVKEKEKSRHQTHAKR

XP_023543425.1 uncharacterized protein LOC111803315 [Cucurbita pepo subsp. pepo]2.7e-3564.62Show/hide
Query:  MINALRFCRAPPPSVCTTPLPPQLRRGSSPELRFRRIIGFATAPDQNPENMDDSKNTAKETGDIMSHSFGEGYATRSDEEGFGGICGGNRSNDDTDANKK
        M+NA+RF R+PPP V T PLPPQLRR   PELR R++I F+TAPDQNP+NMDDSKNTAK+T D+M+ SFG  YA+RS+EEGFGGI     S D+   N+K
Subjt:  MINALRFCRAPPPSVCTTPLPPQLRRGSSPELRFRRIIGFATAPDQNPENMDDSKNTAKETGDIMSHSFGEGYATRSDEEGFGGICGGNRSNDDTDANKK

Query:  SVIHENHPEYDKSQGSEVKEKEKSRHQTHA
               PEYDKSQGSEVKEKEK+RHQ H+
Subjt:  SVIHENHPEYDKSQGSEVKEKEKSRHQTHA

XP_038883658.1 uncharacterized protein LOC120074572 [Benincasa hispida]1.2e-3870.77Show/hide
Query:  MINALRFCRAPPPSVCTTPLPPQLRRGSSPELRFRRIIGFATAPDQNPENMDDSKNTAKETGDIMSHSFGEGYATRSDEEGFGGICGGNRSNDDTDANKK
        MINA+RF R PPP V T+PLPPQLRR  SPELR R+ IG ATAPDQN  +MDDS+N AKETGDIM  SFGE YATRS+EEGFGG  G N+ +DD   NKK
Subjt:  MINALRFCRAPPPSVCTTPLPPQLRRGSSPELRFRRIIGFATAPDQNPENMDDSKNTAKETGDIMSHSFGEGYATRSDEEGFGGICGGNRSNDDTDANKK

Query:  SVIHENHPEYDKSQGSEVKEKEKSRHQTHA
           H N  EYDKSQG EVKEKEKSRHQ HA
Subjt:  SVIHENHPEYDKSQGSEVKEKEKSRHQTHA

TrEMBL top hitse value%identityAlignment
A0A0A0KGG3 Uncharacterized protein4.4e-3669.4Show/hide
Query:  MINALRFCRAPPPSVCTTPLPPQLRRGSSPELRFRRIIGFATAPDQNP--ENMDDSKNTAKETGDIMSHSFGEGYATRSDEEGFGGICGGNRS--NDDTD
        MINA+RF R PPP V T+PLPP+LRR SSPEL  R+ I FATAPD+NP  E MDDS+N  KETGDIM  SFGEGYATRS+EEGFGG  GG     +DD  
Subjt:  MINALRFCRAPPPSVCTTPLPPQLRRGSSPELRFRRIIGFATAPDQNP--ENMDDSKNTAKETGDIMSHSFGEGYATRSDEEGFGGICGGNRS--NDDTD

Query:  ANKKSVIHENHPEYDKSQGSEVKEKEKSRHQTHA
         NKK V   N  EYDKSQGSEVKEKEKSRHQ HA
Subjt:  ANKKSVIHENHPEYDKSQGSEVKEKEKSRHQTHA

A0A1S3B3C5 uncharacterized protein LOC1034853509.9e-3669.63Show/hide
Query:  MINALRFCRAPPPSVCTTPLPPQLRRG-SSPELRFRRIIGFATAPDQNP--ENMDDSKNTAKETGDIMSHSFGEGYATRSDEEGFGGICGGNRSNDDTD-
        MINA+RF R PPP V T+PLPPQLRR   S ELR R+  GFATAPDQNP  E MD+S+N  KETGDIM  SFGEGYATRS+EEGFGG  GGN  +DD + 
Subjt:  MINALRFCRAPPPSVCTTPLPPQLRRG-SSPELRFRRIIGFATAPDQNP--ENMDDSKNTAKETGDIMSHSFGEGYATRSDEEGFGGICGGNRSNDDTD-

Query:  -ANKKSVIHENHPEYDKSQGSEVKEKEKSRHQTHA
          NKKSV   N  EYD+SQGSEVKEKEKSRHQ HA
Subjt:  -ANKKSVIHENHPEYDKSQGSEVKEKEKSRHQTHA

A0A5D3CN97 Late embryogenesis abundant protein9.9e-3669.63Show/hide
Query:  MINALRFCRAPPPSVCTTPLPPQLRRG-SSPELRFRRIIGFATAPDQNP--ENMDDSKNTAKETGDIMSHSFGEGYATRSDEEGFGGICGGNRSNDDTD-
        MINA+RF R PPP V T+PLPPQLRR   S ELR R+  GFATAPDQNP  E MD+S+N  KETGDIM  SFGEGYATRS+EEGFGG  GGN  +DD + 
Subjt:  MINALRFCRAPPPSVCTTPLPPQLRRG-SSPELRFRRIIGFATAPDQNP--ENMDDSKNTAKETGDIMSHSFGEGYATRSDEEGFGGICGGNRSNDDTD-

Query:  -ANKKSVIHENHPEYDKSQGSEVKEKEKSRHQTHA
          NKKSV   N  EYD+SQGSEVKEKEKSRHQ HA
Subjt:  -ANKKSVIHENHPEYDKSQGSEVKEKEKSRHQTHA

A0A6J1BUB9 uncharacterized protein LOC1110057701.7e-4878.95Show/hide
Query:  MINALRFCRAPPPSVCTTPLPPQLRRGSSPELRFRRIIGFATAP-DQNPENMDDSKNTAKETGDIMSHSFGEGYATRSDEEGFGGICGGNRSNDDTDANK
        M +A+R  R+PPPSV TTPLPPQLRR SSPELR R++IG ATAP DQ+ +NMDDSKNT K+TGDIMSHSFGEGYATRSDEEGFGGI GGNRS+DD    K
Subjt:  MINALRFCRAPPPSVCTTPLPPQLRRGSSPELRFRRIIGFATAP-DQNPENMDDSKNTAKETGDIMSHSFGEGYATRSDEEGFGGICGGNRSNDDTDANK

Query:  KSVIHENHPEYDKSQGSEVKEKEKSRHQTHAKR
          VIHENHPEYDKSQGSEVKEKE SRHQTHA R
Subjt:  KSVIHENHPEYDKSQGSEVKEKEKSRHQTHAKR

A0A6J1IUE6 uncharacterized protein LOC1114785134.2e-3463.97Show/hide
Query:  MINALRFCRAPPPSVCTTPLPPQLRRGSSPELRFRRIIGFATAPDQNPENMDDSKNTAKETGDIMSHSFGEGYATRSDEEGFGGICGGNRSNDDTDANKK
        MINA+RF R+PPP V T PLPPQLRR  SPELR R++IGF+TAPDQNP NMDDSKNTAK+TGDIM+ SFG+ YA RS+ EGFGGI     S +    N+K
Subjt:  MINALRFCRAPPPSVCTTPLPPQLRRGSSPELRFRRIIGFATAPDQNPENMDDSKNTAKETGDIMSHSFGEGYATRSDEEGFGGICGGNRSNDDTDANKK

Query:  SVIHENHPEYDKSQGSEVKEK------EKSRHQTHA
               PEYDKSQGSEVKE+      EK+RHQTH+
Subjt:  SVIHENHPEYDKSQGSEVKEK------EKSRHQTHA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G66780.1 unknown protein5.6e-2348.89Show/hide
Query:  MINALRFCRAPPP----SVCTTPLPPQLRRGSSPELRFRRIIGFATAPDQNPENMDDS-KNTAKETGDIMSHSFGEGYATRSDEEGFGGICGGNRSNDDT
        MINA +  R+ P     S C+TP     R G       R++ G + A   + + MD   +N  ++TGD+MSHS+GEGYATRSDEEGFGGI GGN++    
Subjt:  MINALRFCRAPPP----SVCTTPLPPQLRRGSSPELRFRRIIGFATAPDQNPENMDDS-KNTAKETGDIMSHSFGEGYATRSDEEGFGGICGGNRSNDDT

Query:  DANKKSVIHENHPEYDKSQGSEVKEKEKSRHQTHA
           K++ IHENHP+YDK+QGSE KEKEK+R+QT +
Subjt:  DANKKSVIHENHPEYDKSQGSEVKEKEKSRHQTHA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAATGCTCTCAGATTCTGCCGTGCTCCGCCGCCAAGTGTTTGCACAACACCTCTGCCGCCGCAGCTCCGCCGTGGAAGCTCGCCTGAGCTCCGATTCCGTCGAAT
TATCGGCTTCGCCACCGCACCTGATCAGAACCCAGAGAATATGGACGACTCTAAGAACACCGCCAAGGAGACTGGAGACATAATGTCCCATTCCTTCGGGGAAGGCTATG
CAACTAGAAGTGATGAAGAAGGATTTGGAGGAATCTGTGGAGGGAATCGATCAAACGACGACACCGACGCTAATAAAAAGTCGGTTATTCACGAGAATCACCCAGAATAT
GATAAAAGCCAAGGGAGCGAAGTGAAGGAGAAGGAGAAGTCTCGCCATCAGACTCATGCAAAACGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGATAAATGCTCTCAGATTCTGCCGTGCTCCGCCGCCAAGTGTTTGCACAACACCTCTGCCGCCGCAGCTCCGCCGTGGAAGCTCGCCTGAGCTCCGATTCCGTCGAAT
TATCGGCTTCGCCACCGCACCTGATCAGAACCCAGAGAATATGGACGACTCTAAGAACACCGCCAAGGAGACTGGAGACATAATGTCCCATTCCTTCGGGGAAGGCTATG
CAACTAGAAGTGATGAAGAAGGATTTGGAGGAATCTGTGGAGGGAATCGATCAAACGACGACACCGACGCTAATAAAAAGTCGGTTATTCACGAGAATCACCCAGAATAT
GATAAAAGCCAAGGGAGCGAAGTGAAGGAGAAGGAGAAGTCTCGCCATCAGACTCATGCAAAACGCTAA
Protein sequenceShow/hide protein sequence
MINALRFCRAPPPSVCTTPLPPQLRRGSSPELRFRRIIGFATAPDQNPENMDDSKNTAKETGDIMSHSFGEGYATRSDEEGFGGICGGNRSNDDTDANKKSVIHENHPEY
DKSQGSEVKEKEKSRHQTHAKR