; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0016277 (gene) of Chayote v1 genome

Gene IDSed0016277
OrganismSechium edule (Chayote v1)
Description60S ribosomal protein L36
Genome locationLG05:3421038..3423408
RNA-Seq ExpressionSed0016277
SyntenySed0016277
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000509 - Ribosomal protein L36e
IPR038097 - Ribosomal protein L36e domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013242.1 60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-4897.27Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGK+SKRV+FVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGAEKKK
        RAGGG EKKK
Subjt:  RAGGGAEKKK

PLY85449.1 hypothetical protein LSAT_3X32241 [Lactuca sativa]9.4e-4984.38Show/hide
Query:  PKFSTSLLLKAQVFECSVMAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGT
        P+ +  +++  +    SVMAPKQPNTGLFVGLNKGH+VTKKELAPRPSDRKGKTSKR  FVR+LIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGT
Subjt:  PKFSTSLLLKAQVFECSVMAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGT

Query:  HKRAKKKREEMSSVLRKMRAGGGAEKKK
        HKRAKKKREEMSSVLRKMR+GGGAEKKK
Subjt:  HKRAKKKREEMSSVLRKMRAGGGAEKKK

TKS09441.1 60S ribosomal protein L36-3 [Populus alba]1.1e-4990.16Show/hide
Query:  LLLKAQVFECSVMAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKK
        +LL+  + E   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRV+FVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKK
Subjt:  LLLKAQVFECSVMAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKK

Query:  KREEMSSVLRKMRAGGGAEKKK
        KREEMS+VLRKMRA GGAEKKK
Subjt:  KREEMSSVLRKMRAGGGAEKKK

XP_004140771.1 60S ribosomal protein L36-2 [Cucumis sativus]4.2e-4998.18Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGK+SKRV+FVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGAEKKK
        RAGGGAEKKK
Subjt:  RAGGGAEKKK

XP_022013305.1 60S ribosomal protein L36-2 [Helianthus annuus]5.5e-4998.18Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MAPKQPNTGLFVGLNKGH+VTKKELAPRPSDRKGKTSKRV FVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGAEKKK
        RAGGGAEKKK
Subjt:  RAGGGAEKKK

TrEMBL top hitse value%identityAlignment
A0A0A0L6L0 60S ribosomal protein L362.1e-4998.18Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGK+SKRV+FVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGAEKKK
        RAGGGAEKKK
Subjt:  RAGGGAEKKK

A0A1S3AYD7 60S ribosomal protein L362.1e-4998.18Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGK+SKRV+FVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGAEKKK
        RAGGGAEKKK
Subjt:  RAGGGAEKKK

A0A251SCZ4 60S ribosomal protein L361.2e-4998.2Show/hide
Query:  VMAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRK
        VMAPKQPNTGLFVGLNKGH+VTKKELAPRPSDRKGKTSKRV FVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRK
Subjt:  VMAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRK

Query:  MRAGGGAEKKK
        MRAGGGAEKKK
Subjt:  MRAGGGAEKKK

A0A4U5QH31 60S ribosomal protein L365.4e-5090.16Show/hide
Query:  LLLKAQVFECSVMAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKK
        +LL+  + E   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRV+FVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKK
Subjt:  LLLKAQVFECSVMAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKK

Query:  KREEMSSVLRKMRAGGGAEKKK
        KREEMS+VLRKMRA GGAEKKK
Subjt:  KREEMSSVLRKMRAGGGAEKKK

A0A5A7UN62 60S ribosomal protein L362.1e-4998.18Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGK+SKRV+FVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGAEKKK
        RAGGGAEKKK
Subjt:  RAGGGAEKKK

SwissProt top hitse value%identityAlignment
O80929 60S ribosomal protein L36-11.7e-4084.76Show/hide
Query:  TGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG--
        TGLFVGLNKGH+VT++ELAPRP+ RKGKTSKR +F+R LIREVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+ GG  
Subjt:  TGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG--

Query:  -AEKK
         AEKK
Subjt:  -AEKK

P52866 60S ribosomal protein L361.2e-3383.52Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKRE
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKR  FVR+LIREVAGF PYEKRITELLKVGKDKRALKV + K+G H +  K+ E
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKRE

Q9LRB8 60S ribosomal protein L364.3e-2870.83Show/hide
Query:  VGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAE
        VGLNKGH VTKK   PRPS RKG  S+RV  VR+++REVAG+APYE+R+ ELLKVGKDKRALK+ KRKLGTH R KKKREEM+ VLRKM+A    E
Subjt:  VGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAE

Q9LZ57 60S ribosomal protein L36-36.4e-4083.65Show/hide
Query:  TGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGG-GA
        TGLFVGLNKGH+VTK+E  PRP++RKGKTSKR +F+R+LI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+GG GA
Subjt:  TGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGG-GA

Query:  EKKK
         +KK
Subjt:  EKKK

Q9M352 60S ribosomal protein L36-28.9e-4281.25Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGKTSKR +F+R+LI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGG--AEKKK
        R+GGG   EKKK
Subjt:  RAGGG--AEKKK

Arabidopsis top hitse value%identityAlignment
AT2G37600.1 Ribosomal protein L36e family protein1.2e-4184.76Show/hide
Query:  TGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG--
        TGLFVGLNKGH+VT++ELAPRP+ RKGKTSKR +F+R LIREVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+ GG  
Subjt:  TGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG--

Query:  -AEKK
         AEKK
Subjt:  -AEKK

AT2G37600.2 Ribosomal protein L36e family protein1.2e-4184.76Show/hide
Query:  TGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG--
        TGLFVGLNKGH+VT++ELAPRP+ RKGKTSKR +F+R LIREVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+ GG  
Subjt:  TGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG--

Query:  -AEKK
         AEKK
Subjt:  -AEKK

AT3G53740.2 Ribosomal protein L36e family protein6.3e-4381.25Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGKTSKR +F+R+LI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGG--AEKKK
        R+GGG   EKKK
Subjt:  RAGGG--AEKKK

AT3G53740.3 Ribosomal protein L36e family protein6.3e-4381.25Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGKTSKR +F+R+LI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGG--AEKKK
        R+GGG   EKKK
Subjt:  RAGGG--AEKKK

AT3G53740.4 Ribosomal protein L36e family protein6.3e-4381.25Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGKTSKR +F+R+LI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGG--AEKKK
        R+GGG   EKKK
Subjt:  RAGGG--AEKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCTCAAAGCCCAAGTTTTCGACCAGTCTGCTACTCAAAGCCCAAGTCTTTGAATGCTCTGTAATGGCTCCAAAACAGCCGAATACAGGCCTTTTTGTTGGCCTTAA
CAAAGGTCACATAGTCACCAAGAAAGAGTTAGCCCCGCGGCCCTCTGATCGCAAGGGAAAAACCAGTAAACGTGTTGTCTTCGTCCGGAGCCTGATTCGAGAGGTTGCTG
GTTTTGCCCCATACGAAAAGAGAATCACCGAGCTTCTCAAAGTTGGAAAAGACAAACGTGCTCTAAAGGTAGCCAAAAGAAAGCTTGGAACTCACAAGAGAGCCAAGAAG
AAGCGAGAAGAGATGTCCAGTGTGCTCAGAAAGATGAGGGCTGGTGGAGGTGCTGAGAAAAAGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATTTTATCCAAATCTGGCCATAGCACAATTACCGGAAGGATGTAAAAACACCTTTAAATCTTGAAGCCCTAATTTTTCATTGCTCGGTCGTCGGTGGTTCTGGCGACGAA
GAACAGGTAAGAAACCCTAACTTCGAGGCTTTCCAATTCGTTGTTCATTCGATATTAATCGTTATGTGAGCACAGTTGCATAGATATTAGTTTCGTTGATCAATTTTCAA
AGTTTCATATTTGTGCGTACGAATTGAATTTTGCGAAGTTCTTAGACTAGCGAATTGTTTTGTTTATGAATCCTTCTTACTATGATATACTTTGCATCGTTGAATTCCAT
GGTGTAAATTTATAATCTGGTTGTAACCATTCAACTGAGGATGCTTGCACATAGCTTGAAGTATTAATCTAATAATTAAACCTTCTAACGTCGTTGAATTCAAAAAAGAA
AAGAAAAGAATGTTTGCACTTTGAATGCTCTGTATGTTCTTTTTTGAAATAAGGGTAACCACGCCCATCCCTAAGTCAGGCATCGGGAGATATCGAAGGAGTAATGTCAT
AACTGAGTCTCGAACCTGAGACCTTGAGAGGAGCATGCCCTCAAAGCCCAAGTTTTCGACCAGTCTGCTACTCAAAGCCCAAGTCTTTGAATGCTCTGTAATGGCTCCAA
AACAGCCGAATACAGGCCTTTTTGTTGGCCTTAACAAAGGTCACATAGTCACCAAGAAAGAGTTAGCCCCGCGGCCCTCTGATCGCAAGGGAAAAACCAGTAAACGTGTT
GTCTTCGTCCGGAGCCTGATTCGAGAGGTTGCTGGTTTTGCCCCATACGAAAAGAGAATCACCGAGCTTCTCAAAGTTGGAAAAGACAAACGTGCTCTAAAGGTAGCCAA
AAGAAAGCTTGGAACTCACAAGAGAGCCAAGAAGAAGCGAGAAGAGATGTCCAGTGTGCTCAGAAAGATGAGGGCTGGTGGAGGTGCTGAGAAAAAGAAGTGAGATCACT
ACTCTTCTGCTCATTCATTATAGTTCTTTTTTTCCCTCTCTGGCTACTCTTTTTGGTTCTTTTCTTGCTGAATTTAATAGAGATCTATGGCAATGCAATTTTAGTTCTTG
TTATCCACTTGTATTACTAACACCCAATTTTGCTATATCCCCTTTTTTCAATGATGCTTTATGGTTTGATGAATTAATATATAGCCATAGCCAGTCATGTTTTGAGTTTA
Protein sequenceShow/hide protein sequence
MPSKPKFSTSLLLKAQVFECSVMAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVVFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKK
KREEMSSVLRKMRAGGGAEKKK