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Sed0016316 (gene) of Chayote v1 genome

Gene IDSed0016316
OrganismSechium edule (Chayote v1)
DescriptionDBD_Tnp_Mut domain-containing protein
Genome locationLG06:10572089..10572814
RNA-Seq ExpressionSed0016316
SyntenySed0016316
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031318.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]8.0e-4647.06Show/hide
Query:  SYEKYKISGVLVDEVMSFEAFGLLILRELKLDVHRSSSELSVLLDYGQST--PPFEILEDKDVDWFLTLVKNNGTRHPLV------VDVKDFYFEGTSSS
        SY  YK +GVLVDE+MSFE F  LILRE+  D   SS +LS+LLDYG +      +I EDKDV WFL+LVK   TRHPLV      V   D  +     S
Subjt:  SYEKYKISGVLVDEVMSFEAFGLLILRELKLDVHRSSSELSVLLDYGQST--PPFEILEDKDVDWFLTLVKNNGTRHPLV------VDVKDFYFEGTSSS

Query:  VVSNSTLLVSSSTVDDNDGDGVLFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSHQAVEFQYCKIDYLWNVKASRFKDSD
         + N   L+ SS++DD+      F ++ DI    L   F++  KD FASKE+L   F Y+A+KNNFEF+T RS+ +++EF+  + +  W V+ASR+K  +
Subjt:  VVSNSTLLVSSSTVDDNDGDGVLFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSHQAVEFQYCKIDYLWNVKASRFKDSD

Query:  LWILRKYISIHNCPLNSIQTSHRQASSILIGDSLEEEF
        LW LRKYI+ HNC +N IQT+H+QAS+ LI D + ++F
Subjt:  LWILRKYISIHNCPLNSIQTSHRQASSILIGDSLEEEF

KAA0063194.1 uncharacterized protein E6C27_scaffold381G00870 [Cucumis melo var. makuwa]3.6e-4647.06Show/hide
Query:  SYEKYKISGVLVDEVMSFEAFGLLILRELKLDVHRSSSELSVLLDYG--QSTPPFEILEDKDVDWFLTLVKNNGTRHPLV------VDVKDFYFEGTSSS
        SY  YK +GVLV+E+MSFE F  LILRE++ D   SS +LS+LLDYG        +I EDKDV WFL+LVK   TRHPLV      V   D  +     S
Subjt:  SYEKYKISGVLVDEVMSFEAFGLLILRELKLDVHRSSSELSVLLDYG--QSTPPFEILEDKDVDWFLTLVKNNGTRHPLV------VDVKDFYFEGTSSS

Query:  VVSNSTLLVSSSTVDDNDGDGVLFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSHQAVEFQYCKIDYLWNVKASRFKDSD
         + N   L+ SS++DD+      F ++ D+    L   FN+  KD FASKE+L   F Y+A+KNNFEF+T RS+ +++EF+  + +  W V+ASR+K  +
Subjt:  VVSNSTLLVSSSTVDDNDGDGVLFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSHQAVEFQYCKIDYLWNVKASRFKDSD

Query:  LWILRKYISIHNCPLNSIQTSHRQASSILIGDSLEEEF
        LW LRKYI+ HNC +N IQT+H+QASS LI D + ++F
Subjt:  LWILRKYISIHNCPLNSIQTSHRQASSILIGDSLEEEF

TYK09469.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]8.0e-4647.06Show/hide
Query:  SYEKYKISGVLVDEVMSFEAFGLLILRELKLDVHRSSSELSVLLDYGQST--PPFEILEDKDVDWFLTLVKNNGTRHPLV------VDVKDFYFEGTSSS
        SY  YK +GVLVDE+MSFE F  LILRE+  D   SS +LS+LLDYG +      +I EDKDV WFL+LVK   TRHPLV      V   D  +     S
Subjt:  SYEKYKISGVLVDEVMSFEAFGLLILRELKLDVHRSSSELSVLLDYGQST--PPFEILEDKDVDWFLTLVKNNGTRHPLV------VDVKDFYFEGTSSS

Query:  VVSNSTLLVSSSTVDDNDGDGVLFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSHQAVEFQYCKIDYLWNVKASRFKDSD
         + N   L+ SS++DD+      F ++ DI    L   F++  KD FASKE+L   F Y+A+KNNFEF+T RS+ +++EF+  + +  W V+ASR+K  +
Subjt:  VVSNSTLLVSSSTVDDNDGDGVLFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSHQAVEFQYCKIDYLWNVKASRFKDSD

Query:  LWILRKYISIHNCPLNSIQTSHRQASSILIGDSLEEEF
        LW LRKYI+ HNC +N IQT+H+QAS+ LI D + ++F
Subjt:  LWILRKYISIHNCPLNSIQTSHRQASSILIGDSLEEEF

TYK23827.1 MuDR family transposase [Cucumis melo var. makuwa]2.9e-4848.32Show/hide
Query:  SYEKYKISGVLVDEVMSFEAFGLLILRELKLDVHRSSSELSVLLDYG--QSTPPFEILEDKDVDWFLTLVKNNGTRHPLV------VDVKDFYFEGTSSS
        SY  YK +GVLVDE+MSFE FG LILRE++ D   SS +LS+LLDYG        +I EDKDV WFL+LVK   TRHPLV      V   D  +     S
Subjt:  SYEKYKISGVLVDEVMSFEAFGLLILRELKLDVHRSSSELSVLLDYG--QSTPPFEILEDKDVDWFLTLVKNNGTRHPLV------VDVKDFYFEGTSSS

Query:  VVSNSTLLVSSSTVDDNDGDGVLFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSHQAVEFQYCKIDYLWNVKASRFKDSD
         + N   L+SSS++DD+      F ++ DI    L   F++  KD FASKE+L   F Y+A+KNNFEF+T RS+ +++EF+  + +  W V+ASR+K  +
Subjt:  VVSNSTLLVSSSTVDDNDGDGVLFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSHQAVEFQYCKIDYLWNVKASRFKDSD

Query:  LWILRKYISIHNCPLNSIQTSHRQASSILIGDSLEEEF
        LW LRKYI+ HNC +N IQT+H+QASS LI D + ++F
Subjt:  LWILRKYISIHNCPLNSIQTSHRQASSILIGDSLEEEF

XP_038907134.1 uncharacterized protein LOC120092945 [Benincasa hispida]1.2e-5250.84Show/hide
Query:  YEKYKISGVLVDEVMSFEAFGLLILRELKLDVHRSSSELSVLLDYGQSTPP--FEILEDKDVDWFLTLVKNNGTRHPLVVDVKDFYFEGTSSSVVSN---
        Y  YK +GVLVD++M FE F  LI++E++LD   SS ELS LLD+G +      EI EDKDV WFLTLVK   TRHPLV  V     EG+SS V S    
Subjt:  YEKYKISGVLVDEVMSFEAFGLLILRELKLDVHRSSSELSVLLDYGQSTPP--FEILEDKDVDWFLTLVKNNGTRHPLVVDVKDFYFEGTSSSVVSN---

Query:  --STLLVSSSTVDDNDGDGVLFHVIKDIRLDCVFNVKDTFASKEVLCSCFKYLAVKNNFEFRTPRSSHQAVEFQYCKIDYLWNVKASRFKDSDLWILRKY
          S +  S   +DD+      F VI DI +      KD FASKE+L  CF Y+AVK NFEF+T RS+ +++EF+  +    W V+ASR+K SDLW+LRK+
Subjt:  --STLLVSSSTVDDNDGDGVLFHVIKDIRLDCVFNVKDTFASKEVLCSCFKYLAVKNNFEFRTPRSSHQAVEFQYCKIDYLWNVKASRFKDSDLWILRKY

Query:  ISIHNCPLNSIQTSHRQASSILIGDSLEEEFRFGSFKS
        I IH+C +N++QTSHRQAS+ LIGD L+ EFR  S  S
Subjt:  ISIHNCPLNSIQTSHRQASSILIGDSLEEEFRFGSFKS

TrEMBL top hitse value%identityAlignment
A0A5A7T3G5 Protein FAR1-RELATED SEQUENCE 4-like3.9e-4647.06Show/hide
Query:  SYEKYKISGVLVDEVMSFEAFGLLILRELKLDVHRSSSELSVLLDYGQST--PPFEILEDKDVDWFLTLVKNNGTRHPLV------VDVKDFYFEGTSSS
        SY  YK +GVLVDE+MSFE F  LILRE+  D   SS +LS+LLDYG +      +I EDKDV WFL+LVK   TRHPLV      V   D  +     S
Subjt:  SYEKYKISGVLVDEVMSFEAFGLLILRELKLDVHRSSSELSVLLDYGQST--PPFEILEDKDVDWFLTLVKNNGTRHPLV------VDVKDFYFEGTSSS

Query:  VVSNSTLLVSSSTVDDNDGDGVLFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSHQAVEFQYCKIDYLWNVKASRFKDSD
         + N   L+ SS++DD+      F ++ DI    L   F++  KD FASKE+L   F Y+A+KNNFEF+T RS+ +++EF+  + +  W V+ASR+K  +
Subjt:  VVSNSTLLVSSSTVDDNDGDGVLFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSHQAVEFQYCKIDYLWNVKASRFKDSD

Query:  LWILRKYISIHNCPLNSIQTSHRQASSILIGDSLEEEF
        LW LRKYI+ HNC +N IQT+H+QAS+ LI D + ++F
Subjt:  LWILRKYISIHNCPLNSIQTSHRQASSILIGDSLEEEF

A0A5A7V7K0 Uncharacterized protein1.7e-4647.06Show/hide
Query:  SYEKYKISGVLVDEVMSFEAFGLLILRELKLDVHRSSSELSVLLDYG--QSTPPFEILEDKDVDWFLTLVKNNGTRHPLV------VDVKDFYFEGTSSS
        SY  YK +GVLV+E+MSFE F  LILRE++ D   SS +LS+LLDYG        +I EDKDV WFL+LVK   TRHPLV      V   D  +     S
Subjt:  SYEKYKISGVLVDEVMSFEAFGLLILRELKLDVHRSSSELSVLLDYG--QSTPPFEILEDKDVDWFLTLVKNNGTRHPLV------VDVKDFYFEGTSSS

Query:  VVSNSTLLVSSSTVDDNDGDGVLFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSHQAVEFQYCKIDYLWNVKASRFKDSD
         + N   L+ SS++DD+      F ++ D+    L   FN+  KD FASKE+L   F Y+A+KNNFEF+T RS+ +++EF+  + +  W V+ASR+K  +
Subjt:  VVSNSTLLVSSSTVDDNDGDGVLFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSHQAVEFQYCKIDYLWNVKASRFKDSD

Query:  LWILRKYISIHNCPLNSIQTSHRQASSILIGDSLEEEF
        LW LRKYI+ HNC +N IQT+H+QASS LI D + ++F
Subjt:  LWILRKYISIHNCPLNSIQTSHRQASSILIGDSLEEEF

A0A5D3C8T8 SWIM-type domain-containing protein3.9e-4647.06Show/hide
Query:  SYEKYKISGVLVDEVMSFEAFGLLILRELKLDVHRSSSELSVLLDYGQST--PPFEILEDKDVDWFLTLVKNNGTRHPLV------VDVKDFYFEGTSSS
        SY  YK +GVLVDE+MSFE F  LILRE+  D   SS +LS+LLDYG +      +I EDKDV WFL+LVK   TRHPLV      V   D  +     S
Subjt:  SYEKYKISGVLVDEVMSFEAFGLLILRELKLDVHRSSSELSVLLDYGQST--PPFEILEDKDVDWFLTLVKNNGTRHPLV------VDVKDFYFEGTSSS

Query:  VVSNSTLLVSSSTVDDNDGDGVLFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSHQAVEFQYCKIDYLWNVKASRFKDSD
         + N   L+ SS++DD+      F ++ DI    L   F++  KD FASKE+L   F Y+A+KNNFEF+T RS+ +++EF+  + +  W V+ASR+K  +
Subjt:  VVSNSTLLVSSSTVDDNDGDGVLFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSHQAVEFQYCKIDYLWNVKASRFKDSD

Query:  LWILRKYISIHNCPLNSIQTSHRQASSILIGDSLEEEF
        LW LRKYI+ HNC +N IQT+H+QAS+ LI D + ++F
Subjt:  LWILRKYISIHNCPLNSIQTSHRQASSILIGDSLEEEF

A0A5D3DAW8 Protein FAR1-RELATED SEQUENCE 4-like3.9e-4647.06Show/hide
Query:  SYEKYKISGVLVDEVMSFEAFGLLILRELKLDVHRSSSELSVLLDYGQST--PPFEILEDKDVDWFLTLVKNNGTRHPLV------VDVKDFYFEGTSSS
        SY  YK +GVLVDE+MSFE F  LILRE+  D   SS +LS+LLDYG +      +I EDKDV WFL+LVK   TRHPLV      V   D  +     S
Subjt:  SYEKYKISGVLVDEVMSFEAFGLLILRELKLDVHRSSSELSVLLDYGQST--PPFEILEDKDVDWFLTLVKNNGTRHPLV------VDVKDFYFEGTSSS

Query:  VVSNSTLLVSSSTVDDNDGDGVLFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSHQAVEFQYCKIDYLWNVKASRFKDSD
         + N   L+ SS++DD+      F ++ DI    L   F++  KD FASKE+L   F Y+A+KNNFEF+T RS+ +++EF+  + +  W V+ASR+K  +
Subjt:  VVSNSTLLVSSSTVDDNDGDGVLFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSHQAVEFQYCKIDYLWNVKASRFKDSD

Query:  LWILRKYISIHNCPLNSIQTSHRQASSILIGDSLEEEF
        LW LRKYI+ HNC +N IQT+H+QAS+ LI D + ++F
Subjt:  LWILRKYISIHNCPLNSIQTSHRQASSILIGDSLEEEF

A0A5D3DJR8 MuDR family transposase1.4e-4848.32Show/hide
Query:  SYEKYKISGVLVDEVMSFEAFGLLILRELKLDVHRSSSELSVLLDYG--QSTPPFEILEDKDVDWFLTLVKNNGTRHPLV------VDVKDFYFEGTSSS
        SY  YK +GVLVDE+MSFE FG LILRE++ D   SS +LS+LLDYG        +I EDKDV WFL+LVK   TRHPLV      V   D  +     S
Subjt:  SYEKYKISGVLVDEVMSFEAFGLLILRELKLDVHRSSSELSVLLDYG--QSTPPFEILEDKDVDWFLTLVKNNGTRHPLV------VDVKDFYFEGTSSS

Query:  VVSNSTLLVSSSTVDDNDGDGVLFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSHQAVEFQYCKIDYLWNVKASRFKDSD
         + N   L+SSS++DD+      F ++ DI    L   F++  KD FASKE+L   F Y+A+KNNFEF+T RS+ +++EF+  + +  W V+ASR+K  +
Subjt:  VVSNSTLLVSSSTVDDNDGDGVLFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSHQAVEFQYCKIDYLWNVKASRFKDSD

Query:  LWILRKYISIHNCPLNSIQTSHRQASSILIGDSLEEEF
        LW LRKYI+ HNC +N IQT+H+QASS LI D + ++F
Subjt:  LWILRKYISIHNCPLNSIQTSHRQASSILIGDSLEEEF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGGCAATGGAATGTTAATGGTTTCTTATGAGAAGTATAAGATTAGTGGAGTTTTGGTGGATGAAGTAATGAGTTTTGAAGCTTTTGGTTTGCTGATTTTAAGAGA
ATTAAAATTGGATGTACATCGATCTTCTTCAGAATTATCTGTTTTATTGGATTATGGCCAAAGTACCCCACCTTTTGAAATTTTGGAAGATAAAGACGTAGACTGGTTCT
TAACATTAGTTAAGAATAATGGTACGAGACATCCATTAGTGGTTGATGTTAAGGACTTTTATTTCGAGGGGACATCTAGTAGTGTTGTTAGCAATTCAACTTTGTTGGTG
TCTTCCTCAACTGTAGATGATAACGATGGTGATGGTGTCCTTTTTCATGTCATTAAAGATATTCGGTTGGATTGTGTCTTTAATGTAAAAGATACATTTGCAAGCAAAGA
AGTGTTGTGTAGTTGTTTTAAATACTTGGCTGTGAAAAATAATTTCGAGTTTAGGACTCCTAGATCCAGCCATCAAGCAGTTGAGTTTCAATATTGCAAAATTGATTATT
TATGGAATGTTAAGGCATCTCGTTTCAAGGATAGTGACCTATGGATCCTTAGGAAGTACATTTCTATTCATAATTGTCCTTTGAATAGTATTCAAACATCTCATAGGCAA
GCATCATCTATTTTAATCGGGGATTCTTTAGAAGAAGAATTTAGGTTTGGTTCCTTTAAAAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGGCAATGGAATGTTAATGGTTTCTTATGAGAAGTATAAGATTAGTGGAGTTTTGGTGGATGAAGTAATGAGTTTTGAAGCTTTTGGTTTGCTGATTTTAAGAGA
ATTAAAATTGGATGTACATCGATCTTCTTCAGAATTATCTGTTTTATTGGATTATGGCCAAAGTACCCCACCTTTTGAAATTTTGGAAGATAAAGACGTAGACTGGTTCT
TAACATTAGTTAAGAATAATGGTACGAGACATCCATTAGTGGTTGATGTTAAGGACTTTTATTTCGAGGGGACATCTAGTAGTGTTGTTAGCAATTCAACTTTGTTGGTG
TCTTCCTCAACTGTAGATGATAACGATGGTGATGGTGTCCTTTTTCATGTCATTAAAGATATTCGGTTGGATTGTGTCTTTAATGTAAAAGATACATTTGCAAGCAAAGA
AGTGTTGTGTAGTTGTTTTAAATACTTGGCTGTGAAAAATAATTTCGAGTTTAGGACTCCTAGATCCAGCCATCAAGCAGTTGAGTTTCAATATTGCAAAATTGATTATT
TATGGAATGTTAAGGCATCTCGTTTCAAGGATAGTGACCTATGGATCCTTAGGAAGTACATTTCTATTCATAATTGTCCTTTGAATAGTATTCAAACATCTCATAGGCAA
GCATCATCTATTTTAATCGGGGATTCTTTAGAAGAAGAATTTAGGTTTGGTTCCTTTAAAAGTTGA
Protein sequenceShow/hide protein sequence
MVGNGMLMVSYEKYKISGVLVDEVMSFEAFGLLILRELKLDVHRSSSELSVLLDYGQSTPPFEILEDKDVDWFLTLVKNNGTRHPLVVDVKDFYFEGTSSSVVSNSTLLV
SSSTVDDNDGDGVLFHVIKDIRLDCVFNVKDTFASKEVLCSCFKYLAVKNNFEFRTPRSSHQAVEFQYCKIDYLWNVKASRFKDSDLWILRKYISIHNCPLNSIQTSHRQ
ASSILIGDSLEEEFRFGSFKS