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Sed0016324 (gene) of Chayote v1 genome

Gene IDSed0016324
OrganismSechium edule (Chayote v1)
DescriptionAcidic leucine-rich nuclear phosphoprotein 32-related protein 2
Genome locationLG12:2707409..2709494
RNA-Seq ExpressionSed0016324
SyntenySed0016324
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049218.1 uncharacterized protein E6C27_scaffold171G004580 [Cucumis melo var. makuwa]7.1e-3891.21Show/hide
Query:  MEGDSKDVNGCKEKVVDSVAAGEVGDSGNGEEYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCS
        M+GDSKDVNGCKEK +DS AAGEVGD  NGEEYSESNALLPPRRGGMSRK NKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE DSCS
Subjt:  MEGDSKDVNGCKEKVVDSVAAGEVGDSGNGEEYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCS
KAG6597344.1 hypothetical protein SDJN03_10524, partial [Cucurbita argyrosperma subsp. sororia]1.0e-3689.47Show/hide
Query:  MEGDSKDVNGCKEKVVDSVAAGEVGDSGNGEEYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
        M GDSKDV    E+ VDSVAAGEVGDSGNGE+YSESNALLPPRRGGMSRKSNKPRMKVRW DSNGNNLAEILEFQPSDVSDSGDEE DSCSCIIM
Subjt:  MEGDSKDVNGCKEKVVDSVAAGEVGDSGNGEEYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
XP_004134046.1 uncharacterized protein LOC101205158 [Cucumis sativus]7.5e-4092.47Show/hide
Query:  GDSKDVNGCKEKVVDSVAAGEVGDSGNGEEYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
        GDSKDVNGCKEK +DS AAGEVGD  NGEEYSESNALLPPRRGGMSRK NKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE DSCSCIIM
Subjt:  GDSKDVNGCKEKVVDSVAAGEVGDSGNGEEYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
XP_008438475.1 PREDICTED: uncharacterized protein LOC103483558 isoform X2 [Cucumis melo]7.1e-3891.21Show/hide
Query:  MEGDSKDVNGCKEKVVDSVAAGEVGDSGNGEEYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCS
        M+GDSKDVNGCKEK +DS AAGEVGD  NGEEYSESNALLPPRRGGMSRK NKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE DSCS
Subjt:  MEGDSKDVNGCKEKVVDSVAAGEVGDSGNGEEYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCS
XP_038897861.1 uncharacterized protein LOC120085750 [Benincasa hispida]5.2e-4191.58Show/hide
Query:  MEGDSKDVNGCKEKVVDSVAAGEVGDSGNGEEYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
        M+GDSKDVNGCKEK++DS A GEVGD  NGEEYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE DSCSCIIM
Subjt:  MEGDSKDVNGCKEKVVDSVAAGEVGDSGNGEEYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
TrEMBL top hitse value%identityAlignment
A0A0A0L701 Uncharacterized protein3.6e-4092.47Show/hide
Query:  GDSKDVNGCKEKVVDSVAAGEVGDSGNGEEYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
        GDSKDVNGCKEK +DS AAGEVGD  NGEEYSESNALLPPRRGGMSRK NKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE DSCSCIIM
Subjt:  GDSKDVNGCKEKVVDSVAAGEVGDSGNGEEYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
A0A1S3AX40 uncharacterized protein LOC103483558 isoform X23.4e-3891.21Show/hide
Query:  MEGDSKDVNGCKEKVVDSVAAGEVGDSGNGEEYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCS
        M+GDSKDVNGCKEK +DS AAGEVGD  NGEEYSESNALLPPRRGGMSRK NKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE DSCS
Subjt:  MEGDSKDVNGCKEKVVDSVAAGEVGDSGNGEEYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCS
A0A5A7U1V8 Uncharacterized protein3.4e-3891.21Show/hide
Query:  MEGDSKDVNGCKEKVVDSVAAGEVGDSGNGEEYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCS
        M+GDSKDVNGCKEK +DS AAGEVGD  NGEEYSESNALLPPRRGGMSRK NKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE DSCS
Subjt:  MEGDSKDVNGCKEKVVDSVAAGEVGDSGNGEEYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCS
A0A6J1EBY1 uncharacterized protein LOC1114317931.2e-3585.26Show/hide
Query:  MEGDSKDVNGCKEKVVDSVAAGEVGDSGNGEEYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
        M GDS+ VNG  E+ VDS AAGEVGD  NGE+ SESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE DSCSC+IM
Subjt:  MEGDSKDVNGCKEKVVDSVAAGEVGDSGNGEEYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
A0A6J1INK9 uncharacterized protein LOC1114791206.0e-3584.21Show/hide
Query:  MEGDSKDVNGCKEKVVDSVAAGEVGDSGNGEEYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
        M GDS+ VNG  E+ VDS AAGEVGD  N E+ SESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE DSCSC+IM
Subjt:  MEGDSKDVNGCKEKVVDSVAAGEVGDSGNGEEYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G34010.1 unknown protein8.4e-0548.89Show/hide
Query:  RMKVRWNDSNGNNLAEILEFQPSDVSDSGDE----EGDSCSCIIM
        R KV+W D+ G  +AE+ EF+PS+V +S DE     G SC C IM
Subjt:  RMKVRWNDSNGNNLAEILEFQPSDVSDSGDE----EGDSCSCIIM
AT1G55475.1 unknown protein6.4e-0546.51Show/hide
Query:  KPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
        + + KV+W D  G  LAEI EF+PSD  D   + G +C CII+
Subjt:  KPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
AT2G33390.1 unknown protein3.7e-2150.54Show/hide
Query:  GDSKDVNGCKEKVVDSVAAGEVGDSGNGEEYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
        G+ K+ NGC+ K + S+ + E+ D    EE SES  LLPPR+GGMSR ++K +  V+WND  G+NLAE+L ++PS+VSD+ D++ DSC C IM
Subjt:  GDSKDVNGCKEKVVDSVAAGEVGDSGNGEEYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGCGATTCTAAGGATGTTAATGGCTGCAAAGAGAAGGTTGTTGATTCTGTGGCTGCCGGAGAAGTTGGGGATTCTGGTAACGGTGAGGAGTACAGTGAATCGAA
TGCGTTATTGCCGCCGCGGCGCGGCGGAATGTCAAGGAAATCGAATAAGCCGAGGATGAAAGTTCGGTGGAATGATAGTAATGGTAATAACCTAGCGGAAATTTTGGAGT
TTCAACCGAGCGATGTGAGCGACTCCGGCGACGAGGAGGGTGATTCTTGCAGCTGTATAATTATGTAG
mRNA sequenceShow/hide mRNA sequence
ATTCACGATTCTGAGATAAAATTTCGTTTCGTTATATTAATTTGGTGAACCCCTTTTTTCAAATTTCTCCTTCTTGGGGGTTTTTGAGGGGATTTAATTTAATTTCTCTG
TCACTTTCTTATGAATCTTTCTATTCGAAATCCCCTTTCTTTGTAGCGTTATTTGGTGAATGGTTTAGATCGAGGGTTTTTACTTTTTGAAGAGGGTTTTTTGATGGGGT
TGTTGGGTTCTTAAATTTTGAACCCATTAGCGTTGACCCAGTTGTGAAATTTGAGTTTTTAGTGGATTTTATGAGATGATTCGGTTCGGAAATCTGAAATCTGGGTTCGA
TTTTTGGTGTAGTTGATAGGGAAATTTTCCATTTGATTTATAGTTAGTGAGAGTTTTGAACTATGGAGGGCGATTCTAAGGATGTTAATGGCTGCAAAGAGAAGGTTGTT
GATTCTGTGGCTGCCGGAGAAGTTGGGGATTCTGGTAACGGTGAGGAGTACAGTGAATCGAATGCGTTATTGCCGCCGCGGCGCGGCGGAATGTCAAGGAAATCGAATAA
GCCGAGGATGAAAGTTCGGTGGAATGATAGTAATGGTAATAACCTAGCGGAAATTTTGGAGTTTCAACCGAGCGATGTGAGCGACTCCGGCGACGAGGAGGGTGATTCTT
GCAGCTGTATAATTATGTAGATTAATACATCAAATACTAGTGTATAATGACAAGAACAATGTGGTTGCTTTACTGCTATAACCGATAGTCATTGGTGGTGTTTCTGACTT
TTTACCGATTGCTTTGCTACTACGACGGGTTCAAAAATTGACCGATTGATATGTTGTTATCCCTTGCGGTGTTTAGCGAGATGTATCCCAGTTACATCTTGTGCTGTTTC
GGTTTTTCGAATTTGTAAGATCACCATCCAGGTGATGTATACTATATGGTGATGCAGATTAATGATGTTATTATAACAAACATTCAGATTAGTTGAGCATTTGACAGTGC
AGAATCATTGTGTAGTGTAAAAACACTTGGAAATAGAAAATTTTAATATACTTTTCATGGTTAATGAATAAAAGAGAGCTTCTGCA
Protein sequenceShow/hide protein sequence
MEGDSKDVNGCKEKVVDSVAAGEVGDSGNGEEYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM