CuGenDBv2

Gene ID	Sed0016332
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Genome location	LG04:28420823..28425041
RNA-Seq Expression	Sed0016332
Synteny	Sed0016332
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004137845.1 uncharacterized protein LOC101222625 [Cucumis sativus]

7.2e-54

85.94

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Query:  MSKKGVAGGGAALSKDAPWRASGHKLTPKIHHAPVLRIPQSPFSNYALSVMKHPDPVGSGLAMDAILESAGPDCIVPGQSAPLKLLGLKIWPIEVDLKFV
        MSKKG+  GGA LSKDAPWRASG K  PKI+HAP+LRI QSPFSNYALSVMKHPDP+GSGLA DAILE+AGPDCIVPGQSAP+KLLGLK+WPI+VDLKF+
Subjt:  MSKKGVAGGGAALSKDAPWRASGHKLTPKIHHAPVLRIPQSPFSNYALSVMKHPDPVGSGLAMDAILESAGPDCIVPGQSAPLKLLGLKIWPIEVDLKFV

Query:  EPVGRELKLLGKFMDDAVSLMNKSFIDR
        EPVGRELKLLGKFMDDAV LMNKSFIDR
Subjt:  EPVGRELKLLGKFMDDAVSLMNKSFIDR

XP_008442724.1 PREDICTED: uncharacterized protein LOC103486514 [Cucumis melo]

1.5e-54

85.94

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Query:  MSKKGVAGGGAALSKDAPWRASGHKLTPKIHHAPVLRIPQSPFSNYALSVMKHPDPVGSGLAMDAILESAGPDCIVPGQSAPLKLLGLKIWPIEVDLKFV
        MSKKG+ GGGAALSKDAPWRASG K  PKIHHAP+LRI QSPFS+YAL+VMKHPDP+GSGLA DA+LE+AGPDCIVPGQSAP+KLLGLK+WPI+VDLK +
Subjt:  MSKKGVAGGGAALSKDAPWRASGHKLTPKIHHAPVLRIPQSPFSNYALSVMKHPDPVGSGLAMDAILESAGPDCIVPGQSAPLKLLGLKIWPIEVDLKFV

Query:  EPVGRELKLLGKFMDDAVSLMNKSFIDR
        EPVGRELKLLGKFMDDAVSLMNKSFIDR
Subjt:  EPVGRELKLLGKFMDDAVSLMNKSFIDR

XP_022144765.1 uncharacterized protein LOC111014375 [Momordica charantia]

3.8e-55

86.72

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Query:  MSKKGVAGGGAALSKDAPWRASGHKLTPKIHHAPVLRIPQSPFSNYALSVMKHPDPVGSGLAMDAILESAGPDCIVPGQSAPLKLLGLKIWPIEVDLKFV
        MS+K V GGGAALSKDAPWRASG  + PKIHHAPVLRI QSPFSNYALSVMKHPDP+GSGLA DAILE+AGPDCIVPGQSAP+KLLGLK+WPI++DLKF 
Subjt:  MSKKGVAGGGAALSKDAPWRASGHKLTPKIHHAPVLRIPQSPFSNYALSVMKHPDPVGSGLAMDAILESAGPDCIVPGQSAPLKLLGLKIWPIEVDLKFV

Query:  EPVGRELKLLGKFMDDAVSLMNKSFIDR
        EPVGRELKLLGKFMDDAV+LMNKSFIDR
Subjt:  EPVGRELKLLGKFMDDAVSLMNKSFIDR

XP_022937008.1 uncharacterized protein LOC111443428 [Cucurbita moschata]

7.2e-54

85.16

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Query:  MSKKGVAGGGAALSKDAPWRASGHKLTPKIHHAPVLRIPQSPFSNYALSVMKHPDPVGSGLAMDAILESAGPDCIVPGQSAPLKLLGLKIWPIEVDLKFV
        MSKKG AG    L KDAPWRA+G K TPKIHHAPVLRI QSPFSNYA+SVMKHPDP+GSGLAMDAILESAGPDCIVPGQ+AP+KLLGLK+WPI+VDLKF+
Subjt:  MSKKGVAGGGAALSKDAPWRASGHKLTPKIHHAPVLRIPQSPFSNYALSVMKHPDPVGSGLAMDAILESAGPDCIVPGQSAPLKLLGLKIWPIEVDLKFV

Query:  EPVGRELKLLGKFMDDAVSLMNKSFIDR
        EPVGR+LKLLGKFMDDAV+LMNKSFIDR
Subjt:  EPVGRELKLLGKFMDDAVSLMNKSFIDR

XP_038903012.1 uncharacterized protein LOC120089717 [Benincasa hispida]

3.3e-54

85.94

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Query:  MSKKGVAGGGAALSKDAPWRASGHKLTPKIHHAPVLRIPQSPFSNYALSVMKHPDPVGSGLAMDAILESAGPDCIVPGQSAPLKLLGLKIWPIEVDLKFV
        MSKKG+ GGGAALSKDAPWRAS  K  PKIHHAP+LRI QSPFSNYALSVMKHPDP+GSGLA DAILE+AGPDCIVPGQSAP+KLLGLK+WPI++DLK +
Subjt:  MSKKGVAGGGAALSKDAPWRASGHKLTPKIHHAPVLRIPQSPFSNYALSVMKHPDPVGSGLAMDAILESAGPDCIVPGQSAPLKLLGLKIWPIEVDLKFV

Query:  EPVGRELKLLGKFMDDAVSLMNKSFIDR
        EPVGRELKLLGKFMDDAV+LMNKSFIDR
Subjt:  EPVGRELKLLGKFMDDAVSLMNKSFIDR

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B749 uncharacterized protein LOC103486514

7.1e-55

85.94

Show/hide

Query:  MSKKGVAGGGAALSKDAPWRASGHKLTPKIHHAPVLRIPQSPFSNYALSVMKHPDPVGSGLAMDAILESAGPDCIVPGQSAPLKLLGLKIWPIEVDLKFV
        MSKKG+ GGGAALSKDAPWRASG K  PKIHHAP+LRI QSPFS+YAL+VMKHPDP+GSGLA DA+LE+AGPDCIVPGQSAP+KLLGLK+WPI+VDLK +
Subjt:  MSKKGVAGGGAALSKDAPWRASGHKLTPKIHHAPVLRIPQSPFSNYALSVMKHPDPVGSGLAMDAILESAGPDCIVPGQSAPLKLLGLKIWPIEVDLKFV

Query:  EPVGRELKLLGKFMDDAVSLMNKSFIDR
        EPVGRELKLLGKFMDDAVSLMNKSFIDR
Subjt:  EPVGRELKLLGKFMDDAVSLMNKSFIDR

A0A5A7TQX6 Uncharacterized protein

1.2e-51

83.59

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Query:  MSKKGVAGGGAALSKDAPWRASGHKLTPKIHHAPVLRIPQSPFSNYALSVMKHPDPVGSGLAMDAILESAGPDCIVPGQSAPLKLLGLKIWPIEVDLKFV
        MSKKG+ GGGAALSKDAPWRASG K  PKIHHAP+LRI QSPFS+YAL+   HPDP+GSGLA DA+LE+AGPDCIVPGQSAP+KLLGLK+WPI+VDLK +
Subjt:  MSKKGVAGGGAALSKDAPWRASGHKLTPKIHHAPVLRIPQSPFSNYALSVMKHPDPVGSGLAMDAILESAGPDCIVPGQSAPLKLLGLKIWPIEVDLKFV

Query:  EPVGRELKLLGKFMDDAVSLMNKSFIDR
        EPVGRELKLLGKFMDDAVSLMNKSFIDR
Subjt:  EPVGRELKLLGKFMDDAVSLMNKSFIDR

A0A6J1CSK2 uncharacterized protein LOC111014375

1.9e-55

86.72

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Query:  MSKKGVAGGGAALSKDAPWRASGHKLTPKIHHAPVLRIPQSPFSNYALSVMKHPDPVGSGLAMDAILESAGPDCIVPGQSAPLKLLGLKIWPIEVDLKFV
        MS+K V GGGAALSKDAPWRASG  + PKIHHAPVLRI QSPFSNYALSVMKHPDP+GSGLA DAILE+AGPDCIVPGQSAP+KLLGLK+WPI++DLKF 
Subjt:  MSKKGVAGGGAALSKDAPWRASGHKLTPKIHHAPVLRIPQSPFSNYALSVMKHPDPVGSGLAMDAILESAGPDCIVPGQSAPLKLLGLKIWPIEVDLKFV

Query:  EPVGRELKLLGKFMDDAVSLMNKSFIDR
        EPVGRELKLLGKFMDDAV+LMNKSFIDR
Subjt:  EPVGRELKLLGKFMDDAVSLMNKSFIDR

A0A6J1FEU8 uncharacterized protein LOC111443428

3.5e-54

85.16

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Query:  MSKKGVAGGGAALSKDAPWRASGHKLTPKIHHAPVLRIPQSPFSNYALSVMKHPDPVGSGLAMDAILESAGPDCIVPGQSAPLKLLGLKIWPIEVDLKFV
        MSKKG AG    L KDAPWRA+G K TPKIHHAPVLRI QSPFSNYA+SVMKHPDP+GSGLAMDAILESAGPDCIVPGQ+AP+KLLGLK+WPI+VDLKF+
Subjt:  MSKKGVAGGGAALSKDAPWRASGHKLTPKIHHAPVLRIPQSPFSNYALSVMKHPDPVGSGLAMDAILESAGPDCIVPGQSAPLKLLGLKIWPIEVDLKFV

Query:  EPVGRELKLLGKFMDDAVSLMNKSFIDR
        EPVGR+LKLLGKFMDDAV+LMNKSFIDR
Subjt:  EPVGRELKLLGKFMDDAVSLMNKSFIDR

A0A6J1KUA5 uncharacterized protein LOC111498726

7.8e-54

85.16

Show/hide

Query:  MSKKGVAGGGAALSKDAPWRASGHKLTPKIHHAPVLRIPQSPFSNYALSVMKHPDPVGSGLAMDAILESAGPDCIVPGQSAPLKLLGLKIWPIEVDLKFV
        MSKKG AG    L KDAPWRA+  K TPKIHHAPVLRI QSPFSNYA+SVMKHPDP+GSGLAMDAILESAGPDCIVPGQ+AP+KLLGLK+WPI+VDLKF+
Subjt:  MSKKGVAGGGAALSKDAPWRASGHKLTPKIHHAPVLRIPQSPFSNYALSVMKHPDPVGSGLAMDAILESAGPDCIVPGQSAPLKLLGLKIWPIEVDLKFV

Query:  EPVGRELKLLGKFMDDAVSLMNKSFIDR
        EPVGRELKLLGKFMDDAV+LMNKSFIDR
Subjt:  EPVGRELKLLGKFMDDAVSLMNKSFIDR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G36835.1 unknown protein

2.4e-47

67.19

Show/hide

Query:  MSKKGVAGGGAALSKDAPWRASGHKLTPKIHHAPVLRIPQSPFSNYALSVMKHPDPVGSGLAMDAILESAGPDCIVPGQSAPLKLLGLKIWPIEVDLKFV
        M+KK    GGA L++DAPWR S  +  PKI  +PVL I Q+P ++YA+SVMKHP+PVG G AM+A+LESAGP+C+VPGQ  PL+LLG+K+WP+EVDLKF+
Subjt:  MSKKGVAGGGAALSKDAPWRASGHKLTPKIHHAPVLRIPQSPFSNYALSVMKHPDPVGSGLAMDAILESAGPDCIVPGQSAPLKLLGLKIWPIEVDLKFV

Query:  EPVGRELKLLGKFMDDAVSLMNKSFIDR
        EPVG+ELK+LGKFMD+AV LMNKSFIDR
Subjt:  EPVGRELKLLGKFMDDAVSLMNKSFIDR

Sequences

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CDS sequence

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ATGTCGAAGAAAGGGGTCGCCGGCGGCGGTGCAGCGCTTTCCAAGGACGCCCCATGGAGGGCTTCCGGCCACAAGCTCACTCCCAAAATCCACCACGCCCCTGTTCTTCG
CATTCCCCAATCCCCCTTTTCCAATTACGCTCTCTCCGTAATGAAGCATCCTGATCCGGTTGGAAGTGGGTTGGCGATGGATGCTATCTTAGAATCGGCTGGCCCGGATT
GTATTGTTCCTGGACAATCTGCTCCTCTTAAACTACTTGGCCTCAAGATATGGCCAATTGAAGTCGATCTCAAGTTTGTTGAGCCGGTTGGCCGAGAGCTTAAATTACTT
GGAAAGTTTATGGATGACGCCGTGAGCCTCATGAACAAGTCGTTCATAGATCGCTAG

mRNA sequence

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CTTTATTTCCGTGCTAATTAATTTTCAACCATTGTTTTTGTTTTGGACCTTTCTCCTGTTGGAGGGGTTTTGTTTCGGATGATTGTTGGCGGCGACCTTTGTGTGTGTGG
ATATTTCCTTATCTCTATATCCAAATTTAATCGGAAACAAAACCATCCATTTCTTCTCGATTATCCGCGTCTTTTCTCTTTCACCCATTTGATTTGCAGCAAACCCATCA
GCTCCGGCGAGGCGCGATTATGTCGAAGAAAGGGGTCGCCGGCGGCGGTGCAGCGCTTTCCAAGGACGCCCCATGGAGGGCTTCCGGCCACAAGCTCACTCCCAAAATCC
ACCACGCCCCTGTTCTTCGCATTCCCCAATCCCCCTTTTCCAATTACGCTCTCTCCGTAATGAAGCATCCTGATCCGGTTGGAAGTGGGTTGGCGATGGATGCTATCTTA
GAATCGGCTGGCCCGGATTGTATTGTTCCTGGACAATCTGCTCCTCTTAAACTACTTGGCCTCAAGATATGGCCAATTGAAGTCGATCTCAAGTTTGTTGAGCCGGTTGG
CCGAGAGCTTAAATTACTTGGAAAGTTTATGGATGACGCCGTGAGCCTCATGAACAAGTCGTTCATAGATCGCTAGACGTATCCGTTCGAATCGACAGAGTGTTGCATGA
AGCTGCAATTTTAGCTGGCTCCGGGAGGCAACTTATCCAACTGAACTGCCTCTACATAACTTGCTTCCTCATCTTACTGAATTCTCTCACGCAAAAAATATCCTCTGCCT
TCCAAAAGTGGGTTTGTTCCTCTCGTTTATGTGGCGTTTTCATTTGTGAATGCATGGATTTCGAATTTGCATGTGCATCTCACGCTTGTGAATTGTATAAATGGATGGAC
TAGAATGTTGATATGTGTTTGAAAAAGTTAATAAAATACGTAATTCAAAATTTTAATCGAATGAGATTAATTGAAC

Protein sequence

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MSKKGVAGGGAALSKDAPWRASGHKLTPKIHHAPVLRIPQSPFSNYALSVMKHPDPVGSGLAMDAILESAGPDCIVPGQSAPLKLLGLKIWPIEVDLKFVEPVGRELKLL
GKFMDDAVSLMNKSFIDR

Sed0016332 (gene) of Chayote v1 genome