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Sed0016364 (gene) of Chayote v1 genome

Gene IDSed0016364
OrganismSechium edule (Chayote v1)
DescriptionSel1-like protein
Genome locationLG04:21443209..21447238
RNA-Seq ExpressionSed0016364
SyntenySed0016364
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442362.1 PREDICTED: uncharacterized protein LOC103486254 [Cucumis melo]4.8e-4594.06Show/hide
Query:  MEISGGGAEALSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTCD
        MEIS GG E L+RVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD+LT D
Subjt:  MEISGGGAEALSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTCD

Query:  S
        S
Subjt:  S

XP_011651845.1 uncharacterized protein LOC101206121 [Cucumis sativus]8.3e-4594.06Show/hide
Query:  MEISGGGAEALSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTCD
        MEIS G  EAL+RVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD+LT D
Subjt:  MEISGGGAEALSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTCD

Query:  S
        S
Subjt:  S

XP_022157335.1 uncharacterized protein LOC111024062 [Momordica charantia]7.5e-4696.04Show/hide
Query:  MEISGGGAEALSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTCD
        MEIS GG E LSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLT D
Subjt:  MEISGGGAEALSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTCD

Query:  S
        S
Subjt:  S

XP_022934323.1 uncharacterized protein LOC111441521 [Cucurbita moschata]8.3e-4593.07Show/hide
Query:  MEISGGGAEALSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTCD
        MEIS GG E LSRVPLSEVVSDC KRWFKDTLKEAKAGDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD+LT D
Subjt:  MEISGGGAEALSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTCD

Query:  S
        S
Subjt:  S

XP_022971526.1 uncharacterized protein LOC111470221 [Cucurbita maxima]3.1e-4492.08Show/hide
Query:  MEISGGGAEALSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTCD
        MEIS GG EAL+RVPLSEVVSDCVKRWFKDTL EAK GDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDD+T D
Subjt:  MEISGGGAEALSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTCD

Query:  S
        S
Subjt:  S

TrEMBL top hitse value%identityAlignment
A0A1S3B5I4 uncharacterized protein LOC1034862542.3e-4594.06Show/hide
Query:  MEISGGGAEALSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTCD
        MEIS GG E L+RVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD+LT D
Subjt:  MEISGGGAEALSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTCD

Query:  S
        S
Subjt:  S

A0A5D3DNP0 Sel1-like protein2.3e-4594.06Show/hide
Query:  MEISGGGAEALSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTCD
        MEIS GG E L+RVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD+LT D
Subjt:  MEISGGGAEALSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTCD

Query:  S
        S
Subjt:  S

A0A6J1DSS4 uncharacterized protein LOC1110240623.6e-4696.04Show/hide
Query:  MEISGGGAEALSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTCD
        MEIS GG E LSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLT D
Subjt:  MEISGGGAEALSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTCD

Query:  S
        S
Subjt:  S

A0A6J1F7C2 uncharacterized protein LOC1114415214.0e-4593.07Show/hide
Query:  MEISGGGAEALSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTCD
        MEIS GG E LSRVPLSEVVSDC KRWFKDTLKEAKAGDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD+LT D
Subjt:  MEISGGGAEALSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTCD

Query:  S
        S
Subjt:  S

A0A6J1J881 uncharacterized protein LOC1114821714.0e-4593.07Show/hide
Query:  MEISGGGAEALSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTCD
        MEIS GG E LSRVPLSEVVSDC KRWFKDTLKEAKAGDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD+LT D
Subjt:  MEISGGGAEALSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTCD

Query:  S
        S
Subjt:  S

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G38450.1 CONTAINS InterPro DOMAIN/s: Sel1-like (InterPro:IPR006597)7.5e-3682.93Show/hide
Query:  VPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD
        VPLS VVSDC KRWFKDTL+EAKAG+I MQVL+GQMYYSGYGVP+DA+KGR+W+TKASR RSSVWKV DK PGYNASDSDS+
Subjt:  VPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD

AT5G05360.1 unknown protein2.2e-3571.11Show/hide
Query:  GAEALSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDD
        G++ ++RVPL++VV DCV+RWF+DTLKEAK+GD+ MQVLVGQMY SGYG+P+D  KGR W+ KASR+RSS W+VSDK PGYNASDSDS+D
Subjt:  GAEALSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDD

AT5G05360.2 unknown protein5.5e-3168.29Show/hide
Query:  GAEALSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN
        G++ ++RVPL++VV DCV+RWF+DTLKEAK+GD+ MQVLVGQMY SGYG+P+D  KGR W+ KASR+RSS W+VSDK PG N
Subjt:  GAEALSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTAGCGGAGGAGGAGCAGAAGCCCTGAGTCGCGTTCCGTTATCGGAAGTTGTTTCGGACTGCGTCAAAAGATGGTTCAAGGACACTTTGAAAGAGGCCAAGGC
TGGGGATATCAACATGCAGGTCTTGGTCGGTCAAATGTATTATAGCGGTTATGGCGTTCCTAGAGATGCTCAGAAGGGAAGAATTTGGATGACAAAAGCATCAAGAAGTC
GATCGTCAGTCTGGAAAGTTAGTGATAAACATCCAGGTTATAATGCTAGTGATTCGGATTCAGATGACTTGACGTGTGATTCTTAA
mRNA sequenceShow/hide mRNA sequence
CAAACCCCCGGTCCACTTGTTCCTTTGTCAGTATATCCTTCTCAATTTCAAAAGTCTCCAAACGCTCGACCTCTTTCCTGGGTTTTTCCCGTTCCTTCCTTTTTTTCCCC
TAACAAGCAAGAGAACCACAATTTCCGTTCCAGCCAGAACAAAGCGTTTCGGCAGCGATGGAGATTAGCGGAGGAGGAGCAGAAGCCCTGAGTCGCGTTCCGTTATCGGA
AGTTGTTTCGGACTGCGTCAAAAGATGGTTCAAGGACACTTTGAAAGAGGCCAAGGCTGGGGATATCAACATGCAGGTCTTGGTCGGTCAAATGTATTATAGCGGTTATG
GCGTTCCTAGAGATGCTCAGAAGGGAAGAATTTGGATGACAAAAGCATCAAGAAGTCGATCGTCAGTCTGGAAAGTTAGTGATAAACATCCAGGTTATAATGCTAGTGAT
TCGGATTCAGATGACTTGACGTGTGATTCTTAACTAGACCAGTGCTCTATGACATGTCAAAACCACCATTGGATGTGCTTTCACTGTGGAAACTTCACTTGCTCAGCTAT
ATTTGTAGCTGCAAAGAAGATTCGTGAACTTCCTGAATGTTGGATCTGACGGATGTAATATGCTTTGATTTTACCTTTACCTACAAACAATTTGTGGTACTTCCATGTGG
TCAAATAGGCTAAATCTCATATGCATTTTTCATTTTTCTGTTTTGGTTACACTCTTCACTGTCTGCTGGAGATTTTCATTTGATTATTGCTTAAATGTCAAATTTTGAAC
TTTTTTTTTGGTTGCTATGTCAAATTCCTTTTCAATATCAGTACGT
Protein sequenceShow/hide protein sequence
MEISGGGAEALSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTCDS