; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0016396 (gene) of Chayote v1 genome

Gene IDSed0016396
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG01:63539185..63540041
RNA-Seq ExpressionSed0016396
SyntenySed0016396
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8077623.1 hypothetical protein FH972_016172 [Carpinus fangiana]2.0e-2643.23Show/hide
Query:  MGNICVSYRIPLPCCIKHDATHNQKKVLKIVKPDGKVLEFTKPILVKDLLVDFTNSAIGSSQDGSTHLPPNFELKIGQVYYMIPSP-NSLIEDSEKSSRS
        MGN     +     CI  D     ++VL++VK DGKVLEF+ P +VKD+LV+F+ + IG S++ S HLPPN+ELK+G+VYYM+P+  +S  +D EK+ R 
Subjt:  MGNICVSYRIPLPCCIKHDATHNQKKVLKIVKPDGKVLEFTKPILVKDLLVDFTNSAIGSSQDGSTHLPPNFELKIGQVYYMIPSP-NSLIEDSEKSSRS

Query:  TKRVRIVLTKTELELFLAEKVSMEELIMQQLERSSLCSEVESSAAWKPVLAAIPE
         KR++IV+TK +L+  L +++S+E++++   +R+  C  ++S   WKP L +IPE
Subjt:  TKRVRIVLTKTELELFLAEKVSMEELIMQQLERSSLCSEVESSAAWKPVLAAIPE

KAG6752625.1 hypothetical protein POTOM_042647 [Populus tomentosa]1.7e-2545.68Show/hide
Query:  MGNICVSYRIPLP---CCIKHDATHNQKKVLKIVKPDGKVLEFTKPILVKDLLVDFTNSAIGSSQDG--STHLPPNFELKIGQVYYMIPSP---NSLIED
        MGN C+++ +  P    CI+  A   Q+KVL++VK DGKVLEF+ PILV+DLLV+F++S IG +Q+G    HLPP +ELK+G VYY++PS    + +I+ 
Subjt:  MGNICVSYRIPLP---CCIKHDATHNQKKVLKIVKPDGKVLEFTKPILVKDLLVDFTNSAIGSSQDG--STHLPPNFELKIGQVYYMIPSP---NSLIED

Query:  SEKSSRSTKRVRIVLTKTELELFLAEKVSMEELIMQQLERSSLCSEVESSAAWKPVLAAIPE
         +++S   KR+R+V+TK +L+  L +++S+EE ++ +LER S  S ++S   WKP L  IPE
Subjt:  SEKSSRSTKRVRIVLTKTELELFLAEKVSMEELIMQQLERSSLCSEVESSAAWKPVLAAIPE

XP_008437666.1 PREDICTED: uncharacterized protein LOC103483007 [Cucumis melo]8.5e-4160.48Show/hide
Query:  MGN-ICVSYRIPLPCCIKHDATHNQK--KVLKIVKPDGKVLEFTKPILVKDLLVDFTNSAIGSSQDGST--HLPPNFELKIGQVYYMIPS--------PN
        MGN  CVSY I  PCC+K DA H Q   + LKIVK DGKVL+FT P LVKD+LV+FT   IGSSQD S   HL P+FELK+GQVYYM+PS        P+
Subjt:  MGN-ICVSYRIPLPCCIKHDATHNQK--KVLKIVKPDGKVLEFTKPILVKDLLVDFTNSAIGSSQDGST--HLPPNFELKIGQVYYMIPS--------PN

Query:  SLIEDSEKSSRSTKRVRIVLTKTELELFLAEKVSMEELIMQQLERSSLCSEVESSAAWKPVLAAIPE
        + I+D  KSS ST+RVRIVLTK EL+  LA+KV+M++LIM QL+ ++L S +ESS+ WKP LAAIPE
Subjt:  SLIEDSEKSSRSTKRVRIVLTKTELELFLAEKVSMEELIMQQLERSSLCSEVESSAAWKPVLAAIPE

XP_011654573.1 uncharacterized protein LOC105435418 [Cucumis sativus]1.0e-4162.28Show/hide
Query:  MGN-ICVSYRIPLPCCIKHDATHNQK--KVLKIVKPDGKVLEFTKPILVKDLLVDFTNSAIGSSQDGS--THLPPNFELKIGQVYYMIPS--------PN
        MGN  CVSY I  PCC+K DA H Q   + LKIVK DGKVLEFT P LVKD+LV+FT   IGSSQD S   HL P FELK+GQVYYM+PS        P+
Subjt:  MGN-ICVSYRIPLPCCIKHDATHNQK--KVLKIVKPDGKVLEFTKPILVKDLLVDFTNSAIGSSQDGS--THLPPNFELKIGQVYYMIPS--------PN

Query:  SLIEDSEKSSRSTKRVRIVLTKTELELFLAEKVSMEELIMQQLERSSLCSEVESSAAWKPVLAAIPE
        S I+DS K SRST+RVRIVLTK EL+  LA++VS+E+LIM QL+ ++L S +ESS+ WKP LAAIPE
Subjt:  SLIEDSEKSSRSTKRVRIVLTKTELELFLAEKVSMEELIMQQLERSSLCSEVESSAAWKPVLAAIPE

XP_038875983.1 uncharacterized protein LOC120068327 [Benincasa hispida]3.7e-4463.86Show/hide
Query:  MGNICVSYRIPLPCCIKHDATHNQK--KVLKIVKPDGKVLEFTKPILVKDLLVDFTNSAIGSSQDGSTH--LPPNFELKIGQVYYMIPS--------PNS
        MGN CVSYRI LPCC+K DA H +K  + LKIVK DGKVLEF  P LVKD+LV+F+   IGSSQD S H  L P+FELK+GQVYYM+PS        P+S
Subjt:  MGNICVSYRIPLPCCIKHDATHNQK--KVLKIVKPDGKVLEFTKPILVKDLLVDFTNSAIGSSQDGSTH--LPPNFELKIGQVYYMIPS--------PNS

Query:  LIEDSEKSSRSTKRVRIVLTKTELELFLAEKVSMEELIMQQLERSSLCSEVESSAAWKPVLAAIPE
          EDS+KSS +TKRVRIVLTK +L+  LA++VSME+LIMQQLE+++LC+  ESS+ WKP LAAIPE
Subjt:  LIEDSEKSSRSTKRVRIVLTKTELELFLAEKVSMEELIMQQLERSSLCSEVESSAAWKPVLAAIPE

TrEMBL top hitse value%identityAlignment
A0A0A0KN21 Uncharacterized protein4.9e-4262.28Show/hide
Query:  MGN-ICVSYRIPLPCCIKHDATHNQK--KVLKIVKPDGKVLEFTKPILVKDLLVDFTNSAIGSSQDGS--THLPPNFELKIGQVYYMIPS--------PN
        MGN  CVSY I  PCC+K DA H Q   + LKIVK DGKVLEFT P LVKD+LV+FT   IGSSQD S   HL P FELK+GQVYYM+PS        P+
Subjt:  MGN-ICVSYRIPLPCCIKHDATHNQK--KVLKIVKPDGKVLEFTKPILVKDLLVDFTNSAIGSSQDGS--THLPPNFELKIGQVYYMIPS--------PN

Query:  SLIEDSEKSSRSTKRVRIVLTKTELELFLAEKVSMEELIMQQLERSSLCSEVESSAAWKPVLAAIPE
        S I+DS K SRST+RVRIVLTK EL+  LA++VS+E+LIM QL+ ++L S +ESS+ WKP LAAIPE
Subjt:  SLIEDSEKSSRSTKRVRIVLTKTELELFLAEKVSMEELIMQQLERSSLCSEVESSAAWKPVLAAIPE

A0A1S3AUP7 uncharacterized protein LOC1034830074.1e-4160.48Show/hide
Query:  MGN-ICVSYRIPLPCCIKHDATHNQK--KVLKIVKPDGKVLEFTKPILVKDLLVDFTNSAIGSSQDGST--HLPPNFELKIGQVYYMIPS--------PN
        MGN  CVSY I  PCC+K DA H Q   + LKIVK DGKVL+FT P LVKD+LV+FT   IGSSQD S   HL P+FELK+GQVYYM+PS        P+
Subjt:  MGN-ICVSYRIPLPCCIKHDATHNQK--KVLKIVKPDGKVLEFTKPILVKDLLVDFTNSAIGSSQDGST--HLPPNFELKIGQVYYMIPS--------PN

Query:  SLIEDSEKSSRSTKRVRIVLTKTELELFLAEKVSMEELIMQQLERSSLCSEVESSAAWKPVLAAIPE
        + I+D  KSS ST+RVRIVLTK EL+  LA+KV+M++LIM QL+ ++L S +ESS+ WKP LAAIPE
Subjt:  SLIEDSEKSSRSTKRVRIVLTKTELELFLAEKVSMEELIMQQLERSSLCSEVESSAAWKPVLAAIPE

A0A5A7TGH5 Uncharacterized protein4.1e-4160.48Show/hide
Query:  MGN-ICVSYRIPLPCCIKHDATHNQK--KVLKIVKPDGKVLEFTKPILVKDLLVDFTNSAIGSSQDGST--HLPPNFELKIGQVYYMIPS--------PN
        MGN  CVSY I  PCC+K DA H Q   + LKIVK DGKVL+FT P LVKD+LV+FT   IGSSQD S   HL P+FELK+GQVYYM+PS        P+
Subjt:  MGN-ICVSYRIPLPCCIKHDATHNQK--KVLKIVKPDGKVLEFTKPILVKDLLVDFTNSAIGSSQDGST--HLPPNFELKIGQVYYMIPS--------PN

Query:  SLIEDSEKSSRSTKRVRIVLTKTELELFLAEKVSMEELIMQQLERSSLCSEVESSAAWKPVLAAIPE
        + I+D  KSS ST+RVRIVLTK EL+  LA+KV+M++LIM QL+ ++L S +ESS+ WKP LAAIPE
Subjt:  SLIEDSEKSSRSTKRVRIVLTKTELELFLAEKVSMEELIMQQLERSSLCSEVESSAAWKPVLAAIPE

A0A5N6RF31 Uncharacterized protein9.9e-2743.23Show/hide
Query:  MGNICVSYRIPLPCCIKHDATHNQKKVLKIVKPDGKVLEFTKPILVKDLLVDFTNSAIGSSQDGSTHLPPNFELKIGQVYYMIPSP-NSLIEDSEKSSRS
        MGN     +     CI  D     ++VL++VK DGKVLEF+ P +VKD+LV+F+ + IG S++ S HLPPN+ELK+G+VYYM+P+  +S  +D EK+ R 
Subjt:  MGNICVSYRIPLPCCIKHDATHNQKKVLKIVKPDGKVLEFTKPILVKDLLVDFTNSAIGSSQDGSTHLPPNFELKIGQVYYMIPSP-NSLIEDSEKSSRS

Query:  TKRVRIVLTKTELELFLAEKVSMEELIMQQLERSSLCSEVESSAAWKPVLAAIPE
         KR++IV+TK +L+  L +++S+E++++   +R+  C  ++S   WKP L +IPE
Subjt:  TKRVRIVLTKTELELFLAEKVSMEELIMQQLERSSLCSEVESSAAWKPVLAAIPE

A0A6J1E387 uncharacterized protein LOC1114303963.2e-2548.05Show/hide
Query:  MGNICVSYRIPLPCCIKHDATHNQKKVLKIVKPDGKVLEFTKPILVKDLLVDFTNSAIGSSQDGSTHLPPNFELKIGQVYYMIPSPNSLIEDSEKSSRST
        MGN C SYR  LPCC+K DA HNQ + LKIVKPDGKVL FT P L                                          SL++DS+K S ST
Subjt:  MGNICVSYRIPLPCCIKHDATHNQKKVLKIVKPDGKVLEFTKPILVKDLLVDFTNSAIGSSQDGSTHLPPNFELKIGQVYYMIPSPNSLIEDSEKSSRST

Query:  KRVRIVLTKTELELFLAEKVSMEELIMQQLERSSLCSEVESSAAWKPVLAAIPE
        +RVRIVLTK +L+L + ++VSMEEL+MQQ+E+++LCS +E S++WKP LAAIPE
Subjt:  KRVRIVLTKTELELFLAEKVSMEELIMQQLERSSLCSEVESSAAWKPVLAAIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G10120.1 unknown protein1.7e-1026.67Show/hide
Query:  QKKVLKIVKPDGKVLEFTKPILVKDLLVDFT-NSAIGSSQDGSTHLPPNFELKIGQVYYMIPSPNSLIEDSEKSSRSTK---------------------
        +KKV+KI++ DGKV+E+  P+ V  +L  F+ + ++  S   + HL P  +L  G++YY++P   + I+  +K+ +  +                     
Subjt:  QKKVLKIVKPDGKVLEFTKPILVKDLLVDFT-NSAIGSSQDGSTHLPPNFELKIGQVYYMIPSPNSLIEDSEKSSRSTK---------------------

Query:  ----------RVRIVLTKTELELFLAEKVSMEELIMQQLERSSLCSEVES--SAAWKPVLAAIPE
                  RV++V++K ELE  L +  S+ E++ + L +  LC + +      W+P+L +IPE
Subjt:  ----------RVRIVLTKTELELFLAEKVSMEELIMQQLERSSLCSEVES--SAAWKPVLAAIPE

AT5G03890.1 unknown protein1.0e-1231.36Show/hide
Query:  QKKVLKIVKPDGKVLEFTKPILVKDLLVDFTNSAIGSSQDGSTHLPPNFELKIGQVYYMIPS--------------------PNSLIEDSEKSSRSTK--
        +KKV+KIV+ DGKVLE+ +PI V  +L  F+  +I  +   +THL P+ +L  G++YY++P+                       L+ + E SS S    
Subjt:  QKKVLKIVKPDGKVLEFTKPILVKDLLVDFTNSAIGSSQDGSTHLPPNFELKIGQVYYMIPS--------------------PNSLIEDSEKSSRSTK--

Query:  -----------RVRIVLTKTELELFLAEKVSMEELIMQQLERSSLCS-----EVESSAAWKPVLAAIPE
                   R++IV+ K ELE  L +  S+ E++ Q LE+  L +     ++E ++ W+P L +IPE
Subjt:  -----------RVRIVLTKTELELFLAEKVSMEELIMQQLERSSLCS-----EVESSAAWKPVLAAIPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAACATTTGTGTTTCATACAGAATCCCATTACCTTGTTGCATCAAACATGATGCAACACACAACCAAAAGAAAGTGCTAAAGATTGTAAAACCAGATGGGAAAGT
TTTGGAGTTCACTAAACCAATTCTTGTGAAGGATTTGTTGGTTGATTTTACCAACTCTGCCATTGGATCATCACAAGATGGCTCTACCCATTTGCCCCCTAACTTTGAGT
TGAAGATTGGTCAAGTTTATTACATGATTCCTTCTCCAAATTCATTGATTGAAGATTCAGAGAAAAGCAGCAGATCAACAAAGAGAGTTAGAATTGTTTTGACAAAGACA
GAGCTTGAGCTGTTTTTGGCTGAGAAAGTTTCAATGGAAGAGCTGATTATGCAGCAGCTTGAGAGGAGTAGTTTGTGTAGTGAGGTTGAATCTTCAGCAGCTTGGAAGCC
TGTATTAGCAGCCATTCCTGAGGAGTAA
mRNA sequenceShow/hide mRNA sequence
CCAAATTTGCCTCTTTCTCCTCCCATAGGCTGATTCTCCATTTTGATTCTCAAACAAACCAAAATGGGAAACATTTGTGTTTCATACAGAATCCCATTACCTTGTTGCAT
CAAACATGATGCAACACACAACCAAAAGAAAGTGCTAAAGATTGTAAAACCAGATGGGAAAGTTTTGGAGTTCACTAAACCAATTCTTGTGAAGGATTTGTTGGTTGATT
TTACCAACTCTGCCATTGGATCATCACAAGATGGCTCTACCCATTTGCCCCCTAACTTTGAGTTGAAGATTGGTCAAGTTTATTACATGATTCCTTCTCCAAATTCATTG
ATTGAAGATTCAGAGAAAAGCAGCAGATCAACAAAGAGAGTTAGAATTGTTTTGACAAAGACAGAGCTTGAGCTGTTTTTGGCTGAGAAAGTTTCAATGGAAGAGCTGAT
TATGCAGCAGCTTGAGAGGAGTAGTTTGTGTAGTGAGGTTGAATCTTCAGCAGCTTGGAAGCCTGTATTAGCAGCCATTCCTGAGGAGTAACATGATGGGAGTTGATGTT
TTGGCATCCAATTAATGTGTATAGTTTTGAAGATAGGTTAGTTTTCATGGACCGTTTTGATGTCGATAATAGTTACTCGGGTAATGGTTGTTAGTTCATTTTCATTTCGC
GTTTGGAGTTCTCTCACAACGAACATCGATTCCTTTTTAGAATCATGCAGCCTAATAATCATTAAGATATGACCCGTTAATTCATCTTATCGTAAATCTTTTTATGTACA
CTCTAAATACTGATAATAATAACTCATGTAATTGTTAATTGCATCTCAAATATAGACAATGATAATCGATTAAAAATAGTTACCATC
Protein sequenceShow/hide protein sequence
MGNICVSYRIPLPCCIKHDATHNQKKVLKIVKPDGKVLEFTKPILVKDLLVDFTNSAIGSSQDGSTHLPPNFELKIGQVYYMIPSPNSLIEDSEKSSRSTKRVRIVLTKT
ELELFLAEKVSMEELIMQQLERSSLCSEVESSAAWKPVLAAIPEE