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Sed0016397 (gene) of Chayote v1 genome

Gene IDSed0016397
OrganismSechium edule (Chayote v1)
DescriptionCytochrome c oxidase subunit
Genome locationLG03:46006283..46018790
RNA-Seq ExpressionSed0016397
SyntenySed0016397
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0045277 - respiratory chain complex IV (cellular component)
InterPro domainsIPR003213 - Cytochrome c oxidase, subunit VIb
IPR036549 - Cytochrome c oxidase, subunit VIb superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598840.1 Cytochrome c oxidase subunit 6b-2, partial [Cucurbita argyrosperma subsp. sororia]2.0e-3894.81Show/hide
Query:  MAEIELKTAPVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL
        MAE+ELKTAP DFRFPTTNQTRHCFTRYIEFHRCL AKGEESGECERF+KYYRALCPGEWVEKWNEQRENGTFPGPL
Subjt:  MAEIELKTAPVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL

XP_022153389.1 cytochrome c oxidase subunit 6b-2 [Momordica charantia]1.2e-3896.1Show/hide
Query:  MAEIELKTAPVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL
        MAEIELKTAP DFRFPTTNQTRHCFTRYIEFHRCL AKGEESGECERF+KYYRALCPGEWVEKWNEQRENGTFPGPL
Subjt:  MAEIELKTAPVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL

XP_022929560.1 cytochrome c oxidase subunit 6b-2 [Cucurbita moschata]1.2e-3896.1Show/hide
Query:  MAEIELKTAPVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL
        MAEIELKTAP DFRFPTTNQTRHCFTRYIEFHRCL AKGEESGECERF+KYYRALCPGEWVEKWNEQRENGTFPGPL
Subjt:  MAEIELKTAPVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL

XP_022937604.1 cytochrome c oxidase subunit 6b-2-like [Cucurbita moschata]1.2e-3896.1Show/hide
Query:  MAEIELKTAPVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL
        MAEIELKTAP DFRFPTTNQTRHCFTRYIEFHRCL AKGEESGECERF+KYYRALCPGEWVEKWNEQRENGTFPGPL
Subjt:  MAEIELKTAPVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL

XP_022997477.1 cytochrome c oxidase subunit 6b-2 [Cucurbita maxima]2.6e-3894.81Show/hide
Query:  MAEIELKTAPVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL
        MAEIELKTAP DFRFPTTNQTRHCFTRYIEFHRCL AKGEESGECERF+KYYRALCPGEWVE+WNEQRENGTFPGPL
Subjt:  MAEIELKTAPVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL

TrEMBL top hitse value%identityAlignment
A0A6J1DIX3 Cytochrome c oxidase subunit5.6e-3996.1Show/hide
Query:  MAEIELKTAPVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL
        MAEIELKTAP DFRFPTTNQTRHCFTRYIEFHRCL AKGEESGECERF+KYYRALCPGEWVEKWNEQRENGTFPGPL
Subjt:  MAEIELKTAPVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL

A0A6J1EUQ5 Cytochrome c oxidase subunit5.6e-3996.1Show/hide
Query:  MAEIELKTAPVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL
        MAEIELKTAP DFRFPTTNQTRHCFTRYIEFHRCL AKGEESGECERF+KYYRALCPGEWVEKWNEQRENGTFPGPL
Subjt:  MAEIELKTAPVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL

A0A6J1FBN5 Cytochrome c oxidase subunit5.6e-3996.1Show/hide
Query:  MAEIELKTAPVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL
        MAEIELKTAP DFRFPTTNQTRHCFTRYIEFHRCL AKGEESGECERF+KYYRALCPGEWVEKWNEQRENGTFPGPL
Subjt:  MAEIELKTAPVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL

A0A6J1I3B0 Cytochrome c oxidase subunit1.2e-3894.81Show/hide
Query:  MAEIELKTAPVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL
        MAEIELKTAP DFRFPTTNQTRHCFTRYIEFHRCL AKGEESGECERF+KYYRALCPGEWVEKWN+QRENGTFPGPL
Subjt:  MAEIELKTAPVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL

A0A6J1K554 Cytochrome c oxidase subunit1.2e-3894.81Show/hide
Query:  MAEIELKTAPVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL
        MAEIELKTAP DFRFPTTNQTRHCFTRYIEFHRCL AKGEESGECERF+KYYRALCPGEWVE+WNEQRENGTFPGPL
Subjt:  MAEIELKTAPVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL

SwissProt top hitse value%identityAlignment
O94581 Cytochrome c oxidase subunit 12, mitochondrial3.0e-2158.57Show/hide
Query:  TAPVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL
        T   D RFP TNQT+HCF  YI++ RC+ AKGE+   C++F   Y++LCP EWVE+W+EQRENGTFP P+
Subjt:  TAPVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL

P14854 Cytochrome c oxidase subunit 6B15.2e-1851.35Show/hide
Query:  KTAPVDFRFPTTNQTRHCFTRYIEFHRC---LMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL
        KTAP D RFP  NQTR+C+  Y++FHRC   + AKG +   CE + + Y++LCP  WV  W+EQR  GTFPG +
Subjt:  KTAPVDFRFPTTNQTRHCFTRYIEFHRC---LMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL

Q945L0 Cytochrome c oxidase subunit 6b-25.9e-3889.33Show/hide
Query:  EIELKTAPVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL
        EIELKTAP DFRFPTTNQTRHCFTRYIEFHRC  AKGEES +CERF+KYYRALCPGEWV+KWNEQRE+GTFPGPL
Subjt:  EIELKTAPVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL

Q9S7L9 Cytochrome c oxidase subunit 6b-16.8e-3474.67Show/hide
Query:  EIELKTAPVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL
        EI+L+TAP DFRFPTTNQTRHCFTRY+E+HRC+ AKG+++ EC++F+K+YR+LCP EWV++WNEQRENGTFPGPL
Subjt:  EIELKTAPVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL

Q9SUD3 Cytochrome c oxidase subunit 6b-31.7e-3788Show/hide
Query:  EIELKTAPVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL
        EIELKTAP DFRFPTTNQTRHCFTRYIEFHRC  AKGE++ ECERF+KYYRALCPGEWV+KWNEQRE GTFPGPL
Subjt:  EIELKTAPVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL

Arabidopsis top hitse value%identityAlignment
AT1G22450.1 cytochrome C oxidase 6B4.8e-3574.67Show/hide
Query:  EIELKTAPVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL
        EI+L+TAP DFRFPTTNQTRHCFTRY+E+HRC+ AKG+++ EC++F+K+YR+LCP EWV++WNEQRENGTFPGPL
Subjt:  EIELKTAPVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL

AT1G32710.1 Cytochrome c oxidase, subunit Vib family protein5.7e-1241.27Show/hide
Query:  APVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEK-WNEQREN
        A V+ RFP TN+TRHCF R++++H+C+   G ++ +C     Y R++CP E V K W +   N
Subjt:  APVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEK-WNEQREN

AT4G28060.1 Cytochrome c oxidase, subunit Vib family protein1.2e-3888Show/hide
Query:  EIELKTAPVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL
        EIELKTAP DFRFPTTNQTRHCFTRYIEFHRC  AKGE++ ECERF+KYYRALCPGEWV+KWNEQRE GTFPGPL
Subjt:  EIELKTAPVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL

AT5G57815.1 Cytochrome c oxidase, subunit Vib family protein4.2e-3989.33Show/hide
Query:  EIELKTAPVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL
        EIELKTAP DFRFPTTNQTRHCFTRYIEFHRC  AKGEES +CERF+KYYRALCPGEWV+KWNEQRE+GTFPGPL
Subjt:  EIELKTAPVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGAAATTGAGCTTAAAACAGCACCTGTTGACTTTCGATTCCCTACAACAAATCAAACAAGGCATTGCTTCACTCGTTACATTGAGTTCCACAGGTGCCTGATGGC
AAAGGGTGAAGAGTCTGGTGAATGCGAGCGATTTTCCAAGTATTATCGTGCCCTTTGCCCTGGTGAATGGGTCGAAAAATGGAACGAGCAGAGAGAGAACGGCACTTTCC
CTGGCCCACTTTAA
mRNA sequenceShow/hide mRNA sequence
AACAGGCGGTCTTGAATGGGCCAACGTAGGCCCATATATAAGTTAGGCCCATTAAAGAGTTTTTATACGATCGTCTTTTCGTTCAACATAAACTGCGCCTTCGTCCCCGT
TATCACAGAGTCTTCCGGTTGAAATCCTCCATTTCTTGGAGCTTGAATCCGATCAGTCATGGCCGAAATTGAGCTTAAAACAGCACCTGTTGACTTTCGATTCCCTACAA
CAAATCAAACAAGGCATTGCTTCACTCGTTACATTGAGTTCCACAGGTGCCTGATGGCAAAGGGTGAAGAGTCTGGTGAATGCGAGCGATTTTCCAAGTATTATCGTGCC
CTTTGCCCTGGTGAATGGGTCGAAAAATGGAACGAGCAGAGAGAGAACGGCACTTTCCCTGGCCCACTTTAAAAGAATGTTCATCCCACCCGGAAAGCACAGTGTGTGAA
TTTATGTTTGCTCTCAAGTTTCATCAAGAAACTGTTTCAAAGTTCTATACTTCTTCATTGCATCTCAGAAAATAATAAACTATAGCATTTCGTTTCAACTCTTCTCGAGT
AGTTATGACTCAATTGTTGGTTGTGAACATGGTGAATTGATCCAATGCACCTTGACATTTGTCGACCCTTTTCGTCCATTTAACGACCATTTCAAGTGATTTTTTTTAAA
CCTGTGTAATTTGATCTTTATTTGCACCCTACTCTGCATATTTTATTGTTAGTTTTTGAAAATGGTTTTTTAGCGTTCAGAACAGATGAAAGCAACCATGGATAAGCGCT
CTAAATTGGACAGAGTCGCCTGAGAAAAGCACTAAG
Protein sequenceShow/hide protein sequence
MAEIELKTAPVDFRFPTTNQTRHCFTRYIEFHRCLMAKGEESGECERFSKYYRALCPGEWVEKWNEQRENGTFPGPL