; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0016408 (gene) of Chayote v1 genome

Gene IDSed0016408
OrganismSechium edule (Chayote v1)
DescriptionDNA polymerase kappa
Genome locationLG07:9455937..9458092
RNA-Seq ExpressionSed0016408
SyntenySed0016408
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014938.1 hypothetical protein SDJN02_22569, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-8274.01Show/hide
Query:  MNFTIPILQFPQ----IPKALNTKIHASNSQS--------PLP---PKPPIA------RNIPTMAEIVAAGEAQNLNLRLQTLGPFFRITAKSSESGREI
        M  T+PI   PQ    I +AL TK H ++S S        PLP   PKPP A         PTMAEI+AAGEAQN++LRLQTLGPFFRITAKS ES REI
Subjt:  MNFTIPILQFPQ----IPKALNTKIHASNSQS--------PLP---PKPPIA------RNIPTMAEIVAAGEAQNLNLRLQTLGPFFRITAKSSESGREI

Query:  GKAEGLIRAWRRGKVLHLDSIRLNRESLGMEKSIFGIGLFIGAVAIRYGFDCGCDTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLGDIGDMVV
        GKAEGLIR W RG++LHLDSIRL RESLGMEKSIFG+GLFIGAVAIRYG+DCGC TAELLAINDSDLYHSKLVRFYTRIGFK++YEVSGSK+GDIGDM+V
Subjt:  GKAEGLIRAWRRGKVLHLDSIRLNRESLGMEKSIFGIGLFIGAVAIRYGFDCGCDTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLGDIGDMVV

Query:  WGGVGTRMDANIEALLLKWCTRFKSPS
        WGGVGTRMDA IEALLLKWC+RFKS S
Subjt:  WGGVGTRMDANIEALLLKWCTRFKSPS

XP_008454398.1 PREDICTED: uncharacterized protein LOC103494815 [Cucumis melo]2.2e-8475.66Show/hide
Query:  FTIPILQFPQIPKALN------TKIHAS------NSQSPLPPKPPIA------RNIPTMAEIVAAGEAQNLNLRLQTLGPFFRITAKSSESGREIGKAEG
        FTI I   P+IP  ++      TKIHAS      NSQ PLP K  I        NIPTMAEIVAAGE+QNL+LRLQTLGPFFRITAKS E+ REIGKAEG
Subjt:  FTIPILQFPQIPKALN------TKIHAS------NSQSPLPPKPPIA------RNIPTMAEIVAAGEAQNLNLRLQTLGPFFRITAKSSESGREIGKAEG

Query:  LIRAWRRGKVLHLDSIRLNRESLGMEKSIFGIGLFIGAVAIRYGFDCGCDTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLGDIGDMVVWGGVG
        L+R W  GK+LHLDSIRLNRESLGMEKSIFG+GLFIGAVAIRYG+DCGC TAELLAINDSDLYHSKLVRFYTRIGFK+MYEVSGSKL DIGDMVVWGG+G
Subjt:  LIRAWRRGKVLHLDSIRLNRESLGMEKSIFGIGLFIGAVAIRYGFDCGCDTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLGDIGDMVVWGGVG

Query:  TRMDANIEALLLKWCTRFKSPSQKSR
        TRMDA IE+LLLKWCTRFKSPS  ++
Subjt:  TRMDANIEALLLKWCTRFKSPSQKSR

XP_022149148.1 uncharacterized protein LOC111017637 [Momordica charantia]1.1e-8377.03Show/hide
Query:  MNFTIPILQFPQ----IPKALNTKIHAS--------NSQSPLP---PKPPIAR--NIPTMAEIVAAGEAQNLNLRLQTLGPFFRITAKSSESGREIGKAE
        M FT  I + PQ    IP+ L +KIHAS        NSQ P P   PKP  +R  NIPTM EI+AAG AQNL+LRLQTLGPFFRITAKS+ES REIGKAE
Subjt:  MNFTIPILQFPQ----IPKALNTKIHAS--------NSQSPLP---PKPPIAR--NIPTMAEIVAAGEAQNLNLRLQTLGPFFRITAKSSESGREIGKAE

Query:  GLIRAWRRGKVLHLDSIRLNRESLGMEKSIFGIGLFIGAVAIRYGFDCGCDTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLGDIGDMVVWGGV
        GLIR W  G++LHLDSIRLNRESLGMEKSIFG+GLFIGAVAIRYGFDCGC TAELLAINDSDLYHSKLVRFYTRIGFK+MYEVSGSK+GD GDM+VWGGV
Subjt:  GLIRAWRRGKVLHLDSIRLNRESLGMEKSIFGIGLFIGAVAIRYGFDCGCDTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLGDIGDMVVWGGV

Query:  GTRMDANIEALLLKWCTRFKSP
        GTRMDA+IE LLLKWCTRFKSP
Subjt:  GTRMDANIEALLLKWCTRFKSP

XP_022922749.1 uncharacterized protein LOC111430648 [Cucurbita moschata]2.1e-8274.01Show/hide
Query:  MNFTIPILQFPQ----IPKALNTKIHASNSQS--------PLP---PKP------PIARNIPTMAEIVAAGEAQNLNLRLQTLGPFFRITAKSSESGREI
        M  T+PI + PQ    I +AL TK H ++S S        PLP   PKP      P     PTMAEIVAAGEAQN++LRLQTLGPFFRITAKS ES REI
Subjt:  MNFTIPILQFPQ----IPKALNTKIHASNSQS--------PLP---PKP------PIARNIPTMAEIVAAGEAQNLNLRLQTLGPFFRITAKSSESGREI

Query:  GKAEGLIRAWRRGKVLHLDSIRLNRESLGMEKSIFGIGLFIGAVAIRYGFDCGCDTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLGDIGDMVV
        GKAEGLIR W RG++LHLDSIRL RESLGMEKSIFG+GLFIGAVAIRYG+DCGC TAELLAINDSDLYHSKLVRFYTRIGFK++YEVSGSK+GDIGDM+V
Subjt:  GKAEGLIRAWRRGKVLHLDSIRLNRESLGMEKSIFGIGLFIGAVAIRYGFDCGCDTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLGDIGDMVV

Query:  WGGVGTRMDANIEALLLKWCTRFKSPS
        WGGVGTRMDA IEALLLKWC+RFKS S
Subjt:  WGGVGTRMDANIEALLLKWCTRFKSPS

XP_038903453.1 uncharacterized protein LOC120090038 [Benincasa hispida]1.8e-8678.34Show/hide
Query:  MNFTIPILQFPQ----IPKALNTKIHAS----NSQSPLPPK---PPIARNIPTMAEIVAAGEAQNLNLRLQTLGPFFRITAKSSESGREIGKAEGLIRAW
        M FTI I + PQ    I + LN KIHAS    NSQ PLP K    P A NIPTM+EI+AAG+AQNL LRLQTLGPFFRITAKS ES REIGKAEGL+R W
Subjt:  MNFTIPILQFPQ----IPKALNTKIHAS----NSQSPLPPK---PPIARNIPTMAEIVAAGEAQNLNLRLQTLGPFFRITAKSSESGREIGKAEGLIRAW

Query:  RRGKVLHLDSIRLNRESLGMEKSIFGIGLFIGAVAIRYGFDCGCDTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLGDIGDMVVWGGVGTRMDA
         RGK+LHL+SIRLNRESLGMEKSIFG+GLFIGAVAIRYG+DCGC TAELLAINDSDLYHSKLVRFYTRIGFK+MYEVSG+KL DIGDM+VWGG+GTRMDA
Subjt:  RRGKVLHLDSIRLNRESLGMEKSIFGIGLFIGAVAIRYGFDCGCDTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLGDIGDMVVWGGVGTRMDA

Query:  NIEALLLKWCTRFKSPS
        +I+ALLLKWCTRFK PS
Subjt:  NIEALLLKWCTRFKSPS

TrEMBL top hitse value%identityAlignment
A0A0A0KT41 Uncharacterized protein2.5e-8176.89Show/hide
Query:  FTIPILQFPQIPKALN---TKIHAS------NSQSPLPPK--PPIARNIPTMAEIVAAGEAQNLNLRLQTLGPFFRITAKSSESGREIGKAEGLIRAWRR
        FTI I + P     ++   TKIHAS      NSQ PLP K       NIPTMAEIVAAGEAQNL+LRLQTLGPFFRITAKS  + REIGKAEGL+R W  
Subjt:  FTIPILQFPQIPKALN---TKIHAS------NSQSPLPPK--PPIARNIPTMAEIVAAGEAQNLNLRLQTLGPFFRITAKSSESGREIGKAEGLIRAWRR

Query:  GKVLHLDSIRLNRESLGMEKSIFGIGLFIGAVAIRYGFDCGCDTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLGDIGDMVVWGGVGTRMDANI
        GK+LHLDSIRLNRESLGMEKSIFG+GLFIGAVAIRYG+DCGC TAELLAINDSDLYHSKLVRFYTRIGFK+MYEVSGSKL DIGDM+VWGG+GTRMDA I
Subjt:  GKVLHLDSIRLNRESLGMEKSIFGIGLFIGAVAIRYGFDCGCDTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLGDIGDMVVWGGVGTRMDANI

Query:  EALLLKWCTRFK
        ++LLLKWCTRFK
Subjt:  EALLLKWCTRFK

A0A1S3BZR1 uncharacterized protein LOC1034948151.1e-8475.66Show/hide
Query:  FTIPILQFPQIPKALN------TKIHAS------NSQSPLPPKPPIA------RNIPTMAEIVAAGEAQNLNLRLQTLGPFFRITAKSSESGREIGKAEG
        FTI I   P+IP  ++      TKIHAS      NSQ PLP K  I        NIPTMAEIVAAGE+QNL+LRLQTLGPFFRITAKS E+ REIGKAEG
Subjt:  FTIPILQFPQIPKALN------TKIHAS------NSQSPLPPKPPIA------RNIPTMAEIVAAGEAQNLNLRLQTLGPFFRITAKSSESGREIGKAEG

Query:  LIRAWRRGKVLHLDSIRLNRESLGMEKSIFGIGLFIGAVAIRYGFDCGCDTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLGDIGDMVVWGGVG
        L+R W  GK+LHLDSIRLNRESLGMEKSIFG+GLFIGAVAIRYG+DCGC TAELLAINDSDLYHSKLVRFYTRIGFK+MYEVSGSKL DIGDMVVWGG+G
Subjt:  LIRAWRRGKVLHLDSIRLNRESLGMEKSIFGIGLFIGAVAIRYGFDCGCDTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLGDIGDMVVWGGVG

Query:  TRMDANIEALLLKWCTRFKSPSQKSR
        TRMDA IE+LLLKWCTRFKSPS  ++
Subjt:  TRMDANIEALLLKWCTRFKSPSQKSR

A0A6J1D616 uncharacterized protein LOC1110176375.3e-8477.03Show/hide
Query:  MNFTIPILQFPQ----IPKALNTKIHAS--------NSQSPLP---PKPPIAR--NIPTMAEIVAAGEAQNLNLRLQTLGPFFRITAKSSESGREIGKAE
        M FT  I + PQ    IP+ L +KIHAS        NSQ P P   PKP  +R  NIPTM EI+AAG AQNL+LRLQTLGPFFRITAKS+ES REIGKAE
Subjt:  MNFTIPILQFPQ----IPKALNTKIHAS--------NSQSPLP---PKPPIAR--NIPTMAEIVAAGEAQNLNLRLQTLGPFFRITAKSSESGREIGKAE

Query:  GLIRAWRRGKVLHLDSIRLNRESLGMEKSIFGIGLFIGAVAIRYGFDCGCDTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLGDIGDMVVWGGV
        GLIR W  G++LHLDSIRLNRESLGMEKSIFG+GLFIGAVAIRYGFDCGC TAELLAINDSDLYHSKLVRFYTRIGFK+MYEVSGSK+GD GDM+VWGGV
Subjt:  GLIRAWRRGKVLHLDSIRLNRESLGMEKSIFGIGLFIGAVAIRYGFDCGCDTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLGDIGDMVVWGGV

Query:  GTRMDANIEALLLKWCTRFKSP
        GTRMDA+IE LLLKWCTRFKSP
Subjt:  GTRMDANIEALLLKWCTRFKSP

A0A6J1E4B2 uncharacterized protein LOC1114306481.0e-8274.01Show/hide
Query:  MNFTIPILQFPQ----IPKALNTKIHASNSQS--------PLP---PKP------PIARNIPTMAEIVAAGEAQNLNLRLQTLGPFFRITAKSSESGREI
        M  T+PI + PQ    I +AL TK H ++S S        PLP   PKP      P     PTMAEIVAAGEAQN++LRLQTLGPFFRITAKS ES REI
Subjt:  MNFTIPILQFPQ----IPKALNTKIHASNSQS--------PLP---PKP------PIARNIPTMAEIVAAGEAQNLNLRLQTLGPFFRITAKSSESGREI

Query:  GKAEGLIRAWRRGKVLHLDSIRLNRESLGMEKSIFGIGLFIGAVAIRYGFDCGCDTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLGDIGDMVV
        GKAEGLIR W RG++LHLDSIRL RESLGMEKSIFG+GLFIGAVAIRYG+DCGC TAELLAINDSDLYHSKLVRFYTRIGFK++YEVSGSK+GDIGDM+V
Subjt:  GKAEGLIRAWRRGKVLHLDSIRLNRESLGMEKSIFGIGLFIGAVAIRYGFDCGCDTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLGDIGDMVV

Query:  WGGVGTRMDANIEALLLKWCTRFKSPS
        WGGVGTRMDA IEALLLKWC+RFKS S
Subjt:  WGGVGTRMDANIEALLLKWCTRFKSPS

A0A6J1JB84 uncharacterized protein LOC1114828884.2e-8172.69Show/hide
Query:  MNFTIPILQFPQ----IPKALNTKIHASNSQS--------PLP---PKPPIA------RNIPTMAEIVAAGEAQNLNLRLQTLGPFFRITAKSSESGREI
        M  T+PI + PQ    I +AL TK H S+S S        PLP   PKPP A         PTMAEI+AAGEAQN++LRLQTLGPFFRITAKS ES REI
Subjt:  MNFTIPILQFPQ----IPKALNTKIHASNSQS--------PLP---PKPPIA------RNIPTMAEIVAAGEAQNLNLRLQTLGPFFRITAKSSESGREI

Query:  GKAEGLIRAWRRGKVLHLDSIRLNRESLGMEKSIFGIGLFIGAVAIRYGFDCGCDTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLGDIGDMVV
        GKAEGLIR W RG++LHLDSIRL RESLGMEKSIFG+GLFIGAVAIRYG+DCGC TAELLAINDSDLYHSKLVRFYTRIGF+++YEVSGS +GDIGDM+V
Subjt:  GKAEGLIRAWRRGKVLHLDSIRLNRESLGMEKSIFGIGLFIGAVAIRYGFDCGCDTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLGDIGDMVV

Query:  WGGVGTRMDANIEALLLKWCTRFKSPS
        WGGVGTRMDA IE LL KWC+RFKS S
Subjt:  WGGVGTRMDANIEALLLKWCTRFKSPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTTCACAATCCCAATTCTCCAATTTCCCCAAATCCCCAAAGCCCTAAACACCAAAATCCACGCCTCCAACTCCCAATCACCTCTCCCACCAAAACCCCCAATCGC
TCGAAACATCCCGACGATGGCGGAGATCGTGGCGGCCGGCGAGGCGCAGAATCTGAACCTCCGGCTGCAAACACTGGGGCCGTTTTTCAGAATTACGGCGAAAAGCTCGG
AATCGGGCCGGGAGATCGGGAAGGCGGAGGGACTGATAAGAGCGTGGAGGCGAGGAAAGGTTCTTCATCTGGATTCGATTCGATTGAACCGAGAGAGCTTGGGAATGGAG
AAATCGATCTTCGGAATCGGATTGTTCATCGGCGCCGTTGCGATTCGGTACGGGTTCGATTGCGGCTGCGACACGGCGGAGTTGTTGGCCATTAATGATTCCGATCTCTA
CCATTCTAAGCTGGTTAGATTCTACACAAGGATTGGGTTCAAGACAATGTATGAAGTGAGTGGTTCAAAATTAGGAGACATTGGAGACATGGTGGTGTGGGGAGGGGTTG
GGACTAGAATGGATGCAAACATTGAAGCCCTTCTACTCAAATGGTGTACTAGGTTCAAATCTCCATCACAAAAATCAAGGTAA
mRNA sequenceShow/hide mRNA sequence
CTTACTAATGGTGAACTCTTGAAAAATGTAGATATTTTTTGAAAAATGAATAACTATTATTATTATAATTTGACAATTCAGCCCAAAATTCATATAAACCTTACAAGTAA
AAAAAAAACCCATCAATCTTCGAACAGATAAGTGAATAAACACAAACACTCCCACCATTAATGAACTTCACAATCCCAATTCTCCAATTTCCCCAAATCCCCAAAGCCCT
AAACACCAAAATCCACGCCTCCAACTCCCAATCACCTCTCCCACCAAAACCCCCAATCGCTCGAAACATCCCGACGATGGCGGAGATCGTGGCGGCCGGCGAGGCGCAGA
ATCTGAACCTCCGGCTGCAAACACTGGGGCCGTTTTTCAGAATTACGGCGAAAAGCTCGGAATCGGGCCGGGAGATCGGGAAGGCGGAGGGACTGATAAGAGCGTGGAGG
CGAGGAAAGGTTCTTCATCTGGATTCGATTCGATTGAACCGAGAGAGCTTGGGAATGGAGAAATCGATCTTCGGAATCGGATTGTTCATCGGCGCCGTTGCGATTCGGTA
CGGGTTCGATTGCGGCTGCGACACGGCGGAGTTGTTGGCCATTAATGATTCCGATCTCTACCATTCTAAGCTGGTTAGATTCTACACAAGGATTGGGTTCAAGACAATGT
ATGAAGTGAGTGGTTCAAAATTAGGAGACATTGGAGACATGGTGGTGTGGGGAGGGGTTGGGACTAGAATGGATGCAAACATTGAAGCCCTTCTACTCAAATGGTGTACT
AGGTTCAAATCTCCATCACAAAAATCAAGGTAACCCTAAAATGGGATTTTCCCTTGAGTTCTACTTTTTTTGTTAAATTGTTGGAAACTCCCAATTAATATGTACAAATT
TTGTTAATTTGTAACTAAGATGTACCATATGTTTTTAGGTGAGTAATTTAATATTTTGGTTGTGTCTAGAGATCGTTTATATAAATGAGGTTGAGTTATTATAACACAAC
CTATGTTTGGATCATTGGTTTGAAAAATCAAAATCCATCATTTCATTTAAAAATAATATCTTTTTTTGTTTCA
Protein sequenceShow/hide protein sequence
MNFTIPILQFPQIPKALNTKIHASNSQSPLPPKPPIARNIPTMAEIVAAGEAQNLNLRLQTLGPFFRITAKSSESGREIGKAEGLIRAWRRGKVLHLDSIRLNRESLGME
KSIFGIGLFIGAVAIRYGFDCGCDTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLGDIGDMVVWGGVGTRMDANIEALLLKWCTRFKSPSQKSR