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Sed0016419 (gene) of Chayote v1 genome

Gene IDSed0016419
OrganismSechium edule (Chayote v1)
DescriptionL10-interacting MYB domain-containing protein-like
Genome locationLG02:39368208..39369081
RNA-Seq ExpressionSed0016419
SyntenySed0016419
Gene Ontology termsNA
InterPro domainsIPR024752 - Myb/SANT-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053615.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]2.0e-3545.77Show/hide
Query:  MSGSGWDPLLGTITLEEEQWIDLFKVNKRAKKFRKSGCSDYVKLMRIFGDTTATGVCTGPSARFPSDS--ENENDVGING--------------------
        M+G+GWDPLLGTI LEEEQW +LFKVNKRAKKFRKSGC  Y KL+RIFGDTTATGV   PS R  SDS  ENENDV  N                     
Subjt:  MSGSGWDPLLGTITLEEEQWIDLFKVNKRAKKFRKSGCSDYVKLMRIFGDTTATGVCTGPSARFPSDS--ENENDVGING--------------------

Query:  ------------------------------------------------------IDILNAMDELDGETYAKVLKLLHGDVTWRKIFLRIPDARKRDLIYS
                                                              +DILN M+++DGE Y+K+LKLLHGD+ WRK+FLR+PD+RKRD I S
Subjt:  ------------------------------------------------------IDILNAMDELDGETYAKVLKLLHGDVTWRKIFLRIPDARKRDLIYS

Query:  L
        L
Subjt:  L

KAF3457451.1 hypothetical protein FNV43_RR02109 [Rhamnella rubrinervis]5.3e-3635.97Show/hide
Query:  MDEEVAKGNHPTTTFTKTSWNYMRTKLNDSTGYAYTHDQLKN----------------NDMSGSGWDPLLGTITLEEEQWIDLFKVNKRAKKFRKSGCSD
        M++EV KGN  TTTFTK+SWNY+R +L    G++YTHDQLKN                   +G GW+P LGTITL++  W +L KVNK AKKFRK GC  
Subjt:  MDEEVAKGNHPTTTFTKTSWNYMRTKLNDSTGYAYTHDQLKN----------------NDMSGSGWDPLLGTITLEEEQWIDLFKVNKRAKKFRKSGCSD

Query:  YVKLMRIFGDTTATGVCTGPSARFPSDSENENDVGINGID------------------------------------------------------------
        Y KL  I+ DT ATG  + PS R PSDSE+ N +    +D                                                            
Subjt:  YVKLMRIFGDTTATGVCTGPSARFPSDSENENDVGINGID------------------------------------------------------------

Query:  ---------------------------------ILNAMDELDGETYAKVLKLLHGDVTWRKIFLRIPDARKRDLIYSL
                                         ILN MDE+DG++Y+K +KLLH DVTWRK+FL +PD RK D I SL
Subjt:  ---------------------------------ILNAMDELDGETYAKVLKLLHGDVTWRKIFLRIPDARKRDLIYSL

XP_038904552.1 L10-interacting MYB domain-containing protein-like isoform X1 [Benincasa hispida]2.8e-3737.74Show/hide
Query:  MDEEVAKGNHPTTTFTKTSWNYMRTKLNDSTGYAYTHDQLKN----------------NDMSGSGWDPLLGTITLEEEQWIDLFKVNKRAKKFRKSGCSD
        M+EEVAKGN PTTTFTKTSW Y++ +L   TGYAYTH+QLKN                 D++G GWDP+LGTITLEEEQW +L KVNK+ KKF+KSGC  
Subjt:  MDEEVAKGNHPTTTFTKTSWNYMRTKLNDSTGYAYTHDQLKN----------------NDMSGSGWDPLLGTITLEEEQWIDLFKVNKRAKKFRKSGCSD

Query:  YVKLMRIFGDTTATGVCTGPSARFPSDSENEN--------------------------------------------------------------DVGING
        Y KLMRI+GDT A      PS++  SDSE +N                                                               +G + 
Subjt:  YVKLMRIFGDTTATGVCTGPSARFPSDSENEN--------------------------------------------------------------DVGING

Query:  ID---------------------ILNAMDELDGETYAKVLKLLHGDVTWRKIFLRIPDARKRDLI
        +D                     ILN+M ++D + Y K+LK L  D TWRK FL IP++R++  I
Subjt:  ID---------------------ILNAMDELDGETYAKVLKLLHGDVTWRKIFLRIPDARKRDLI

XP_038904553.1 L10-interacting MYB domain-containing protein-like isoform X2 [Benincasa hispida]2.8e-3737.74Show/hide
Query:  MDEEVAKGNHPTTTFTKTSWNYMRTKLNDSTGYAYTHDQLKN----------------NDMSGSGWDPLLGTITLEEEQWIDLFKVNKRAKKFRKSGCSD
        M+EEVAKGN PTTTFTKTSW Y++ +L   TGYAYTH+QLKN                 D++G GWDP+LGTITLEEEQW +L KVNK+ KKF+KSGC  
Subjt:  MDEEVAKGNHPTTTFTKTSWNYMRTKLNDSTGYAYTHDQLKN----------------NDMSGSGWDPLLGTITLEEEQWIDLFKVNKRAKKFRKSGCSD

Query:  YVKLMRIFGDTTATGVCTGPSARFPSDSENEN--------------------------------------------------------------DVGING
        Y KLMRI+GDT A      PS++  SDSE +N                                                               +G + 
Subjt:  YVKLMRIFGDTTATGVCTGPSARFPSDSENEN--------------------------------------------------------------DVGING

Query:  ID---------------------ILNAMDELDGETYAKVLKLLHGDVTWRKIFLRIPDARKRDLI
        +D                     ILN+M ++D + Y K+LK L  D TWRK FL IP++R++  I
Subjt:  ID---------------------ILNAMDELDGETYAKVLKLLHGDVTWRKIFLRIPDARKRDLI

XP_038904554.1 L10-interacting MYB domain-containing protein-like isoform X3 [Benincasa hispida]2.8e-3737.74Show/hide
Query:  MDEEVAKGNHPTTTFTKTSWNYMRTKLNDSTGYAYTHDQLKN----------------NDMSGSGWDPLLGTITLEEEQWIDLFKVNKRAKKFRKSGCSD
        M+EEVAKGN PTTTFTKTSW Y++ +L   TGYAYTH+QLKN                 D++G GWDP+LGTITLEEEQW +L KVNK+ KKF+KSGC  
Subjt:  MDEEVAKGNHPTTTFTKTSWNYMRTKLNDSTGYAYTHDQLKN----------------NDMSGSGWDPLLGTITLEEEQWIDLFKVNKRAKKFRKSGCSD

Query:  YVKLMRIFGDTTATGVCTGPSARFPSDSENEN--------------------------------------------------------------DVGING
        Y KLMRI+GDT A      PS++  SDSE +N                                                               +G + 
Subjt:  YVKLMRIFGDTTATGVCTGPSARFPSDSENEN--------------------------------------------------------------DVGING

Query:  ID---------------------ILNAMDELDGETYAKVLKLLHGDVTWRKIFLRIPDARKRDLI
        +D                     ILN+M ++D + Y K+LK L  D TWRK FL IP++R++  I
Subjt:  ID---------------------ILNAMDELDGETYAKVLKLLHGDVTWRKIFLRIPDARKRDLI

TrEMBL top hitse value%identityAlignment
A0A1S3B8P1 uncharacterized protein LOC103487000 isoform X16.3e-3537.55Show/hide
Query:  MDEEVAKGNHPTTTFTKTSWNYMRTKLNDSTGYAYTHDQLKN----------------NDMSGSGWDPLLGTITLEEEQWIDLFKVNKRAKKFRKSGCSD
        M++EVAKGN PTTTFTKTSW Y++ +L   TGYAY+H+QLKN                +D++G GWDP+LGTITL E QW +L KVNK AKKF+KSGC  
Subjt:  MDEEVAKGNHPTTTFTKTSWNYMRTKLNDSTGYAYTHDQLKN----------------NDMSGSGWDPLLGTITLEEEQWIDLFKVNKRAKKFRKSGCSD

Query:  YVKLMRIFGDTTATGVCTG-PSARFPSDSENEN-----------DVGING--------------------------------------------------
        Y KLM I+GDT AT      PS +  SDSE +N           D G N                                                   
Subjt:  YVKLMRIFGDTTATGVCTG-PSARFPSDSENEN-----------DVGING--------------------------------------------------

Query:  ----------------------IDILNAMDELDGETYAKVLKLLHGDVTWRKIFLRIPDARKRDLIYSL
                              I ILN+M ++D + Y KVLK L  D TWRK FL IP++R+R  + +L
Subjt:  ----------------------IDILNAMDELDGETYAKVLKLLHGDVTWRKIFLRIPDARKRDLIYSL

A0A1S4DUG7 L10-interacting MYB domain-containing protein-like isoform X26.3e-3537.55Show/hide
Query:  MDEEVAKGNHPTTTFTKTSWNYMRTKLNDSTGYAYTHDQLKN----------------NDMSGSGWDPLLGTITLEEEQWIDLFKVNKRAKKFRKSGCSD
        M++EVAKGN PTTTFTKTSW Y++ +L   TGYAY+H+QLKN                +D++G GWDP+LGTITL E QW +L KVNK AKKF+KSGC  
Subjt:  MDEEVAKGNHPTTTFTKTSWNYMRTKLNDSTGYAYTHDQLKN----------------NDMSGSGWDPLLGTITLEEEQWIDLFKVNKRAKKFRKSGCSD

Query:  YVKLMRIFGDTTATGVCTG-PSARFPSDSENEN-----------DVGING--------------------------------------------------
        Y KLM I+GDT AT      PS +  SDSE +N           D G N                                                   
Subjt:  YVKLMRIFGDTTATGVCTG-PSARFPSDSENEN-----------DVGING--------------------------------------------------

Query:  ----------------------IDILNAMDELDGETYAKVLKLLHGDVTWRKIFLRIPDARKRDLIYSL
                              I ILN+M ++D + Y KVLK L  D TWRK FL IP++R+R  + +L
Subjt:  ----------------------IDILNAMDELDGETYAKVLKLLHGDVTWRKIFLRIPDARKRDLIYSL

A0A5A7UIT7 L10-interacting MYB domain-containing protein-like9.7e-3645.77Show/hide
Query:  MSGSGWDPLLGTITLEEEQWIDLFKVNKRAKKFRKSGCSDYVKLMRIFGDTTATGVCTGPSARFPSDS--ENENDVGING--------------------
        M+G+GWDPLLGTI LEEEQW +LFKVNKRAKKFRKSGC  Y KL+RIFGDTTATGV   PS R  SDS  ENENDV  N                     
Subjt:  MSGSGWDPLLGTITLEEEQWIDLFKVNKRAKKFRKSGCSDYVKLMRIFGDTTATGVCTGPSARFPSDS--ENENDVGING--------------------

Query:  ------------------------------------------------------IDILNAMDELDGETYAKVLKLLHGDVTWRKIFLRIPDARKRDLIYS
                                                              +DILN M+++DGE Y+K+LKLLHGD+ WRK+FLR+PD+RKRD I S
Subjt:  ------------------------------------------------------IDILNAMDELDGETYAKVLKLLHGDVTWRKIFLRIPDARKRDLIYS

Query:  L
        L
Subjt:  L

A0A5D3BNQ5 L10-interacting MYB domain-containing protein-like1.7e-3545.32Show/hide
Query:  MSGSGWDPLLGTITLEEEQWIDLFKVNKRAKKFRKSGCSDYVKLMRIFGDTTATGVCTGPSARFPSDS--ENENDVGING--------------------
        M+G+GWDPLLGTI LEEEQW +LFKVNKRAKKFRKSGC  Y KL+RIFGDTTATGV   PS R  SDS  ENENDV  N                     
Subjt:  MSGSGWDPLLGTITLEEEQWIDLFKVNKRAKKFRKSGCSDYVKLMRIFGDTTATGVCTGPSARFPSDS--ENENDVGING--------------------

Query:  --------------------------------------------------------IDILNAMDELDGETYAKVLKLLHGDVTWRKIFLRIPDARKRDLI
                                                                +DILN M+++DGE Y+K+LKLLHGD+ WRK+FLR+PD+RKRD I
Subjt:  --------------------------------------------------------IDILNAMDELDGETYAKVLKLLHGDVTWRKIFLRIPDARKRDLI

Query:  YSL
         SL
Subjt:  YSL

A0A5D3C535 L10-interacting MYB domain-containing protein-like1.8e-3444.83Show/hide
Query:  MSGSGWDPLLGTITLEEEQWIDLFKVNKRAKKFRKSGCSDYVKLMRIFGDTTATGVCTGPSARFPSDS--ENENDVGING--------------------
        M+G+ WDPLLGTI LEEEQW +LFKVNKRAKKFRKSGC  Y KL+RIFGDTTATGV   PS R  SDS  ENENDV  N                     
Subjt:  MSGSGWDPLLGTITLEEEQWIDLFKVNKRAKKFRKSGCSDYVKLMRIFGDTTATGVCTGPSARFPSDS--ENENDVGING--------------------

Query:  --------------------------------------------------------IDILNAMDELDGETYAKVLKLLHGDVTWRKIFLRIPDARKRDLI
                                                                +DILN M+++DGE Y+K+LKLLHGD+ WRK+FLR+PD+RKRD I
Subjt:  --------------------------------------------------------IDILNAMDELDGETYAKVLKLLHGDVTWRKIFLRIPDARKRDLI

Query:  YSL
         SL
Subjt:  YSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGAAGAAGTTGCAAAGGGTAATCATCCAACCACAACATTTACAAAAACTAGTTGGAATTATATGAGAACCAAGTTAAACGATAGCACTGGTTATGCTTATACTCA
CGATCAACTGAAAAATAATGACATGTCAGGTAGTGGTTGGGATCCATTGTTAGGCACTATCACCCTAGAAGAGGAGCAATGGATTGATCTTTTTAAGGTGAATAAGAGAG
CTAAGAAGTTTAGAAAAAGTGGTTGTTCGGACTATGTAAAGCTTATGAGAATTTTTGGAGATACCACAGCTACAGGTGTATGTACTGGCCCATCGGCAAGATTTCCTTCA
GATTCTGAAAATGAAAATGATGTTGGGATTAATGGAATCGATATCTTGAATGCAATGGATGAGCTAGATGGAGAGACTTATGCCAAAGTACTCAAACTTTTGCATGGAGA
TGTTACTTGGAGAAAGATATTTTTGCGCATACCCGATGCAAGGAAGAGAGATTTGATTTATAGTCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACGAAGAAGTTGCAAAGGGTAATCATCCAACCACAACATTTACAAAAACTAGTTGGAATTATATGAGAACCAAGTTAAACGATAGCACTGGTTATGCTTATACTCA
CGATCAACTGAAAAATAATGACATGTCAGGTAGTGGTTGGGATCCATTGTTAGGCACTATCACCCTAGAAGAGGAGCAATGGATTGATCTTTTTAAGGTGAATAAGAGAG
CTAAGAAGTTTAGAAAAAGTGGTTGTTCGGACTATGTAAAGCTTATGAGAATTTTTGGAGATACCACAGCTACAGGTGTATGTACTGGCCCATCGGCAAGATTTCCTTCA
GATTCTGAAAATGAAAATGATGTTGGGATTAATGGAATCGATATCTTGAATGCAATGGATGAGCTAGATGGAGAGACTTATGCCAAAGTACTCAAACTTTTGCATGGAGA
TGTTACTTGGAGAAAGATATTTTTGCGCATACCCGATGCAAGGAAGAGAGATTTGATTTATAGTCTTTAG
Protein sequenceShow/hide protein sequence
MDEEVAKGNHPTTTFTKTSWNYMRTKLNDSTGYAYTHDQLKNNDMSGSGWDPLLGTITLEEEQWIDLFKVNKRAKKFRKSGCSDYVKLMRIFGDTTATGVCTGPSARFPS
DSENENDVGINGIDILNAMDELDGETYAKVLKLLHGDVTWRKIFLRIPDARKRDLIYSL