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Sed0016422 (gene) of Chayote v1 genome

Gene IDSed0016422
OrganismSechium edule (Chayote v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG05:9472295..9473638
RNA-Seq ExpressionSed0016422
SyntenySed0016422
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG48193.1 hypothetical protein EZV62_027487 [Acer yangbiense]4.2e-1733.81Show/hide
Query:  MNVDEFERLMENLELADNEITDVYELDDNDISTYDDQLEGIVACKMMSEKVISTDVFRKLIPRIWNAENKVTFEVLGNNVFLCSFESKIVKERVLERGPW
        M+  E  +L ENL L D +   V+E+ ++ I   D+ ++  +  K+++ K ++ + F+ LI +IWN   +V  E++G N F+  F +K  + +V  RGPW
Subjt:  MNVDEFERLMENLELADNEITDVYELDDNDISTYDDQLEGIVACKMMSEKVISTDVFRKLIPRIWNAENKVTFEVLGNNVFLCSFESKIVKERVLERGPW

Query:  IFYNALLVFEAMSGGKRVSELQFDKAAFWVRLHDVPPAC
        +F  +L+V E   G   +++L+F++A FWV++HD+P  C
Subjt:  IFYNALLVFEAMSGGKRVSELQFDKAAFWVRLHDVPPAC

TXG53376.1 hypothetical protein EZV62_022545 [Acer yangbiense]6.1e-1635.62Show/hide
Query:  MNVDEFERLMENLELADNEITDVYELDDNDISTYDDQLEGIVACKMMSEKVISTDVFRKLIPRIWNAENKVTFEVLGNNVFLCSFESKIVKERVLERGPW
        M+  E  RL ENL LA+ +   +   ++  I    D    +V  K++S K ++ + F+ LI +IW+   +V  E +G+N+F+  F +   + RVL+RGPW
Subjt:  MNVDEFERLMENLELADNEITDVYELDDNDISTYDDQLEGIVACKMMSEKVISTDVFRKLIPRIWNAENKVTFEVLGNNVFLCSFESKIVKERVLERGPW

Query:  IFYNALLVFEAMSGGKRVSELQFDKAAFWVRLHDVPPACHTEGCAR
         F N+L+V E  +G   VS+L F++A FWV++HD+P  C     A+
Subjt:  IFYNALLVFEAMSGGKRVSELQFDKAAFWVRLHDVPPACHTEGCAR

TXG63523.1 hypothetical protein EZV62_010517 [Acer yangbiense]4.6e-1630.82Show/hide
Query:  MNVDEFERLMENLELADNEITDVYELDDNDISTYDDQLEGIVACKMMSEKVISTDVFRKLIPRIWNAENKVTFEVLGNNVFLCSFESKIVKERVLERGPW
        M   E  RL ENL + D E ++++++ +       + +   +  K++S + ++ + F+ +I ++W+    V  EV+G N+F+  F + I ++R+  RGPW
Subjt:  MNVDEFERLMENLELADNEITDVYELDDNDISTYDDQLEGIVACKMMSEKVISTDVFRKLIPRIWNAENKVTFEVLGNNVFLCSFESKIVKERVLERGPW

Query:  IFYNALLVFEAMSGGKRVSELQFDKAAFWVRLHDVPPACHTEGCAR
         F  +L+V E   G   +S+L F +A FWV++HD+P  C     AR
Subjt:  IFYNALLVFEAMSGGKRVSELQFDKAAFWVRLHDVPPACHTEGCAR

TXG72599.1 hypothetical protein EZV62_001178 [Acer yangbiense]6.1e-1632.88Show/hide
Query:  MNVDEFERLMENLELADNEITDVYELDDNDISTYDDQLEGIVACKMMSEKVISTDVFRKLIPRIWNAENKVTFEVLGNNVFLCSFESKIVKERVLERGPW
        M+  E E+L +++ LAD E   V E+ +  +    + ++  +  K+++ K I+ + F+ LI +IW+   +V  E++G+NVF+  F ++  ++RV  RGPW
Subjt:  MNVDEFERLMENLELADNEITDVYELDDNDISTYDDQLEGIVACKMMSEKVISTDVFRKLIPRIWNAENKVTFEVLGNNVFLCSFESKIVKERVLERGPW

Query:  IFYNALLVFEAMSGGKRVSELQFDKAAFWVRLHDVPPACHTEGCAR
         F N+L+  E  SG   V+ ++F++A FW+++HD+P  C     AR
Subjt:  IFYNALLVFEAMSGGKRVSELQFDKAAFWVRLHDVPPACHTEGCAR

TXG73888.1 hypothetical protein EZV62_002467 [Acer yangbiense]7.9e-1630.82Show/hide
Query:  MNVDEFERLMENLELADNEITDVYELDDNDISTYDDQLEGIVACKMMSEKVISTDVFRKLIPRIWNAENKVTFEVLGNNVFLCSFESKIVKERVLERGPW
        M   E  RL ENL + D E ++++++ +       + ++  +  K++S K ++ + F+ +I ++W+    V  EV+G N+F+  F +  V+ ++  RGPW
Subjt:  MNVDEFERLMENLELADNEITDVYELDDNDISTYDDQLEGIVACKMMSEKVISTDVFRKLIPRIWNAENKVTFEVLGNNVFLCSFESKIVKERVLERGPW

Query:  IFYNALLVFEAMSGGKRVSELQFDKAAFWVRLHDVPPACHTEGCAR
         F  +L+V   + G   +S+L+FDKA FWV++HD+P  C  +  A+
Subjt:  IFYNALLVFEAMSGGKRVSELQFDKAAFWVRLHDVPPACHTEGCAR

TrEMBL top hitse value%identityAlignment
A0A5C7GU64 CCHC-type domain-containing protein2.0e-1733.81Show/hide
Query:  MNVDEFERLMENLELADNEITDVYELDDNDISTYDDQLEGIVACKMMSEKVISTDVFRKLIPRIWNAENKVTFEVLGNNVFLCSFESKIVKERVLERGPW
        M+  E  +L ENL L D +   V+E+ ++ I   D+ ++  +  K+++ K ++ + F+ LI +IWN   +V  E++G N F+  F +K  + +V  RGPW
Subjt:  MNVDEFERLMENLELADNEITDVYELDDNDISTYDDQLEGIVACKMMSEKVISTDVFRKLIPRIWNAENKVTFEVLGNNVFLCSFESKIVKERVLERGPW

Query:  IFYNALLVFEAMSGGKRVSELQFDKAAFWVRLHDVPPAC
        +F  +L+V E   G   +++L+F++A FWV++HD+P  C
Subjt:  IFYNALLVFEAMSGGKRVSELQFDKAAFWVRLHDVPPAC

A0A5C7HB59 Uncharacterized protein2.9e-1635.62Show/hide
Query:  MNVDEFERLMENLELADNEITDVYELDDNDISTYDDQLEGIVACKMMSEKVISTDVFRKLIPRIWNAENKVTFEVLGNNVFLCSFESKIVKERVLERGPW
        M+  E  RL ENL LA+ +   +   ++  I    D    +V  K++S K ++ + F+ LI +IW+   +V  E +G+N+F+  F +   + RVL+RGPW
Subjt:  MNVDEFERLMENLELADNEITDVYELDDNDISTYDDQLEGIVACKMMSEKVISTDVFRKLIPRIWNAENKVTFEVLGNNVFLCSFESKIVKERVLERGPW

Query:  IFYNALLVFEAMSGGKRVSELQFDKAAFWVRLHDVPPACHTEGCAR
         F N+L+V E  +G   VS+L F++A FWV++HD+P  C     A+
Subjt:  IFYNALLVFEAMSGGKRVSELQFDKAAFWVRLHDVPPACHTEGCAR

A0A5C7I1Z5 Uncharacterized protein2.2e-1630.82Show/hide
Query:  MNVDEFERLMENLELADNEITDVYELDDNDISTYDDQLEGIVACKMMSEKVISTDVFRKLIPRIWNAENKVTFEVLGNNVFLCSFESKIVKERVLERGPW
        M   E  RL ENL + D E ++++++ +       + +   +  K++S + ++ + F+ +I ++W+    V  EV+G N+F+  F + I ++R+  RGPW
Subjt:  MNVDEFERLMENLELADNEITDVYELDDNDISTYDDQLEGIVACKMMSEKVISTDVFRKLIPRIWNAENKVTFEVLGNNVFLCSFESKIVKERVLERGPW

Query:  IFYNALLVFEAMSGGKRVSELQFDKAAFWVRLHDVPPACHTEGCAR
         F  +L+V E   G   +S+L F +A FWV++HD+P  C     AR
Subjt:  IFYNALLVFEAMSGGKRVSELQFDKAAFWVRLHDVPPACHTEGCAR

A0A5C7IU01 CCHC-type domain-containing protein2.9e-1632.88Show/hide
Query:  MNVDEFERLMENLELADNEITDVYELDDNDISTYDDQLEGIVACKMMSEKVISTDVFRKLIPRIWNAENKVTFEVLGNNVFLCSFESKIVKERVLERGPW
        M+  E E+L +++ LAD E   V E+ +  +    + ++  +  K+++ K I+ + F+ LI +IW+   +V  E++G+NVF+  F ++  ++RV  RGPW
Subjt:  MNVDEFERLMENLELADNEITDVYELDDNDISTYDDQLEGIVACKMMSEKVISTDVFRKLIPRIWNAENKVTFEVLGNNVFLCSFESKIVKERVLERGPW

Query:  IFYNALLVFEAMSGGKRVSELQFDKAAFWVRLHDVPPACHTEGCAR
         F N+L+  E  SG   V+ ++F++A FW+++HD+P  C     AR
Subjt:  IFYNALLVFEAMSGGKRVSELQFDKAAFWVRLHDVPPACHTEGCAR

A0A5C7IXM0 CCHC-type domain-containing protein3.8e-1630.82Show/hide
Query:  MNVDEFERLMENLELADNEITDVYELDDNDISTYDDQLEGIVACKMMSEKVISTDVFRKLIPRIWNAENKVTFEVLGNNVFLCSFESKIVKERVLERGPW
        M   E  RL ENL + D E ++++++ +       + ++  +  K++S K ++ + F+ +I ++W+    V  EV+G N+F+  F +  V+ ++  RGPW
Subjt:  MNVDEFERLMENLELADNEITDVYELDDNDISTYDDQLEGIVACKMMSEKVISTDVFRKLIPRIWNAENKVTFEVLGNNVFLCSFESKIVKERVLERGPW

Query:  IFYNALLVFEAMSGGKRVSELQFDKAAFWVRLHDVPPACHTEGCAR
         F  +L+V   + G   +S+L+FDKA FWV++HD+P  C  +  A+
Subjt:  IFYNALLVFEAMSGGKRVSELQFDKAAFWVRLHDVPPACHTEGCAR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGTGGATGAGTTCGAGAGGCTTATGGAAAATCTGGAGTTGGCTGACAATGAAATAACAGATGTTTATGAGCTCGATGACAACGATATTTCAACCTATGATGATCA
ACTTGAGGGTATTGTGGCCTGTAAAATGATGTCTGAGAAGGTGATTAGTACAGATGTTTTCAGAAAACTTATTCCCAGAATCTGGAATGCAGAGAATAAGGTAACTTTTG
AGGTTTTGGGTAATAATGTTTTCCTCTGTTCTTTTGAGTCTAAGATTGTGAAAGAGAGGGTGTTGGAACGTGGTCCTTGGATTTTTTATAATGCCCTTCTGGTCTTTGAG
GCCATGAGTGGAGGAAAAAGAGTTTCTGAACTTCAATTTGATAAAGCTGCCTTTTGGGTTCGGTTGCACGACGTTCCGCCAGCGTGTCATACAGAGGGTTGTGCGAGAGG
GCATCTAGTTGAAGGGTGTTCGTTTGTTGTTGCTCAAGAAGGGGTAGCTCTTCTGTTTGGGGAAGAATTGAGAGAGCCTAATTCTTTTTTCAGAGGAGAAGGGCGTGCTT
TTAATAGGCAAGGAGGTAAGGGGTGGGAACGTGTGTTTAATGGGCTCATGAATAATATAGGGGAAGGAGCCATTCAAGGTAAAGGGTCTTCTTCCGCCGGCTTTCGACAA
GGAGATGAAGAGGAGTTTCGAGTTCAGCAGGGAAGAGGAGATGACCGGAACTGCAGCCGACATCTGAGCAACAGGTCGCCGGAAGGAGGAGAGAGGGCGAGAGCTGGAGC
AGCGCAGTCTAGTCAACCTCAACAAAAAGGGATGGCGACATTAGGGGATTACTGCAGAGTTAGGGAGGTTAGGGCTTCAGATCGTACATCAGATGGTAGCTGGAAAGGGG
AAGACGTTTCTGCAGGCGTGTTTCTTGGGCAGGATGCTCAAGGTGGGCCAGATAGTGTTGTCGGGCTGAGTGTGAAAGGAGTATGTTTGAATGGGCTAAATTCAGAAGTG
GGCCTTAGAGAGTTTAATTTGGAGCAGAATATAAAGGGTGTTGGTTTGGGCTTAAATGAAAAGGTGGCTGAGATTAGAGAAGGGTTCATTGGGCCTTGTGAATCAAAAGC
CATTTCTGAGCTTAAGTGTTGTCTTAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAATGTGGATGAGTTCGAGAGGCTTATGGAAAATCTGGAGTTGGCTGACAATGAAATAACAGATGTTTATGAGCTCGATGACAACGATATTTCAACCTATGATGATCA
ACTTGAGGGTATTGTGGCCTGTAAAATGATGTCTGAGAAGGTGATTAGTACAGATGTTTTCAGAAAACTTATTCCCAGAATCTGGAATGCAGAGAATAAGGTAACTTTTG
AGGTTTTGGGTAATAATGTTTTCCTCTGTTCTTTTGAGTCTAAGATTGTGAAAGAGAGGGTGTTGGAACGTGGTCCTTGGATTTTTTATAATGCCCTTCTGGTCTTTGAG
GCCATGAGTGGAGGAAAAAGAGTTTCTGAACTTCAATTTGATAAAGCTGCCTTTTGGGTTCGGTTGCACGACGTTCCGCCAGCGTGTCATACAGAGGGTTGTGCGAGAGG
GCATCTAGTTGAAGGGTGTTCGTTTGTTGTTGCTCAAGAAGGGGTAGCTCTTCTGTTTGGGGAAGAATTGAGAGAGCCTAATTCTTTTTTCAGAGGAGAAGGGCGTGCTT
TTAATAGGCAAGGAGGTAAGGGGTGGGAACGTGTGTTTAATGGGCTCATGAATAATATAGGGGAAGGAGCCATTCAAGGTAAAGGGTCTTCTTCCGCCGGCTTTCGACAA
GGAGATGAAGAGGAGTTTCGAGTTCAGCAGGGAAGAGGAGATGACCGGAACTGCAGCCGACATCTGAGCAACAGGTCGCCGGAAGGAGGAGAGAGGGCGAGAGCTGGAGC
AGCGCAGTCTAGTCAACCTCAACAAAAAGGGATGGCGACATTAGGGGATTACTGCAGAGTTAGGGAGGTTAGGGCTTCAGATCGTACATCAGATGGTAGCTGGAAAGGGG
AAGACGTTTCTGCAGGCGTGTTTCTTGGGCAGGATGCTCAAGGTGGGCCAGATAGTGTTGTCGGGCTGAGTGTGAAAGGAGTATGTTTGAATGGGCTAAATTCAGAAGTG
GGCCTTAGAGAGTTTAATTTGGAGCAGAATATAAAGGGTGTTGGTTTGGGCTTAAATGAAAAGGTGGCTGAGATTAGAGAAGGGTTCATTGGGCCTTGTGAATCAAAAGC
CATTTCTGAGCTTAAGTGTTGTCTTAAATAA
Protein sequenceShow/hide protein sequence
MNVDEFERLMENLELADNEITDVYELDDNDISTYDDQLEGIVACKMMSEKVISTDVFRKLIPRIWNAENKVTFEVLGNNVFLCSFESKIVKERVLERGPWIFYNALLVFE
AMSGGKRVSELQFDKAAFWVRLHDVPPACHTEGCARGHLVEGCSFVVAQEGVALLFGEELREPNSFFRGEGRAFNRQGGKGWERVFNGLMNNIGEGAIQGKGSSSAGFRQ
GDEEEFRVQQGRGDDRNCSRHLSNRSPEGGERARAGAAQSSQPQQKGMATLGDYCRVREVRASDRTSDGSWKGEDVSAGVFLGQDAQGGPDSVVGLSVKGVCLNGLNSEV
GLREFNLEQNIKGVGLGLNEKVAEIREGFIGPCESKAISELKCCLK