; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0016424 (gene) of Chayote v1 genome

Gene IDSed0016424
OrganismSechium edule (Chayote v1)
DescriptionPlant self-incompatibility protein S1 family
Genome locationLG04:34776202..34796329
RNA-Seq ExpressionSed0016424
SyntenySed0016424
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN61530.1 hypothetical protein Csa_006387 [Cucumis sativus]2.2e-4156.49Show/hide
Query:  MSSFSTFTLFMLMSLFFARQTIVKGDIFSSPPISVNITNVLEN-HGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFC
        MSSFSTF L + +SL FA    ++G  F SPP++VNITN L++ + +LT+HCKSGDDDLG+HQL  L SYAFN              FRPNF+G+TLF+C
Subjt:  MSSFSTFTLFMLMSLFFARQTIVKGDIFSSPPISVNITNVLEN-HGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFC

Query:  SFEWNGSSHYFDIYKDKRDQLHCYG-LCLWIVGEKGLCKFNYITKKYDVCYGWT
        +F+W GSSHYF+IY+D RD+  C   LCLWIVGE+GLC F+Y T  YD+CY W+
Subjt:  SFEWNGSSHYFDIYKDKRDQLHCYG-LCLWIVGEKGLCKFNYITKKYDVCYGWT

XP_008460739.1 PREDICTED: uncharacterized protein LOC103499501 [Cucumis melo]1.4e-3257.02Show/hide
Query:  ISVNITNVLEN-HGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCSFEWNGSSHYFDIYKDKRDQLHC-YGLCLWIV
        ++VNITN +   + +LTVHCKSGDDDLG+H+LP L+S              Y FTFRPNF+G+TLF+C F+W+   HYFDIYKD RD L C   LCLWI+
Subjt:  ISVNITNVLEN-HGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCSFEWNGSSHYFDIYKDKRDQLHC-YGLCLWIV

Query:  GEKGLCKFNYITKKYDVCYGW
         EKG+C FNY TK YD CY W
Subjt:  GEKGLCKFNYITKKYDVCYGW

XP_008465559.1 PREDICTED: pumilio homolog 15-like, partial [Cucumis melo]1.5e-3759.69Show/hide
Query:  VKGDIFSSPPISVNITNVLENHGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCSFEWNGSSHYFDIYKDKRDQLHC
        ++G  F +P ++VNITN L +  +LTVHCKSGDDDLGIHQL  L                YAFTFRPNF GTTLF+C+F+W G SH FDIYKD RD+  C
Subjt:  VKGDIFSSPPISVNITNVLENHGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCSFEWNGSSHYFDIYKDKRDQLHC

Query:  YGLCLWIVGEKGLCKFNYITKKYDVCYGW
         GLCLWIVGE+G+C F+Y+TKKYD CY W
Subjt:  YGLCLWIVGEKGLCKFNYITKKYDVCYGW

XP_022138779.1 S-protein homolog 5 [Momordica charantia]1.9e-3252.98Show/hide
Query:  MSSFSTFTLFMLMSLFFARQTIVKGDIFSSPPISVNITNVLENHGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCS
        M++  + +L + +S      TI       S   SVNITN+LE+H +LTVHCKS DDDLG HQLP LISYAF+              FRPN + +TLFFCS
Subjt:  MSSFSTFTLFMLMSLFFARQTIVKGDIFSSPPISVNITNVLENHGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCS

Query:  FEWNGSSHYFDIYKDKRDQLHCYGLCLWIVGEKGLCKFNYITKKYDVCYGW
        F+W GS HYF+IY  KRD+  C  LCLWIVGEKGLC +N  T KYD+CY W
Subjt:  FEWNGSSHYFDIYKDKRDQLHCYGLCLWIVGEKGLCKFNYITKKYDVCYGW

XP_022933325.1 S-protein homolog 5-like, partial [Cucurbita moschata]2.4e-3260.16Show/hide
Query:  MSLFFARQ-TIVKGDIFSSPPISVNITNVLENHGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCSFEWNGSSHYFD
        MSLFF    T + G IF  PPI+VNITNVL++H +LT+HCKSGDDDLGIHQLPFL                YAFTFRPNF+G+T F+C+F+W+G S YFD
Subjt:  MSLFFARQ-TIVKGDIFSSPPISVNITNVLENHGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCSFEWNGSSHYFD

Query:  IYKDKRDQLHC-YGLCLWIVGEK
        IYKD RD++ C   LCLWIVGE+
Subjt:  IYKDKRDQLHC-YGLCLWIVGEK

TrEMBL top hitse value%identityAlignment
A0A0A0LI28 S-protein homolog1.1e-4156.49Show/hide
Query:  MSSFSTFTLFMLMSLFFARQTIVKGDIFSSPPISVNITNVLEN-HGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFC
        MSSFSTF L + +SL FA    ++G  F SPP++VNITN L++ + +LT+HCKSGDDDLG+HQL  L SYAFN              FRPNF+G+TLF+C
Subjt:  MSSFSTFTLFMLMSLFFARQTIVKGDIFSSPPISVNITNVLEN-HGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFC

Query:  SFEWNGSSHYFDIYKDKRDQLHCYG-LCLWIVGEKGLCKFNYITKKYDVCYGWT
        +F+W GSSHYF+IY+D RD+  C   LCLWIVGE+GLC F+Y T  YD+CY W+
Subjt:  SFEWNGSSHYFDIYKDKRDQLHCYG-LCLWIVGEKGLCKFNYITKKYDVCYGWT

A0A1S3CDK4 S-protein homolog6.9e-3357.02Show/hide
Query:  ISVNITNVLEN-HGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCSFEWNGSSHYFDIYKDKRDQLHC-YGLCLWIV
        ++VNITN +   + +LTVHCKSGDDDLG+H+LP L+S              Y FTFRPNF+G+TLF+C F+W+   HYFDIYKD RD L C   LCLWI+
Subjt:  ISVNITNVLEN-HGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCSFEWNGSSHYFDIYKDKRDQLHC-YGLCLWIV

Query:  GEKGLCKFNYITKKYDVCYGW
         EKG+C FNY TK YD CY W
Subjt:  GEKGLCKFNYITKKYDVCYGW

A0A1S3CP53 S-protein homolog7.1e-3859.69Show/hide
Query:  VKGDIFSSPPISVNITNVLENHGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCSFEWNGSSHYFDIYKDKRDQLHC
        ++G  F +P ++VNITN L +  +LTVHCKSGDDDLGIHQL  L                YAFTFRPNF GTTLF+C+F+W G SH FDIYKD RD+  C
Subjt:  VKGDIFSSPPISVNITNVLENHGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCSFEWNGSSHYFDIYKDKRDQLHC

Query:  YGLCLWIVGEKGLCKFNYITKKYDVCYGW
         GLCLWIVGE+G+C F+Y+TKKYD CY W
Subjt:  YGLCLWIVGEKGLCKFNYITKKYDVCYGW

A0A6J1CB24 S-protein homolog9.0e-3352.98Show/hide
Query:  MSSFSTFTLFMLMSLFFARQTIVKGDIFSSPPISVNITNVLENHGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCS
        M++  + +L + +S      TI       S   SVNITN+LE+H +LTVHCKS DDDLG HQLP LISYAF+              FRPN + +TLFFCS
Subjt:  MSSFSTFTLFMLMSLFFARQTIVKGDIFSSPPISVNITNVLENHGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCS

Query:  FEWNGSSHYFDIYKDKRDQLHCYGLCLWIVGEKGLCKFNYITKKYDVCYGW
        F+W GS HYF+IY  KRD+  C  LCLWIVGEKGLC +N  T KYD+CY W
Subjt:  FEWNGSSHYFDIYKDKRDQLHCYGLCLWIVGEKGLCKFNYITKKYDVCYGW

A0A6J1F4K2 S-protein homolog1.2e-3260.16Show/hide
Query:  MSLFFARQ-TIVKGDIFSSPPISVNITNVLENHGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCSFEWNGSSHYFD
        MSLFF    T + G IF  PPI+VNITNVL++H +LT+HCKSGDDDLGIHQLPFL                YAFTFRPNF+G+T F+C+F+W+G S YFD
Subjt:  MSLFFARQ-TIVKGDIFSSPPISVNITNVLENHGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCSFEWNGSSHYFD

Query:  IYKDKRDQLHC-YGLCLWIVGEK
        IYKD RD++ C   LCLWIVGE+
Subjt:  IYKDKRDQLHC-YGLCLWIVGEK

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 23.5e-1841.09Show/hide
Query:  IFSSPPISVNITNVLENHGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCSFEWNGSSHYFDIYKDKRD---QLHCY
        +F +   +V I N L N   L  HCKS DDDLG   L          +P       ++F+F   FFG TL+FCSF W   SH FDIYKD RD      C 
Subjt:  IFSSPPISVNITNVLENHGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCSFEWNGSSHYFDIYKDKRD---QLHCY

Query:  G-LCLWIVGEKGLCKFNYITKKYDVCYGW
           C+W +   G C+FN  TK++D+CY W
Subjt:  G-LCLWIVGEKGLCKFNYITKKYDVCYGW

F4JZG1 S-protein homolog 46.7e-1734.69Show/hide
Query:  LFMLMSLFFARQTIVKGDIFSSPPISVNITNVLENHGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCSFEWNGSSH
        +++L+ + F++        +S+    V ITN L +   L +HCKS DDDLG+  L    S++F FRP+                G TLFFC F W G S 
Subjt:  LFMLMSLFFARQTIVKGDIFSSPPISVNITNVLENHGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCSFEWNGSSH

Query:  YFDIYKDKRDQLH----CYGLCLWIVGEKGLCKFNYITKKYDVCYGW
        +F+IY D RD +     C   C+W +G+ G C+F+ I   +++CY W
Subjt:  YFDIYKDKRDQLH----CYGLCLWIVGEKGLCKFNYITKKYDVCYGW

O23020 S-protein homolog 51.5e-1338.46Show/hide
Query:  VNITNVLENHGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCSFEWNGSSHYFDIYKDKRDQLHCYGLCLWIVGEKG
        V +TN++     LT+HCKS  DDLGIH +PF   Y F               F+PN + +TLFFCSF+W+     FDIY  +RDQ  C   C W +   G
Subjt:  VNITNVLENHGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCSFEWNGSSHYFDIYKDKRDQLHCYGLCLWIVGEKG

Query:  LCKFNYITKKYDVCYGW
         C+     K    C+ W
Subjt:  LCKFNYITKKYDVCYGW

P0DN93 S-protein homolog 291.1e-1640.17Show/hide
Query:  VNITNVLENHGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCSFEWNGSSHYFDIYKDKRDQLHCYGLCLWIVGEKG
        V +TN +     LT+ C+S DDDLG H L  L   AF ++            FRP++F TTLF C F WN +  +FD Y+  RDQ HCY  C W +    
Subjt:  VNITNVLENHGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCSFEWNGSSHYFDIYKDKRDQLHCYGLCLWIVGEKG

Query:  LCKFNYITKKYDVCYGW
         C      KK+D CY W
Subjt:  LCKFNYITKKYDVCYGW

Q9FMQ4 S-protein homolog 33.7e-1535.37Show/hide
Query:  LFMLMSLFFARQTIVKGDIFSSPPISVNITNVLENHGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCSFEWNGSSH
        +++L+ + F+ Q     D+  S    V ITN L +   L +HCKS DDDLG+  L           PN      ++F FR +  GTTLF+C F W G S 
Subjt:  LFMLMSLFFARQTIVKGDIFSSPPISVNITNVLENHGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCSFEWNGSSH

Query:  YFDIYKDKRD----QLHCYGLCLWIVGEKGLCKFNYITKKYDVCYGW
         FDIY D RD     + C   C+W +  +G C F+     +++CY W
Subjt:  YFDIYKDKRD----QLHCYGLCLWIVGEKGLCKFNYITKKYDVCYGW

Arabidopsis top hitse value%identityAlignment
AT3G16970.1 Plant self-incompatibility protein S1 family2.4e-1740.94Show/hide
Query:  FSSPPISVNITNVLENHGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCSFEWNGSSHYFDIYKDKRDQLHC-YGL-
        F +P  +V I N L  H  L  HCKS +DDLG   +      A N      GT  ++F FRP+ FG TLFFC F W+   H+FDIYK  RD+    +G  
Subjt:  FSSPPISVNITNVLENHGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCSFEWNGSSHYFDIYKDKRDQLHC-YGL-

Query:  -CLWIVGEKGLCKFNYITKKYDVCYGW
         C W + + G CK N  +  +DVC  W
Subjt:  -CLWIVGEKGLCKFNYITKKYDVCYGW

AT3G17080.1 Plant self-incompatibility protein S1 family1.2e-1637.01Show/hide
Query:  MSSFSTFTLFMLMSLFFARQTIVKGDIFSSPPISVNITNVLENHGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCS
        M S  T  LF +M +F +        I S    SV I N L     L  HCKS +DDLG   L    S++F               F P+ FG TLF+C 
Subjt:  MSSFSTFTLFMLMSLFFARQTIVKGDIFSSPPISVNITNVLENHGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCS

Query:  FEWNGSSHYFDIYKDKRD-QLHCYGL--CLWIVGEKGLCKFNYITKKYDVCYGW
        F W   SH FDIYK  RD +   +G   C W + + G CKF   T  +D CY W
Subjt:  FEWNGSSHYFDIYKDKRD-QLHCYGL--CLWIVGEKGLCKFNYITKKYDVCYGW

AT4G16195.1 Plant self-incompatibility protein S1 family2.5e-1941.09Show/hide
Query:  IFSSPPISVNITNVLENHGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCSFEWNGSSHYFDIYKDKRD---QLHCY
        +F +   +V I N L N   L  HCKS DDDLG   L          +P       ++F+F   FFG TL+FCSF W   SH FDIYKD RD      C 
Subjt:  IFSSPPISVNITNVLENHGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCSFEWNGSSHYFDIYKDKRD---QLHCY

Query:  G-LCLWIVGEKGLCKFNYITKKYDVCYGW
           C+W +   G C+FN  TK++D+CY W
Subjt:  G-LCLWIVGEKGLCKFNYITKKYDVCYGW

AT5G12060.1 Plant self-incompatibility protein S1 family2.6e-1635.37Show/hide
Query:  LFMLMSLFFARQTIVKGDIFSSPPISVNITNVLENHGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCSFEWNGSSH
        +++L+ + F+ Q     D+  S    V ITN L +   L +HCKS DDDLG+  L           PN      ++F FR +  GTTLF+C F W G S 
Subjt:  LFMLMSLFFARQTIVKGDIFSSPPISVNITNVLENHGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCSFEWNGSSH

Query:  YFDIYKDKRD----QLHCYGLCLWIVGEKGLCKFNYITKKYDVCYGW
         FDIY D RD     + C   C+W +  +G C F+     +++CY W
Subjt:  YFDIYKDKRD----QLHCYGLCLWIVGEKGLCKFNYITKKYDVCYGW

AT5G12070.1 Plant self-incompatibility protein S1 family4.8e-1834.69Show/hide
Query:  LFMLMSLFFARQTIVKGDIFSSPPISVNITNVLENHGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCSFEWNGSSH
        +++L+ + F++        +S+    V ITN L +   L +HCKS DDDLG+  L    S++F FRP+                G TLFFC F W G S 
Subjt:  LFMLMSLFFARQTIVKGDIFSSPPISVNITNVLENHGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCSFEWNGSSH

Query:  YFDIYKDKRDQLH----CYGLCLWIVGEKGLCKFNYITKKYDVCYGW
        +F+IY D RD +     C   C+W +G+ G C+F+ I   +++CY W
Subjt:  YFDIYKDKRDQLH----CYGLCLWIVGEKGLCKFNYITKKYDVCYGW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCATTCTCAACATTTACGCTATTTATGCTAATGTCATTATTTTTTGCCCGCCAAACCATCGTCAAAGGAGACATCTTCTCTTCTCCACCGATTTCAGTGAACAT
AACAAATGTTCTCGAAAATCATGGTAAGCTCACTGTCCATTGCAAATCGGGCGATGACGATTTGGGGATTCACCAATTGCCATTTCTGATTAGCTACGCTTTCAATTTTC
GACCGAACTTCTTTGGTACAACATTCTACGCCTTCACTTTTCGACCCAACTTCTTTGGTACAACATTATTCTTTTGCAGCTTTGAGTGGAATGGCTCATCTCATTACTTT
GATATCTACAAGGACAAAAGGGATCAATTGCATTGCTATGGTTTATGTTTGTGGATTGTAGGTGAAAAGGGTCTATGTAAGTTCAATTATATCACCAAAAAATATGATGT
TTGTTATGGTTGGACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCATTCTCAACATTTACGCTATTTATGCTAATGTCATTATTTTTTGCCCGCCAAACCATCGTCAAAGGAGACATCTTCTCTTCTCCACCGATTTCAGTGAACAT
AACAAATGTTCTCGAAAATCATGGTAAGCTCACTGTCCATTGCAAATCGGGCGATGACGATTTGGGGATTCACCAATTGCCATTTCTGATTAGCTACGCTTTCAATTTTC
GACCGAACTTCTTTGGTACAACATTCTACGCCTTCACTTTTCGACCCAACTTCTTTGGTACAACATTATTCTTTTGCAGCTTTGAGTGGAATGGCTCATCTCATTACTTT
GATATCTACAAGGACAAAAGGGATCAATTGCATTGCTATGGTTTATGTTTGTGGATTGTAGGTGAAAAGGGTCTATGTAAGTTCAATTATATCACCAAAAAATATGATGT
TTGTTATGGTTGGACCTAA
Protein sequenceShow/hide protein sequence
MSSFSTFTLFMLMSLFFARQTIVKGDIFSSPPISVNITNVLENHGKLTVHCKSGDDDLGIHQLPFLISYAFNFRPNFFGTTFYAFTFRPNFFGTTLFFCSFEWNGSSHYF
DIYKDKRDQLHCYGLCLWIVGEKGLCKFNYITKKYDVCYGWT