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Sed0016427 (gene) of Chayote v1 genome

Gene IDSed0016427
OrganismSechium edule (Chayote v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationLG01:15351328..15351678
RNA-Seq ExpressionSed0016427
SyntenySed0016427
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site
IPR044205 - Calcium-binding protein KIC/PBP1/KRP1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056934.1 calcium-binding protein PBP1 [Cucumis melo var. makuwa]8.6e-3069.16Show/hide
Query:  SRTGVALFVDLFPGMVIKLGVAGFMKELRSGFRLLMDKEKGVITAESLRKKMGFLG--LDEEEAMEMVKEGDLDGDGALSEAEFCILMFRLSPGLLQLSK
        S  GV +F D FP M+ KLGV GF+KELR GF LLMDKEKGVITAESLRK M F G  L++EE M MV+EGDLDGDGALSEAEF ILM +LSPG + LS 
Subjt:  SRTGVALFVDLFPGMVIKLGVAGFMKELRSGFRLLMDKEKGVITAESLRKKMGFLG--LDEEEAMEMVKEGDLDGDGALSEAEFCILMFRLSPGLLQLSK

Query:  ALFHQSN
        + FHQS+
Subjt:  ALFHQSN

KAE8652697.1 hypothetical protein Csa_014317 [Cucumis sativus]8.6e-3072.12Show/hide
Query:  VALFVDLFPGMVIKLGVAGFMKELRSGFRLLMDKEKGVITAESLRKKMGFLG--LDEEEAMEMVKEGDLDGDGALSEAEFCILMFRLSPGLLQLSKALFH
        V LF D FP M+ KLG  GF+KELR GFRLLMDKEKGVITAESLRK M F G  L++EE M MVKEGDLDGDGALSEAEF ILM +LSPG + LS + FH
Subjt:  VALFVDLFPGMVIKLGVAGFMKELRSGFRLLMDKEKGVITAESLRKKMGFLG--LDEEEAMEMVKEGDLDGDGALSEAEFCILMFRLSPGLLQLSKALFH

Query:  QSNS
        QS+S
Subjt:  QSNS

KAG6573227.1 Calcium-binding protein KIC, partial [Cucurbita argyrosperma subsp. sororia]2.3e-3882.86Show/hide
Query:  MGSRTGVALFVDLFPGMVIKLGVAGFMKELRSGFRLLMDKEKGVITAESLRKKMGFLGLDEEEAMEMVKEGDLDGDGALSEAEFCILMFRLSPGLLQLSK
        MGSR GV LF D FP MV KLGV GFM+ELR GFRLLMDKEKGVITAESLR KMGFLGLDEEEAM MV+EGDLDGDGALSEAEFC+LMF+LSPGL+QLS 
Subjt:  MGSRTGVALFVDLFPGMVIKLGVAGFMKELRSGFRLLMDKEKGVITAESLRKKMGFLGLDEEEAMEMVKEGDLDGDGALSEAEFCILMFRLSPGLLQLSK

Query:  ALFHQ
         LF Q
Subjt:  ALFHQ

KAG7012400.1 Calcium-binding protein KIC, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-3781.9Show/hide
Query:  MGSRTGVALFVDLFPGMVIKLGVAGFMKELRSGFRLLMDKEKGVITAESLRKKMGFLGLDEEEAMEMVKEGDLDGDGALSEAEFCILMFRLSPGLLQLSK
        MGSR GV LF D FP MV KLGV GFM+ELR GFRLLMDKEKGVITAESLR KM FLGLDEEEAM MV+EGDLDGDGALSEAEFC+LMF+LSPGL+QLS 
Subjt:  MGSRTGVALFVDLFPGMVIKLGVAGFMKELRSGFRLLMDKEKGVITAESLRKKMGFLGLDEEEAMEMVKEGDLDGDGALSEAEFCILMFRLSPGLLQLSK

Query:  ALFHQ
         LF Q
Subjt:  ALFHQ

XP_038895967.1 calcium-binding protein PBP1-like [Benincasa hispida]6.6e-3069.72Show/hide
Query:  MGSRTGVALFVDLFPGMVIKLGVAGFMKELRSGFRLLMDKEKGVITAESLRKKMGFLG--LDEEEAMEMVKEGDLDGDGALSEAEFCILMFRLSPGLLQL
        MGS  GV  F D FP MV KLG+ GFMKELRSGF L+MDKEKG+IT ESLRK MGFLG  L++EE M MV+EGDLDGDGAL+EAEFCILM RLSP     
Subjt:  MGSRTGVALFVDLFPGMVIKLGVAGFMKELRSGFRLLMDKEKGVITAESLRKKMGFLG--LDEEEAMEMVKEGDLDGDGALSEAEFCILMFRLSPGLLQL

Query:  SKALFHQSN
           LFHQS+
Subjt:  SKALFHQSN

TrEMBL top hitse value%identityAlignment
A0A0A0LV00 EF-hand domain-containing protein4.2e-3072.12Show/hide
Query:  VALFVDLFPGMVIKLGVAGFMKELRSGFRLLMDKEKGVITAESLRKKMGFLG--LDEEEAMEMVKEGDLDGDGALSEAEFCILMFRLSPGLLQLSKALFH
        V LF D FP M+ KLG  GF+KELR GFRLLMDKEKGVITAESLRK M F G  L++EE M MVKEGDLDGDGALSEAEF ILM +LSPG + LS + FH
Subjt:  VALFVDLFPGMVIKLGVAGFMKELRSGFRLLMDKEKGVITAESLRKKMGFLG--LDEEEAMEMVKEGDLDGDGALSEAEFCILMFRLSPGLLQLSKALFH

Query:  QSNS
        QS+S
Subjt:  QSNS

A0A5A7UNY8 Calcium-binding protein PBP14.2e-3069.16Show/hide
Query:  SRTGVALFVDLFPGMVIKLGVAGFMKELRSGFRLLMDKEKGVITAESLRKKMGFLG--LDEEEAMEMVKEGDLDGDGALSEAEFCILMFRLSPGLLQLSK
        S  GV +F D FP M+ KLGV GF+KELR GF LLMDKEKGVITAESLRK M F G  L++EE M MV+EGDLDGDGALSEAEF ILM +LSPG + LS 
Subjt:  SRTGVALFVDLFPGMVIKLGVAGFMKELRSGFRLLMDKEKGVITAESLRKKMGFLG--LDEEEAMEMVKEGDLDGDGALSEAEFCILMFRLSPGLLQLSK

Query:  ALFHQSN
        + FHQS+
Subjt:  ALFHQSN

A0A6J1JUT4 calcium-binding protein KIC-like3.0e-2882.56Show/hide
Query:  MGSRTGVALFVDLFPGMVIKLGVAGFMKELRSGFRLLMDKEKGVITAESLRKKMGFLGLDEEEAMEMVKEGDLDGDGALSEAEFCI
        MGSR  V LF D FP MV KLGV GFM+ELR GFRLLMDKEKGVITAESLR KMGFLGL+EEEAM MV EGDLDGDGALSEAEF I
Subjt:  MGSRTGVALFVDLFPGMVIKLGVAGFMKELRSGFRLLMDKEKGVITAESLRKKMGFLGLDEEEAMEMVKEGDLDGDGALSEAEFCI

A0A6P5SP84 calcium-binding protein PBP1-like8.2e-2661.61Show/hide
Query:  MGSRTGVALFVDLFPGMVIKLGVAGFMKELRSGFRLLMDKEKGVITAESLRKKMGFLGLD---EEEAMEMVKEGDLDGDGALSEAEFCILMFRLSPGLLQ
        M  R GV +F D FP MV KLG  GFMKEL +GFRLLMD+EKGVIT ESL++  G LGL+   +EE M M+KEGDLDGDG+L+E EFC LMFRLSP ++Q
Subjt:  MGSRTGVALFVDLFPGMVIKLGVAGFMKELRSGFRLLMDKEKGVITAESLRKKMGFLGLD---EEEAMEMVKEGDLDGDGALSEAEFCILMFRLSPGLLQ

Query:  LSKALFHQSNSL
         SK L  ++  L
Subjt:  LSKALFHQSNSL

A0A7N2LV84 EF-hand domain-containing protein3.7e-2661.47Show/hide
Query:  MGSRTGVALFVDLFPGMVIKLGVAGFMKELRSGFRLLMDKEKGVITAESLRKK---MGFLGLDEEEAMEMVKEGDLDGDGALSEAEFCILMFRLSPGLLQ
        MGSR GV +F D FP MV KLG  GFMKEL +GFRLLMD+EKGVIT +SL++    +G  G+ +EE M M++EGDLDGDGAL+E EFC LMFRLSPGL++
Subjt:  MGSRTGVALFVDLFPGMVIKLGVAGFMKELRSGFRLLMDKEKGVITAESLRKK---MGFLGLDEEEAMEMVKEGDLDGDGALSEAEFCILMFRLSPGLLQ

Query:  LSKALFHQS
         S  L  ++
Subjt:  LSKALFHQS

SwissProt top hitse value%identityAlignment
O81831 Calcium-binding protein KRP11.2e-1852.58Show/hide
Query:  FVDLFPGMVIKLGVAGFMKELRSGFRLLMDKEKGVITAESLRKK----MGFLGLDEEEAMEMVKEGDLDGDGALSEAEFCILMFRLSPGLLQLSKAL
        F D  P M   LG  G + EL +GF LLMD+EKGVIT ESLR+     +G   L +E+   M+KEGD D DGAL++ EFC+LMFRLSP L++ S+ L
Subjt:  FVDLFPGMVIKLGVAGFMKELRSGFRLLMDKEKGVITAESLRKK----MGFLGLDEEEAMEMVKEGDLDGDGALSEAEFCILMFRLSPGLLQLSKAL

P0DH97 Calmodulin-27.6e-0542.86Show/hide
Query:  KELRSGFRLLMDKEKGVITAESLRKKMGFLG--LDEEEAMEMVKEGDLDGDGALSEAEFCILM
        +EL+  FR+    + G I+A  LR  M  LG  L +EE  EM+KE D+DGDG ++  EF  +M
Subjt:  KELRSGFRLLMDKEKGVITAESLRKKMGFLG--LDEEEAMEMVKEGDLDGDGALSEAEFCILM

P41208 Centrin-21.2e-0536.67Show/hide
Query:  TGVALFVDLFPGMVIKLGVAGFMKELRSGFRLLMDKEKGVITAESLRKKMGFLG--LDEEEAMEMVKEGDLDGDGALSEAEFCILMFRLS
        TG   F D    M  K+      +E+   F+L  D E G I+ ++L++    LG  L +EE  EM+ E D DGDG +SE EF  +M + S
Subjt:  TGVALFVDLFPGMVIKLGVAGFMKELRSGFRLLMDKEKGVITAESLRKKMGFLG--LDEEEAMEMVKEGDLDGDGALSEAEFCILMFRLS

Q9LSQ6 Calcium-binding protein PBP15.5e-1950.52Show/hide
Query:  FVDLFPGMVIKLGVAGFMKELRSGFRLLMDKEKGVITAESLRKK----MGFLGLDEEEAMEMVKEGDLDGDGALSEAEFCILMFRLSPGLLQLSKAL
        F D FP M  KLG  G ++E+  GF LLMDK+KGVIT ESLR+     +G   L +++   M+ EGD D DGAL++ EFC+LMFRLSP L++ S+ +
Subjt:  FVDLFPGMVIKLGVAGFMKELRSGFRLLMDKEKGVITAESLRKK----MGFLGLDEEEAMEMVKEGDLDGDGALSEAEFCILMFRLSPGLLQLSKAL

Q9ZPX9 Calcium-binding protein KIC2.1e-1850.5Show/hide
Query:  FVDLFPGMVIKLGVAGFMKELRSGFRLLMDKEKGVITAESLRKKMGFLGLD---EEEAMEMVKEGDLDGDGALSEAEFCILMFRLSPGLLQ-----LSKA
        + D+ P M  K+ V  F+ EL  GF LL D E+ +ITAESLR+  G LG++   +E+A  MV+EGDLDGDGAL++ EFC+LM RLSP +++     L KA
Subjt:  FVDLFPGMVIKLGVAGFMKELRSGFRLLMDKEKGVITAESLRKKMGFLGLD---EEEAMEMVKEGDLDGDGALSEAEFCILMFRLSPGLLQ-----LSKA

Query:  L
        L
Subjt:  L

Arabidopsis top hitse value%identityAlignment
AT2G27030.1 calmodulin 55.4e-0642.86Show/hide
Query:  KELRSGFRLLMDKEKGVITAESLRKKMGFLG--LDEEEAMEMVKEGDLDGDGALSEAEFCILM
        +EL+  FR+    + G I+A  LR  M  LG  L +EE  EM+KE D+DGDG ++  EF  +M
Subjt:  KELRSGFRLLMDKEKGVITAESLRKKMGFLG--LDEEEAMEMVKEGDLDGDGALSEAEFCILM

AT2G41110.1 calmodulin 25.4e-0642.86Show/hide
Query:  KELRSGFRLLMDKEKGVITAESLRKKMGFLG--LDEEEAMEMVKEGDLDGDGALSEAEFCILM
        +EL+  FR+    + G I+A  LR  M  LG  L +EE  EM+KE D+DGDG ++  EF  +M
Subjt:  KELRSGFRLLMDKEKGVITAESLRKKMGFLG--LDEEEAMEMVKEGDLDGDGALSEAEFCILM

AT2G46600.1 Calcium-binding EF-hand family protein1.5e-1950.5Show/hide
Query:  FVDLFPGMVIKLGVAGFMKELRSGFRLLMDKEKGVITAESLRKKMGFLGLD---EEEAMEMVKEGDLDGDGALSEAEFCILMFRLSPGLLQ-----LSKA
        + D+ P M  K+ V  F+ EL  GF LL D E+ +ITAESLR+  G LG++   +E+A  MV+EGDLDGDGAL++ EFC+LM RLSP +++     L KA
Subjt:  FVDLFPGMVIKLGVAGFMKELRSGFRLLMDKEKGVITAESLRKKMGFLGLD---EEEAMEMVKEGDLDGDGALSEAEFCILMFRLSPGLLQ-----LSKA

Query:  L
        L
Subjt:  L

AT4G27280.1 Calcium-binding EF-hand family protein8.6e-2052.58Show/hide
Query:  FVDLFPGMVIKLGVAGFMKELRSGFRLLMDKEKGVITAESLRKK----MGFLGLDEEEAMEMVKEGDLDGDGALSEAEFCILMFRLSPGLLQLSKAL
        F D  P M   LG  G + EL +GF LLMD+EKGVIT ESLR+     +G   L +E+   M+KEGD D DGAL++ EFC+LMFRLSP L++ S+ L
Subjt:  FVDLFPGMVIKLGVAGFMKELRSGFRLLMDKEKGVITAESLRKK----MGFLGLDEEEAMEMVKEGDLDGDGALSEAEFCILMFRLSPGLLQLSKAL

AT5G54490.1 pinoid-binding protein 13.9e-2050.52Show/hide
Query:  FVDLFPGMVIKLGVAGFMKELRSGFRLLMDKEKGVITAESLRKK----MGFLGLDEEEAMEMVKEGDLDGDGALSEAEFCILMFRLSPGLLQLSKAL
        F D FP M  KLG  G ++E+  GF LLMDK+KGVIT ESLR+     +G   L +++   M+ EGD D DGAL++ EFC+LMFRLSP L++ S+ +
Subjt:  FVDLFPGMVIKLGVAGFMKELRSGFRLLMDKEKGVITAESLRKK----MGFLGLDEEEAMEMVKEGDLDGDGALSEAEFCILMFRLSPGLLQLSKAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTCTCGAACCGGGGTCGCTTTGTTCGTAGATTTGTTCCCCGGAATGGTGATCAAACTGGGCGTTGCAGGGTTCATGAAGGAGCTGAGGTCTGGATTTCGTTTGTT
GATGGATAAGGAAAAGGGGGTCATTACAGCAGAGAGCTTGAGAAAAAAGATGGGATTTTTGGGATTGGATGAAGAAGAAGCTATGGAAATGGTGAAAGAAGGAGATTTGG
ATGGAGATGGAGCTTTGAGTGAAGCTGAATTTTGTATTCTCATGTTTAGACTTAGCCCTGGATTGTTGCAATTATCTAAAGCTTTGTTTCACCAATCTAATTCTCTTTTT
TATACAAACCTTAAGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGTCTCGAACCGGGGTCGCTTTGTTCGTAGATTTGTTCCCCGGAATGGTGATCAAACTGGGCGTTGCAGGGTTCATGAAGGAGCTGAGGTCTGGATTTCGTTTGTT
GATGGATAAGGAAAAGGGGGTCATTACAGCAGAGAGCTTGAGAAAAAAGATGGGATTTTTGGGATTGGATGAAGAAGAAGCTATGGAAATGGTGAAAGAAGGAGATTTGG
ATGGAGATGGAGCTTTGAGTGAAGCTGAATTTTGTATTCTCATGTTTAGACTTAGCCCTGGATTGTTGCAATTATCTAAAGCTTTGTTTCACCAATCTAATTCTCTTTTT
TATACAAACCTTAAGAAATAG
Protein sequenceShow/hide protein sequence
MGSRTGVALFVDLFPGMVIKLGVAGFMKELRSGFRLLMDKEKGVITAESLRKKMGFLGLDEEEAMEMVKEGDLDGDGALSEAEFCILMFRLSPGLLQLSKALFHQSNSLF
YTNLKK