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Sed0016436 (gene) of Chayote v1 genome

Gene IDSed0016436
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG12:34634072..34634692
RNA-Seq ExpressionSed0016436
SyntenySed0016436
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057761.1 hypothetical protein E6C27_scaffold274G00440 [Cucumis melo var. makuwa]8.7e-3350.92Show/hide
Query:  EHDLISSLQRHGNATFSASSAWRIRTNQLAQDDIRRERTAAVASRGGFRGRRLSYD----------NIDFLHHTYC-----NDHILVPPIQSSDSGEDFT
        E +LISSL RHG    +  S W+IRTNQLA DDIRRER AA+AS G  +GRRLSYD          N DFLH  Y      +D I++    SSDSGE+  
Subjt:  EHDLISSLQRHGNATFSASSAWRIRTNQLAQDDIRRERTAAVASRGGFRGRRLSYD----------NIDFLHHTYC-----NDHILVPPIQSSDSGEDFT

Query:  DNRNRGKQEQLPVCLNALSYSSASSSSSPSPPPPPLLGKKAKQQMAMPIPTKLQQNVTHTDAE-NTETW--CKLGKWGLGLPLLAFAFALVVMLIFSVCC
              K EQ+PVCLNALSYS ASSSSS S     L+  + K++MA     K+++NVT    E   ETW  CK+GKW +GL  L  A A V M++FS+ C
Subjt:  DNRNRGKQEQLPVCLNALSYSSASSSSSPSPPPPPLLGKKAKQQMAMPIPTKLQQNVTHTDAE-NTETW--CKLGKWGLGLPLLAFAFALVVMLIFSVCC

Query:  LGFRAYDEQQLPFLLVPT
        LGF   DE Q PFLLVPT
Subjt:  LGFRAYDEQQLPFLLVPT

KAG6589372.1 hypothetical protein SDJN03_14795, partial [Cucurbita argyrosperma subsp. sororia]4.8e-3952.04Show/hide
Query:  DSSPEHDLISSLQRHGNATFSASSAWRIRTNQLAQDDIRRERTAAVASRGGFRGRRLSYDNID--------FLHHTYCN----DHILVPPIQSSDSGEDF
        DS PE DLISSL RHG ATFSASS W+IRTN+LAQD+I RER AA+   G F GRRLS+D++D         LH  Y N    D I+ P +QSSDS +D 
Subjt:  DSSPEHDLISSLQRHGNATFSASSAWRIRTNQLAQDDIRRERTAAVASRGGFRGRRLSYDNID--------FLHHTYCN----DHILVPPIQSSDSGEDF

Query:  TDNRNRGK---QEQLPVCLNALSYSSASSSSSPSPPPPPLLGKKAKQQMAMPIPTKLQQNVTHTDAENTE--TWCKLGKWGLGLPLLAFAFALVVMLIFS
          NR  GK   +E++PVCLN LSYSSASSSSS S       G  A  Q+      K ++NV  +     E    C++G W +GL  L  A A VVMLIFS
Subjt:  TDNRNRGK---QEQLPVCLNALSYSSASSSSSPSPPPPPLLGKKAKQQMAMPIPTKLQQNVTHTDAENTE--TWCKLGKWGLGLPLLAFAFALVVMLIFS

Query:  VCCLGFRAYDEQQLPFLLVPT
          CL F AY+E++LPFLLVPT
Subjt:  VCCLGFRAYDEQQLPFLLVPT

KGN63472.1 hypothetical protein Csa_014116 [Cucumis sativus]4.0e-2243.35Show/hide
Query:  DLISSLQRHGNATFSASSAWRIRTNQLAQDDIRRERTAAVASRGGFRGRRLSYDN-IDFLHHTYCNDHILVPPIQSSDSGED-FTDNRNRGKQEQLPVCL
        +LIS+L RH     + SS+W+IRTNQLA ++IR ER AA+AS G  + RRLSYD+ ID   H   N  +    +  S   +D    + + G+++   VCL
Subjt:  DLISSLQRHGNATFSASSAWRIRTNQLAQDDIRRERTAAVASRGGFRGRRLSYDN-IDFLHHTYCNDHILVPPIQSSDSGED-FTDNRNRGKQEQLPVCL

Query:  NALSYSSASSSSSPSPPPPPLLGKKAKQQMAMPIPTKLQQNVTHTDAE---NTETWCKLGKWGLGLPLLAFAFALVVMLIFSVCCLGFRAYDEQQLPFLL
        NALSYS ASSSSS     P     + K+QMA     ++++NV     E    T   CK+G W +GL  L  A A V M+IFS+ CLG    +E+Q PFLL
Subjt:  NALSYSSASSSSSPSPPPPPLLGKKAKQQMAMPIPTKLQQNVTHTDAE---NTETWCKLGKWGLGLPLLAFAFALVVMLIFSVCCLGFRAYDEQQLPFLL

Query:  VPT
        VPT
Subjt:  VPT

TYJ98442.1 hypothetical protein E5676_scaffold350G00430 [Cucumis melo var. makuwa]1.6e-3150.23Show/hide
Query:  EHDLISSLQRHGNATFSASSAWRIRTNQLAQDDIRRERTAAVASRGGFRGRRLSYD----------NIDFLHHTYC------NDHILVPPIQSSDSGEDF
        E +LISSL RHG    +  S W+IRTNQLA DDIRRER AA+AS G  +GRRLSYD          N DFLH  Y       +D I++    SSDSGE+ 
Subjt:  EHDLISSLQRHGNATFSASSAWRIRTNQLAQDDIRRERTAAVASRGGFRGRRLSYD----------NIDFLHHTYC------NDHILVPPIQSSDSGEDF

Query:  TDNRNRGKQEQLPVCLNALSYSSASSSSSPSPPPPPLLGKKAKQQMAMPIPTKLQQNVTHTDAE-NTETW--CKLGKWGLGLPLLAFAFALVVMLIFSVC
               K EQ+PVCLNALSYS ASSSSS S     L+  + K++MA     K+++NVT    E   ETW  CK+GKW +GL  L  A A V M++FS+ 
Subjt:  TDNRNRGKQEQLPVCLNALSYSSASSSSSPSPPPPPLLGKKAKQQMAMPIPTKLQQNVTHTDAE-NTETW--CKLGKWGLGLPLLAFAFALVVMLIFSVC

Query:  CLGFRAYDEQQLPFLLVPT
        CL F   DE Q PFLLVPT
Subjt:  CLGFRAYDEQQLPFLLVPT

XP_022134742.1 uncharacterized protein LOC111006938 [Momordica charantia]3.1e-1445.77Show/hide
Query:  EHDLISSLQRHGNATFSASSAWRIRTNQLAQDDIRRERTAAVASRGGFRGRRLSYDNIDFLHHTYCNDHILVPPIQSSDSGEDFTDNRNRGKQEQLPVCL
        E +LIS LQR G+AT S SS W+IRTN+LAQ + RRER AA A+      R+LSY+++                + S D           G Q+Q PVCL
Subjt:  EHDLISSLQRHGNATFSASSAWRIRTNQLAQDDIRRERTAAVASRGGFRGRRLSYDNIDFLHHTYCNDHILVPPIQSSDSGEDFTDNRNRGKQEQLPVCL

Query:  NALSYSSASSSSSPSPPPPPLLGKKAKQQMAMPIP-TKLQQN
        NALSYSSASSSSS +    P LG+  KQQ  M  P T+L+Q+
Subjt:  NALSYSSASSSSSPSPPPPPLLGKKAKQQMAMPIP-TKLQQN

TrEMBL top hitse value%identityAlignment
A0A0A0LRR5 Uncharacterized protein2.0e-2243.35Show/hide
Query:  DLISSLQRHGNATFSASSAWRIRTNQLAQDDIRRERTAAVASRGGFRGRRLSYDN-IDFLHHTYCNDHILVPPIQSSDSGED-FTDNRNRGKQEQLPVCL
        +LIS+L RH     + SS+W+IRTNQLA ++IR ER AA+AS G  + RRLSYD+ ID   H   N  +    +  S   +D    + + G+++   VCL
Subjt:  DLISSLQRHGNATFSASSAWRIRTNQLAQDDIRRERTAAVASRGGFRGRRLSYDN-IDFLHHTYCNDHILVPPIQSSDSGED-FTDNRNRGKQEQLPVCL

Query:  NALSYSSASSSSSPSPPPPPLLGKKAKQQMAMPIPTKLQQNVTHTDAE---NTETWCKLGKWGLGLPLLAFAFALVVMLIFSVCCLGFRAYDEQQLPFLL
        NALSYS ASSSSS     P     + K+QMA     ++++NV     E    T   CK+G W +GL  L  A A V M+IFS+ CLG    +E+Q PFLL
Subjt:  NALSYSSASSSSSPSPPPPPLLGKKAKQQMAMPIPTKLQQNVTHTDAE---NTETWCKLGKWGLGLPLLAFAFALVVMLIFSVCCLGFRAYDEQQLPFLL

Query:  VPT
        VPT
Subjt:  VPT

A0A5A7UWC4 Uncharacterized protein4.2e-3350.92Show/hide
Query:  EHDLISSLQRHGNATFSASSAWRIRTNQLAQDDIRRERTAAVASRGGFRGRRLSYD----------NIDFLHHTYC-----NDHILVPPIQSSDSGEDFT
        E +LISSL RHG    +  S W+IRTNQLA DDIRRER AA+AS G  +GRRLSYD          N DFLH  Y      +D I++    SSDSGE+  
Subjt:  EHDLISSLQRHGNATFSASSAWRIRTNQLAQDDIRRERTAAVASRGGFRGRRLSYD----------NIDFLHHTYC-----NDHILVPPIQSSDSGEDFT

Query:  DNRNRGKQEQLPVCLNALSYSSASSSSSPSPPPPPLLGKKAKQQMAMPIPTKLQQNVTHTDAE-NTETW--CKLGKWGLGLPLLAFAFALVVMLIFSVCC
              K EQ+PVCLNALSYS ASSSSS S     L+  + K++MA     K+++NVT    E   ETW  CK+GKW +GL  L  A A V M++FS+ C
Subjt:  DNRNRGKQEQLPVCLNALSYSSASSSSSPSPPPPPLLGKKAKQQMAMPIPTKLQQNVTHTDAE-NTETW--CKLGKWGLGLPLLAFAFALVVMLIFSVCC

Query:  LGFRAYDEQQLPFLLVPT
        LGF   DE Q PFLLVPT
Subjt:  LGFRAYDEQQLPFLLVPT

A0A5D3BFC1 Uncharacterized protein7.9e-3250.23Show/hide
Query:  EHDLISSLQRHGNATFSASSAWRIRTNQLAQDDIRRERTAAVASRGGFRGRRLSYD----------NIDFLHHTYC------NDHILVPPIQSSDSGEDF
        E +LISSL RHG    +  S W+IRTNQLA DDIRRER AA+AS G  +GRRLSYD          N DFLH  Y       +D I++    SSDSGE+ 
Subjt:  EHDLISSLQRHGNATFSASSAWRIRTNQLAQDDIRRERTAAVASRGGFRGRRLSYD----------NIDFLHHTYC------NDHILVPPIQSSDSGEDF

Query:  TDNRNRGKQEQLPVCLNALSYSSASSSSSPSPPPPPLLGKKAKQQMAMPIPTKLQQNVTHTDAE-NTETW--CKLGKWGLGLPLLAFAFALVVMLIFSVC
               K EQ+PVCLNALSYS ASSSSS S     L+  + K++MA     K+++NVT    E   ETW  CK+GKW +GL  L  A A V M++FS+ 
Subjt:  TDNRNRGKQEQLPVCLNALSYSSASSSSSPSPPPPPLLGKKAKQQMAMPIPTKLQQNVTHTDAE-NTETW--CKLGKWGLGLPLLAFAFALVVMLIFSVC

Query:  CLGFRAYDEQQLPFLLVPT
        CL F   DE Q PFLLVPT
Subjt:  CLGFRAYDEQQLPFLLVPT

A0A6J1C0G4 uncharacterized protein LOC1110069381.5e-1445.77Show/hide
Query:  EHDLISSLQRHGNATFSASSAWRIRTNQLAQDDIRRERTAAVASRGGFRGRRLSYDNIDFLHHTYCNDHILVPPIQSSDSGEDFTDNRNRGKQEQLPVCL
        E +LIS LQR G+AT S SS W+IRTN+LAQ + RRER AA A+      R+LSY+++                + S D           G Q+Q PVCL
Subjt:  EHDLISSLQRHGNATFSASSAWRIRTNQLAQDDIRRERTAAVASRGGFRGRRLSYDNIDFLHHTYCNDHILVPPIQSSDSGEDFTDNRNRGKQEQLPVCL

Query:  NALSYSSASSSSSPSPPPPPLLGKKAKQQMAMPIP-TKLQQN
        NALSYSSASSSSS +    P LG+  KQQ  M  P T+L+Q+
Subjt:  NALSYSSASSSSSPSPPPPPLLGKKAKQQMAMPIP-TKLQQN

A0A6P5SXC7 uncharacterized protein LOC1107603576.3e-0537.59Show/hide
Query:  MLDSSPEHDLISSLQRHGNATFSASSAWRIRTNQLAQDDIRRERTAAVASRGGFRGRRLSYDN-------IDFLHHTYCNDHIL-----VPPIQSSDSGE
        +LD+SP H L+SSLQ HG +   +   WR+RTN L  ++IRRER AA+ S G  +GRRL                  +C  + L     V  +   DS  
Subjt:  MLDSSPEHDLISSLQRHGNATFSASSAWRIRTNQLAQDDIRRERTAAVASRGGFRGRRLSYDN-------IDFLHHTYCNDHIL-----VPPIQSSDSGE

Query:  DFTDNRNRGKQEQLPVCLNALSYSSASSSSSPS
        D  D+   GK +++ VC    S +S+SSSSS S
Subjt:  DFTDNRNRGKQEQLPVCLNALSYSSASSSSSPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGGATTCATCTCCAGAACACGACCTAATCTCCTCGCTCCAGCGCCATGGAAATGCAACATTCTCGGCTTCCTCCGCCTGGAGGATTCGGACCAACCAGTTGGCTCA
GGACGACATTCGAAGAGAACGAACAGCCGCTGTTGCTAGCCGTGGTGGATTCAGGGGAAGAAGGCTTTCTTACGATAATATCGATTTCTTACACCACACTTACTGCAATG
ACCATATCCTCGTTCCCCCCATTCAATCATCCGACTCCGGTGAAGACTTTACCGATAATCGTAACAGAGGAAAACAAGAACAACTTCCCGTTTGTTTAAACGCTTTGTCT
TATTCCTCTGCCTCATCTTCCTCTTCTCCTTCTCCTCCTCCTCCTCCTCTGTTGGGTAAGAAAGCAAAACAACAAATGGCCATGCCCATCCCCACCAAGCTACAACAAAA
TGTGACGCACACTGATGCTGAGAATACAGAAACTTGGTGCAAATTGGGAAAATGGGGTCTGGGTTTACCCTTGCTTGCCTTTGCTTTTGCTTTGGTTGTTATGCTTATAT
TTTCTGTATGTTGTTTAGGGTTTAGAGCATATGATGAACAACAACTACCGTTTCTTTTAGTTCCAACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTGGATTCATCTCCAGAACACGACCTAATCTCCTCGCTCCAGCGCCATGGAAATGCAACATTCTCGGCTTCCTCCGCCTGGAGGATTCGGACCAACCAGTTGGCTCA
GGACGACATTCGAAGAGAACGAACAGCCGCTGTTGCTAGCCGTGGTGGATTCAGGGGAAGAAGGCTTTCTTACGATAATATCGATTTCTTACACCACACTTACTGCAATG
ACCATATCCTCGTTCCCCCCATTCAATCATCCGACTCCGGTGAAGACTTTACCGATAATCGTAACAGAGGAAAACAAGAACAACTTCCCGTTTGTTTAAACGCTTTGTCT
TATTCCTCTGCCTCATCTTCCTCTTCTCCTTCTCCTCCTCCTCCTCCTCTGTTGGGTAAGAAAGCAAAACAACAAATGGCCATGCCCATCCCCACCAAGCTACAACAAAA
TGTGACGCACACTGATGCTGAGAATACAGAAACTTGGTGCAAATTGGGAAAATGGGGTCTGGGTTTACCCTTGCTTGCCTTTGCTTTTGCTTTGGTTGTTATGCTTATAT
TTTCTGTATGTTGTTTAGGGTTTAGAGCATATGATGAACAACAACTACCGTTTCTTTTAGTTCCAACTTAG
Protein sequenceShow/hide protein sequence
MLDSSPEHDLISSLQRHGNATFSASSAWRIRTNQLAQDDIRRERTAAVASRGGFRGRRLSYDNIDFLHHTYCNDHILVPPIQSSDSGEDFTDNRNRGKQEQLPVCLNALS
YSSASSSSSPSPPPPPLLGKKAKQQMAMPIPTKLQQNVTHTDAENTETWCKLGKWGLGLPLLAFAFALVVMLIFSVCCLGFRAYDEQQLPFLLVPT