; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0016457 (gene) of Chayote v1 genome

Gene IDSed0016457
OrganismSechium edule (Chayote v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG11:35097927..35098634
RNA-Seq ExpressionSed0016457
SyntenySed0016457
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG48193.1 hypothetical protein EZV62_027487 [Acer yangbiense]1.1e-3435.06Show/hide
Query:  MEEFEI-QLQRMRITDEERACRVEIGDNDVEEADGDLKNSAYCKLLSSKSSSAEAFRKLMPKIWDLGYKVEIESLGKNLFQCHFASLDEKLSITEGGPWS
        M E EI QL      ++E A   EI ++ +++ D D+      K+L+ K  + EAF+ L+ +IW+   +VE+E +G+N F  HF + + +  +   GPW 
Subjt:  MEEFEI-QLQRMRITDEERACRVEIGDNDVEEADGDLKNSAYCKLLSSKSSSAEAFRKLMPKIWDLGYKVEIESLGKNLFQCHFASLDEKLSITEGGPWS

Query:  FDNGLLVFEDSFGKALPEELDFNLVCFWIHVKKLPSMCLTSRWAKAIGNMIGEYRDVDIDENNRCRGRTLRIKVKIDVSKPLKRGVYIKLGSMATIGGSK
        F   L+V E   G     +L FN   FW+ +  +P MC+  R  K +   IGE  ++   E+  C G+ +R+KV++D++KPLKR + IKLG    I    
Subjt:  FDNGLLVFEDSFGKALPEELDFNLVCFWIHVKKLPSMCLTSRWAKAIGNMIGEYRDVDIDENNRCRGRTLRIKVKIDVSKPLKRGVYIKLGSMATIGGSK

Query:  IAYERLLEFCLGCGRVGHGTKECREIEIERS
        + YERL +FC  CGR+GH  +EC + + +R+
Subjt:  IAYERLLEFCLGCGRVGHGTKECREIEIERS

TXG57113.1 hypothetical protein EZV62_018426 [Acer yangbiense]1.1e-3435.96Show/hide
Query:  MEEFEIQ--LQRMRITDEERACRVEIGDNDVEEADGDLKNSAYCKLLSSKSSSAEAFRKLMPKIWDLGYKVEIESLGKNLFQCHFASLDEKLSITEGGPW
        M E EI    + + I +E+RA  +E+ +    +   D+      K+LS K  + EAF+ L+ +IW+   +VE+E +G N F  +F + +++  +   GPW
Subjt:  MEEFEIQ--LQRMRITDEERACRVEIGDNDVEEADGDLKNSAYCKLLSSKSSSAEAFRKLMPKIWDLGYKVEIESLGKNLFQCHFASLDEKLSITEGGPW

Query:  SFDNGLLVFEDSFGKALPEELDFNLVCFWIHVKKLPSMCLTSRWAKAIGNMIGEYRDVDIDENNRCRGRTLRIKVKIDVSKPLKRGVYIKLGSMATIGGS
         F N L+V E   G     +L FN   FW+ +  +P +C+  R AK +   IGE  ++ + E+  C G+ +R+KV+ID+ KPLKR + +KLG    I   
Subjt:  SFDNGLLVFEDSFGKALPEELDFNLVCFWIHVKKLPSMCLTSRWAKAIGNMIGEYRDVDIDENNRCRGRTLRIKVKIDVSKPLKRGVYIKLGSMATIGGS

Query:  KIAYERLLEFCLGCGRVGHGTKECREIE
         + YERL EFC  CG++GHG KEC + E
Subjt:  KIAYERLLEFCLGCGRVGHGTKECREIE

TXG57799.1 hypothetical protein EZV62_015628 [Acer yangbiense]6.2e-3534.36Show/hide
Query:  QRMRITDEERACRVEIGDNDVEEADGDLKNSAYCKLLSSKSSSAEAFRKLMPKIWDLGYKVEIESLGKNLFQCHFASLDEKLSITEGGPWSFDNGLLVFE
        +R+ I DE+     EI + D+++   D+      ++LS K  + +AF+ L+ +IW    +VE+E +G+N F  +F + +++  +   GPW F N L+V E
Subjt:  QRMRITDEERACRVEIGDNDVEEADGDLKNSAYCKLLSSKSSSAEAFRKLMPKIWDLGYKVEIESLGKNLFQCHFASLDEKLSITEGGPWSFDNGLLVFE

Query:  DSFGKALPEELDFNLVCFWIHVKKLPSMCLTSRWAKAIGNMIGEYRDVDIDENNRCRGRTLRIKVKIDVSKPLKRGVYIKLGSMATIGGSKIAYERLLEF
           G     +L FN    W+ +  +P MC+  R  + +   IGE  ++   E+  C G+ +R+KVKID++KPLK+ + +KLG    +    + YERL EF
Subjt:  DSFGKALPEELDFNLVCFWIHVKKLPSMCLTSRWAKAIGNMIGEYRDVDIDENNRCRGRTLRIKVKIDVSKPLKRGVYIKLGSMATIGGSKIAYERLLEF

Query:  CLGCGRVGHGTKECREIEIERSRRLGV
        C  CGR+GHG KEC +   E +R+L +
Subjt:  CLGCGRVGHGTKECREIEIERSRRLGV

TXG69259.1 hypothetical protein EZV62_004194 [Acer yangbiense]5.6e-3636.73Show/hide
Query:  QRMRITDEERACRVEIGDNDVEEADGDLKNSAYCKLLSSKSSSAEAFRKLMPKIWDLGYKVEIESLGKNLFQCHFASLDEKLSITEGGPWSFDNGLLVFE
        + + I DE+R    +I ++  EE   D+ +    K+LS K  + EAF  ++  +W+   KVEIES+G+N+F  HF + +++  + + GPW FD  L+V E
Subjt:  QRMRITDEERACRVEIGDNDVEEADGDLKNSAYCKLLSSKSSSAEAFRKLMPKIWDLGYKVEIESLGKNLFQCHFASLDEKLSITEGGPWSFDNGLLVFE

Query:  DSFGKALPEELDFNLVCFWIHVKKLPSMCLTSRWAKAIGNMIGEYRDVDIDENNRCRGRTLRIKVKIDVSKPLKRGVYIKLGSMATIGGSKIAYERLLEF
           G     +L FN   FW+ +  +P MC+  R AK +   IGE  ++   E+  C G+ LR+KV+ID+S+PLKR + + L     +    + YER+ EF
Subjt:  DSFGKALPEELDFNLVCFWIHVKKLPSMCLTSRWAKAIGNMIGEYRDVDIDENNRCRGRTLRIKVKIDVSKPLKRGVYIKLGSMATIGGSKIAYERLLEF

Query:  CLGCGRVGHGTKECREIEIERSRRLG
        C  CGRVGHG  EC +IE ++    G
Subjt:  CLGCGRVGHGTKECREIEIERSRRLG

TXG72599.1 hypothetical protein EZV62_001178 [Acer yangbiense]3.1e-3435.93Show/hide
Query:  EFEIQLQRMRITDEERACRVEIGDNDVEEADGDLKNSAYCKLLSSKSSSAEAFRKLMPKIWDLGYKVEIESLGKNLFQCHFASLDEKLSITEGGPWSFDN
        E E   + M + DE+ A  +E+ +  V +   D+      K+L+ K  + EAF+ L+ +IW    +VE+E +G N+F  +F +  ++  +   GPW F N
Subjt:  EFEIQLQRMRITDEERACRVEIGDNDVEEADGDLKNSAYCKLLSSKSSSAEAFRKLMPKIWDLGYKVEIESLGKNLFQCHFASLDEKLSITEGGPWSFDN

Query:  GLLVFEDSFGKALPEELDFNLVCFWIHVKKLPSMCLTSRWAKAIGNMIGEYRDVDIDENNRCRGRTLRIKVKIDVSKPLKRGVYIKLGSMATIGGSKIAY
         L+  E + G      ++FN   FWI +  +P +C+  R A+ +   IGE  ++ + E+  C G  LR+KV+ID+SKPLKR + +KLG+   I    + Y
Subjt:  GLLVFEDSFGKALPEELDFNLVCFWIHVKKLPSMCLTSRWAKAIGNMIGEYRDVDIDENNRCRGRTLRIKVKIDVSKPLKRGVYIKLGSMATIGGSKIAY

Query:  ERLLEFCLGCGRVGHGTKECREIEIERSRRL
        ERL EFC  CGR+GHG KEC + E+ R   L
Subjt:  ERLLEFCLGCGRVGHGTKECREIEIERSRRL

TrEMBL top hitse value%identityAlignment
A0A5C7HLY4 CCHC-type domain-containing protein3.0e-3534.36Show/hide
Query:  QRMRITDEERACRVEIGDNDVEEADGDLKNSAYCKLLSSKSSSAEAFRKLMPKIWDLGYKVEIESLGKNLFQCHFASLDEKLSITEGGPWSFDNGLLVFE
        +R+ I DE+     EI + D+++   D+      ++LS K  + +AF+ L+ +IW    +VE+E +G+N F  +F + +++  +   GPW F N L+V E
Subjt:  QRMRITDEERACRVEIGDNDVEEADGDLKNSAYCKLLSSKSSSAEAFRKLMPKIWDLGYKVEIESLGKNLFQCHFASLDEKLSITEGGPWSFDNGLLVFE

Query:  DSFGKALPEELDFNLVCFWIHVKKLPSMCLTSRWAKAIGNMIGEYRDVDIDENNRCRGRTLRIKVKIDVSKPLKRGVYIKLGSMATIGGSKIAYERLLEF
           G     +L FN    W+ +  +P MC+  R  + +   IGE  ++   E+  C G+ +R+KVKID++KPLK+ + +KLG    +    + YERL EF
Subjt:  DSFGKALPEELDFNLVCFWIHVKKLPSMCLTSRWAKAIGNMIGEYRDVDIDENNRCRGRTLRIKVKIDVSKPLKRGVYIKLGSMATIGGSKIAYERLLEF

Query:  CLGCGRVGHGTKECREIEIERSRRLGV
        C  CGR+GHG KEC +   E +R+L +
Subjt:  CLGCGRVGHGTKECREIEIERSRRLGV

A0A5C7I2R5 CCHC-type domain-containing protein4.3e-3435.32Show/hide
Query:  QRMRITDEERACRVEIGDNDVEEADGDLKNSAYCKLLSSKSSSAEAFRKLMPKIWDLGYKVEIESLGKNLFQCHFASLDEKLSITEGGPWSFDNGLLVFE
        + + + DE+ A  +E+ ++  +E D D+      K+LS K  + EAF+ L+ +IW+    V++E +  N+F  HFA+ +++  +   GPW F N L+V E
Subjt:  QRMRITDEERACRVEIGDNDVEEADGDLKNSAYCKLLSSKSSSAEAFRKLMPKIWDLGYKVEIESLGKNLFQCHFASLDEKLSITEGGPWSFDNGLLVFE

Query:  DSFGKALPEELDFNLVCFWIHVKKLPSMCLTSRWAKAIGNMIGEYRDVDIDENNRCRGRTLRIKVKIDVSKPLKRGVYIKLGSMATIGGSKIAYERLLEF
           G     +L FN   FWI +  +P  C+  R AK +   IGE  ++   E+  CRG+ +R+KV+ID+SK LKR + +KL     I    + YERL +F
Subjt:  DSFGKALPEELDFNLVCFWIHVKKLPSMCLTSRWAKAIGNMIGEYRDVDIDENNRCRGRTLRIKVKIDVSKPLKRGVYIKLGSMATIGGSKIAYERLLEF

Query:  CLGCGRVGHGTKECREIE
        C  CG++GH  +EC++ E
Subjt:  CLGCGRVGHGTKECREIE

A0A5C7I5U3 Uncharacterized protein1.9e-3436.92Show/hide
Query:  DEERACRVEIGDNDVEEADGDLKNSAYCKLLSSKSSSAEAFRKLMPKIWDLGYKVEIESLGKNLFQCHFASLDEKLSITEGGPWSFDNGLLVFEDSFGKA
        D  RA  + I      E+  ++ +    K+LS K  + EAF+ +M K+W+    +EIE++G+N F  HF  L+++  +   G W F+N LL+ E   G  
Subjt:  DEERACRVEIGDNDVEEADGDLKNSAYCKLLSSKSSSAEAFRKLMPKIWDLGYKVEIESLGKNLFQCHFASLDEKLSITEGGPWSFDNGLLVFEDSFGKA

Query:  LPEELDFNLVCFWIHVKKLPSMCLTSRWAKAIGNMIGEYRDVDIDENNRCRGRTLRIKVKIDVSKPLKRGVYIKLGSMATIGGSKIAYERLLEFCLGCGR
           ++ F    FW+    +P +C+  R A+ I  MIGE  ++ + EN  C G+ LR+KV IDVSKPL +GV + L    T  G+ I YERL EFC GCGR
Subjt:  LPEELDFNLVCFWIHVKKLPSMCLTSRWAKAIGNMIGEYRDVDIDENNRCRGRTLRIKVKIDVSKPLKRGVYIKLGSMATIGGSKIAYERLLEFCLGCGR

Query:  VGHGTKECREIEIE
        +GH  ++  + +I+
Subjt:  VGHGTKECREIEIE

A0A5C7IJL3 CCHC-type domain-containing protein2.7e-3636.73Show/hide
Query:  QRMRITDEERACRVEIGDNDVEEADGDLKNSAYCKLLSSKSSSAEAFRKLMPKIWDLGYKVEIESLGKNLFQCHFASLDEKLSITEGGPWSFDNGLLVFE
        + + I DE+R    +I ++  EE   D+ +    K+LS K  + EAF  ++  +W+   KVEIES+G+N+F  HF + +++  + + GPW FD  L+V E
Subjt:  QRMRITDEERACRVEIGDNDVEEADGDLKNSAYCKLLSSKSSSAEAFRKLMPKIWDLGYKVEIESLGKNLFQCHFASLDEKLSITEGGPWSFDNGLLVFE

Query:  DSFGKALPEELDFNLVCFWIHVKKLPSMCLTSRWAKAIGNMIGEYRDVDIDENNRCRGRTLRIKVKIDVSKPLKRGVYIKLGSMATIGGSKIAYERLLEF
           G     +L FN   FW+ +  +P MC+  R AK +   IGE  ++   E+  C G+ LR+KV+ID+S+PLKR + + L     +    + YER+ EF
Subjt:  DSFGKALPEELDFNLVCFWIHVKKLPSMCLTSRWAKAIGNMIGEYRDVDIDENNRCRGRTLRIKVKIDVSKPLKRGVYIKLGSMATIGGSKIAYERLLEF

Query:  CLGCGRVGHGTKECREIEIERSRRLG
        C  CGRVGHG  EC +IE ++    G
Subjt:  CLGCGRVGHGTKECREIEIERSRRLG

A0A5E4G034 PREDICTED: DUF4283 domain-containing1.5e-3435.4Show/hide
Query:  MEEFEIQLQRMRITDEERACRVEIGDNDVEEADGDLKNSAYCKLLSSKSSSAEAFRKLMPKIWDLGYKVEIESLGKNLFQCHFASLDEKLSITEGGPWSF
        M+E    L++  I  E+    +++  ND+++    LK S   K+L++ + + EAF++ M KIW    +V ++ +G+NLF   FA+  ++L +   GPW+F
Subjt:  MEEFEIQLQRMRITDEERACRVEIGDNDVEEADGDLKNSAYCKLLSSKSSSAEAFRKLMPKIWDLGYKVEIESLGKNLFQCHFASLDEKLSITEGGPWSF

Query:  DNGLLVFEDSFGKALPEELDFNLVCFWIHVKKLPSMCLTSRWAKAIGNMIGEYRDVDIDENNRCRGRTLRIKVKIDVSKPLKRGVYIKLGSMATIGGSKI
        D  L++ E   G   P ++      FWI V  +P  C+++   + IGN  G   DV    + +C GR LR++V +DVSKPL+RG  + L S  T+   + 
Subjt:  DNGLLVFEDSFGKALPEELDFNLVCFWIHVKKLPSMCLTSRWAKAIGNMIGEYRDVDIDENNRCRGRTLRIKVKIDVSKPLKRGVYIKLGSMATIGGSKI

Query:  AYERLLEFCLGCGRVGHGTKECREIE
         YERL EFC  CGR+GH  KEC  ++
Subjt:  AYERLLEFCLGCGRVGHGTKECREIE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G42140.1 zinc ion binding;nucleic acid binding1.1e-0825Show/hide
Query:  FASLDEKLSITEGGPWSFDNGLLVFEDSFGKALPEELDFNLVCFWIHVKKLPSMCLTSRWAKAIGNMIGEYRDVDIDENNRCRGRTLRIKVKIDVSKPLK
        F S +   SI   GPWSF++ + V +      L  + +F  + FWI ++ +P   LT+R   +IG  +G + + ++       GR + +           
Subjt:  FASLDEKLSITEGGPWSFDNGLLVFEDSFGKALPEELDFNLVCFWIHVKKLPSMCLTSRWAKAIGNMIGEYRDVDIDENNRCRGRTLRIKVKIDVSKPLK

Query:  RGVYIKLGSMATIGGSKIAYERLLEFCLGCGRVGHGTKEC
                        K  YE+L  FC  CG + H   EC
Subjt:  RGVYIKLGSMATIGGSKIAYERLLEFCLGCGRVGHGTKEC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAATTTGAGATACAACTTCAGAGGATGAGGATAACAGACGAAGAACGGGCTTGTCGGGTGGAGATAGGCGATAATGACGTTGAAGAAGCGGATGGGGATCTAAA
GAACTCAGCTTACTGTAAGTTACTTTCTTCAAAATCCTCCAGCGCTGAGGCTTTTAGAAAGCTAATGCCTAAAATTTGGGATCTGGGGTATAAAGTGGAGATAGAATCTC
TAGGGAAGAATTTATTTCAATGTCACTTTGCTAGTCTAGATGAGAAGTTGTCAATCACTGAGGGGGGACCTTGGAGCTTCGATAATGGTCTGTTAGTGTTCGAGGATTCT
TTCGGGAAGGCTCTCCCAGAAGAGTTGGATTTCAACTTAGTTTGTTTCTGGATTCATGTCAAAAAATTGCCGTCAATGTGTCTAACTAGCAGATGGGCAAAAGCTATAGG
GAATATGATAGGGGAGTATAGGGATGTGGACATTGATGAAAATAATCGATGTAGAGGACGAACTTTAAGGATTAAAGTGAAAATCGATGTGTCGAAACCGTTAAAAAGAG
GAGTGTATATCAAATTGGGATCAATGGCGACGATCGGTGGTTCAAAGATAGCTTATGAGAGATTGCTAGAATTTTGTTTGGGATGTGGAAGAGTTGGCCATGGAACAAAA
GAATGTAGAGAAATTGAAATCGAGAGGAGCAGGAGACTTGGTGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAATTTGAGATACAACTTCAGAGGATGAGGATAACAGACGAAGAACGGGCTTGTCGGGTGGAGATAGGCGATAATGACGTTGAAGAAGCGGATGGGGATCTAAA
GAACTCAGCTTACTGTAAGTTACTTTCTTCAAAATCCTCCAGCGCTGAGGCTTTTAGAAAGCTAATGCCTAAAATTTGGGATCTGGGGTATAAAGTGGAGATAGAATCTC
TAGGGAAGAATTTATTTCAATGTCACTTTGCTAGTCTAGATGAGAAGTTGTCAATCACTGAGGGGGGACCTTGGAGCTTCGATAATGGTCTGTTAGTGTTCGAGGATTCT
TTCGGGAAGGCTCTCCCAGAAGAGTTGGATTTCAACTTAGTTTGTTTCTGGATTCATGTCAAAAAATTGCCGTCAATGTGTCTAACTAGCAGATGGGCAAAAGCTATAGG
GAATATGATAGGGGAGTATAGGGATGTGGACATTGATGAAAATAATCGATGTAGAGGACGAACTTTAAGGATTAAAGTGAAAATCGATGTGTCGAAACCGTTAAAAAGAG
GAGTGTATATCAAATTGGGATCAATGGCGACGATCGGTGGTTCAAAGATAGCTTATGAGAGATTGCTAGAATTTTGTTTGGGATGTGGAAGAGTTGGCCATGGAACAAAA
GAATGTAGAGAAATTGAAATCGAGAGGAGCAGGAGACTTGGTGTATAA
Protein sequenceShow/hide protein sequence
MEEFEIQLQRMRITDEERACRVEIGDNDVEEADGDLKNSAYCKLLSSKSSSAEAFRKLMPKIWDLGYKVEIESLGKNLFQCHFASLDEKLSITEGGPWSFDNGLLVFEDS
FGKALPEELDFNLVCFWIHVKKLPSMCLTSRWAKAIGNMIGEYRDVDIDENNRCRGRTLRIKVKIDVSKPLKRGVYIKLGSMATIGGSKIAYERLLEFCLGCGRVGHGTK
ECREIEIERSRRLGV