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Sed0016473 (gene) of Chayote v1 genome

Gene IDSed0016473
OrganismSechium edule (Chayote v1)
DescriptionProtein of unknown function (DUF 3339)
Genome locationLG11:35910569..35924837
RNA-Seq ExpressionSed0016473
SyntenySed0016473
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR021775 - Protein of unknown function DUF3339


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015947.1 hypothetical protein SDJN02_21051, partial [Cucurbita argyrosperma subsp. argyrosperma]8.2e-5978.62Show/hide
Query:  MADWGPVFVAVMLFVLLTPGLLVQMPGKNRFVEFGNFHTSGVSVLVHSILYFALICIFLLAVRVH-------------------WIISESMADWAPVVIG
        MADWGPVFVAV+LFVLLTPGLLVQMPGKNRF+EFGNF TSGVS+LVHS LYFALICIFLLAV VH                   + I E M+DWAPVVIG
Subjt:  MADWGPVFVAVMLFVLLTPGLLVQMPGKNRFVEFGNFHTSGVSVLVHSILYFALICIFLLAVRVH-------------------WIISESMADWAPVVIG

Query:  VVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFIIYAVFILALRVHINTG
        VVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKA+AIHTLIFFI+YAVFILALR+HI TG
Subjt:  VVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFIIYAVFILALRVHINTG

XP_008441325.2 PREDICTED: uncharacterized protein LOC103485472 isoform X2 [Cucumis melo]2.5e-6087.32Show/hide
Query:  MADWGPVFVAVMLFVLLTPGLLVQMPGKNRFVEFGNFHTSGVSVLVHSILYFALICIFLLAVRVHW--IISESMADWAPVVIGVVLFVLLSPGLLFQFPG
        MADWGPVFVAVMLFVLLTPGLLVQMPGK+RFVEFGNF TSGVS+LVHSILYFALICIFLLAV  H   + +E+M+DWAPVVIGVVLFVLLSPGLLFQFPG
Subjt:  MADWGPVFVAVMLFVLLTPGLLVQMPGKNRFVEFGNFHTSGVSVLVHSILYFALICIFLLAVRVHW--IISESMADWAPVVIGVVLFVLLSPGLLFQFPG

Query:  NNRQFEFGSMKTNGKAVAIHTLIFFIIYAVFILALRVHINTG
        NNRQFEFGSMKTNGKAVAIHTLIFF++YAVFILAL +HI TG
Subjt:  NNRQFEFGSMKTNGKAVAIHTLIFFIIYAVFILALRVHINTG

XP_011649954.2 uncharacterized protein LOC101211888 [Cucumis sativus]2.1e-6290.14Show/hide
Query:  MADWGPVFVAVMLFVLLTPGLLVQMPGKNRFVEFGNFHTSGVSVLVHSILYFALICIFLLAVRVHWI--ISESMADWAPVVIGVVLFVLLSPGLLFQFPG
        MADWGPVFVAVMLFVLLTPGLLVQMPGK+RFVEFGNF TSGVS+LVHSILYFALICIFLLAVRVH    ISE+M+DWAPVVIGVVLFVLLSPGLLFQFPG
Subjt:  MADWGPVFVAVMLFVLLTPGLLVQMPGKNRFVEFGNFHTSGVSVLVHSILYFALICIFLLAVRVHWI--ISESMADWAPVVIGVVLFVLLSPGLLFQFPG

Query:  NNRQFEFGSMKTNGKAVAIHTLIFFIIYAVFILALRVHINTG
        NNRQFEFGSMKTNGKAVAIHTLIFF++YAVFILAL +HI TG
Subjt:  NNRQFEFGSMKTNGKAVAIHTLIFFIIYAVFILALRVHINTG

XP_015893840.1 uncharacterized protein LOC107427943 [Ziziphus jujuba]1.9e-5578.17Show/hide
Query:  MADWGPVFVAVMLFVLLTPGLLVQMPGKNRFVEFGNFHTSGVSVLVHSILYFALICIFLLAVRVHWI--ISESMADWAPVVIGVVLFVLLSPGLLFQFPG
        M+DWGPVFVAV+LF+LLTPGLL+Q+PGK+RFVEFGNF TSGVS+LVHS+LYFALICIFLLA+ VH     S +MADWAPVVIGVVLFVLL PGLLFQFPG
Subjt:  MADWGPVFVAVMLFVLLTPGLLVQMPGKNRFVEFGNFHTSGVSVLVHSILYFALICIFLLAVRVHWI--ISESMADWAPVVIGVVLFVLLSPGLLFQFPG

Query:  NNRQFEFGSMKTNGKAVAIHTLIFFIIYAVFILALRVHINTG
        +++Q EFGSMKTNGKA+A+HTLIFF +Y +FILAL VHI TG
Subjt:  NNRQFEFGSMKTNGKAVAIHTLIFFIIYAVFILALRVHINTG

XP_038884726.1 uncharacterized protein LOC120075418 [Benincasa hispida]1.3e-6188.28Show/hide
Query:  MADWGPVFVAVMLFVLLTPGLLVQMPGKNRFVEFGNFHTSGVSVLVHSILYFALICIFLLAVRVH-----WIISESMADWAPVVIGVVLFVLLSPGLLFQ
        MADWGPVFVAV+LFVLLTPGLLVQMPGKNRFVEFGNF TSGVS+LVHSILYFALICIFLLAV VH     + I ESM+DWAPVVIGVVLFVLLSPGLLFQ
Subjt:  MADWGPVFVAVMLFVLLTPGLLVQMPGKNRFVEFGNFHTSGVSVLVHSILYFALICIFLLAVRVH-----WIISESMADWAPVVIGVVLFVLLSPGLLFQ

Query:  FPGNNRQFEFGSMKTNGKAVAIHTLIFFIIYAVFILALRVHINTG
        FPGNNRQFEFGSMKTNGKAVAIHTLIFFI+Y+VFILAL VHI TG
Subjt:  FPGNNRQFEFGSMKTNGKAVAIHTLIFFIIYAVFILALRVHINTG

TrEMBL top hitse value%identityAlignment
A0A1S3B371 uncharacterized protein LOC103485472 isoform X21.2e-6087.32Show/hide
Query:  MADWGPVFVAVMLFVLLTPGLLVQMPGKNRFVEFGNFHTSGVSVLVHSILYFALICIFLLAVRVHW--IISESMADWAPVVIGVVLFVLLSPGLLFQFPG
        MADWGPVFVAVMLFVLLTPGLLVQMPGK+RFVEFGNF TSGVS+LVHSILYFALICIFLLAV  H   + +E+M+DWAPVVIGVVLFVLLSPGLLFQFPG
Subjt:  MADWGPVFVAVMLFVLLTPGLLVQMPGKNRFVEFGNFHTSGVSVLVHSILYFALICIFLLAVRVHW--IISESMADWAPVVIGVVLFVLLSPGLLFQFPG

Query:  NNRQFEFGSMKTNGKAVAIHTLIFFIIYAVFILALRVHINTG
        NNRQFEFGSMKTNGKAVAIHTLIFF++YAVFILAL +HI TG
Subjt:  NNRQFEFGSMKTNGKAVAIHTLIFFIIYAVFILALRVHINTG

A0A6J1FLS0 uncharacterized protein LOC1114451201.6e-5565.45Show/hide
Query:  MADWGPVFVAVMLFVLLTPGLLVQMPGKNRFVEFGNFHTSGVSVLVHSILYFALICIFLLAVRVH-----------------------------------
        MADWGPVFVAV+LFVLLTPGLLVQMPGKNRF+EFGNF TSGVS+LVHS LYFALICIFLLAV VH                                   
Subjt:  MADWGPVFVAVMLFVLLTPGLLVQMPGKNRFVEFGNFHTSGVSVLVHSILYFALICIFLLAVRVH-----------------------------------

Query:  ----------------WIISESMADWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFIIYAVFILALRVHINTG
                        + I E M+DWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKA+AIHTLIFFI+YAVFILALR+HI TG
Subjt:  ----------------WIISESMADWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFIIYAVFILALRVHINTG

A0A6J1K207 uncharacterized protein LOC1114894129.1e-5665.46Show/hide
Query:  MADWGPVFVAVMLFVLLTPGLLVQMPGKNRFVEFGNFHTSGVSVLVHSILYFALICIFLLAVRVH-----------------------------------
        MADWGPVFVAV+LFVLLTPGLLVQMPGKNRF+EFGNF TSGVS+LVHS LYFALICIFLLAV VH                                   
Subjt:  MADWGPVFVAVMLFVLLTPGLLVQMPGKNRFVEFGNFHTSGVSVLVHSILYFALICIFLLAVRVH-----------------------------------

Query:  ---------WI----------ISESMADWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFIIYAVFILALRVHINTG
                 WI          I E M+DWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKA+AIHTLIFFI+YAVFILALR+HI TG
Subjt:  ---------WI----------ISESMADWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFIIYAVFILALRVHINTG

A0A6P4B5Q9 uncharacterized protein LOC1074279439.1e-5678.17Show/hide
Query:  MADWGPVFVAVMLFVLLTPGLLVQMPGKNRFVEFGNFHTSGVSVLVHSILYFALICIFLLAVRVHWI--ISESMADWAPVVIGVVLFVLLSPGLLFQFPG
        M+DWGPVFVAV+LF+LLTPGLL+Q+PGK+RFVEFGNF TSGVS+LVHS+LYFALICIFLLA+ VH     S +MADWAPVVIGVVLFVLL PGLLFQFPG
Subjt:  MADWGPVFVAVMLFVLLTPGLLVQMPGKNRFVEFGNFHTSGVSVLVHSILYFALICIFLLAVRVHWI--ISESMADWAPVVIGVVLFVLLSPGLLFQFPG

Query:  NNRQFEFGSMKTNGKAVAIHTLIFFIIYAVFILALRVHINTG
        +++Q EFGSMKTNGKA+A+HTLIFF +Y +FILAL VHI TG
Subjt:  NNRQFEFGSMKTNGKAVAIHTLIFFIIYAVFILALRVHINTG

A0A6P9EN67 uncharacterized protein LOC1090056461.3e-5478.17Show/hide
Query:  MADWGPVFVAVMLFVLLTPGLLVQMPGKNRFVEFGNFHTSGVSVLVHSILYFALICIFLLAVRVH--WIISESMADWAPVVIGVVLFVLLSPGLLFQFPG
        M+DWGPVFVAV+LF+LLTPGLL+Q+PGK++ VEFGNF TSGVS+LVHSILYFALIC+FLLAV VH   + S+ MADWAPV+IGVVLFVLL+PGLLFQ PG
Subjt:  MADWGPVFVAVMLFVLLTPGLLVQMPGKNRFVEFGNFHTSGVSVLVHSILYFALICIFLLAVRVH--WIISESMADWAPVVIGVVLFVLLSPGLLFQFPG

Query:  NNRQFEFGSMKTNGKAVAIHTLIFFIIYAVFILALRVHINTG
        +NRQ EFGS+KTNGKAVA+HTLIFF IYAV IL +RVHI TG
Subjt:  NNRQFEFGSMKTNGKAVAIHTLIFFIIYAVFILALRVHINTG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G27030.1 unknown protein2.1e-5268.31Show/hide
Query:  MADWGPVFVAVMLFVLLTPGLLVQMPGKNRFVEFGNFHTSGVSVLVHSILYFALICIFLLAVRVHW--IISESMADWAPVVIGVVLFVLLSPGLLFQFPG
        M DWGPVFVAV LFVLLTPGLL+Q+PG+ R VEFG F TSG+SV+VH+++YF L+CI LLA+++H   + S SMADWAPV++GVVLFV+LSPGLLF  PG
Subjt:  MADWGPVFVAVMLFVLLTPGLLVQMPGKNRFVEFGNFHTSGVSVLVHSILYFALICIFLLAVRVHW--IISESMADWAPVVIGVVLFVLLSPGLLFQFPG

Query:  NNRQFEFGSMKTNGKAVAIHTLIFFIIYAVFILALRVHINTG
        NNR  +FG +KTNGKA+A+HTLIFF IY + ILAL +HI TG
Subjt:  NNRQFEFGSMKTNGKAVAIHTLIFFIIYAVFILALRVHINTG

AT3G48660.1 Protein of unknown function (DUF 3339)1.0e-1967.69Show/hide
Query:  MADWGPVFVAVMLFVLLTPGLLVQMPGKNRFVEFGNFHTSGVSVLVHSILYFALICIFLLAVRVH
        MADWGPV VAV+LFVLLTPGLL Q+P + R VEFGN  TSG S+LVH+I++F LI IF +A+R+H
Subjt:  MADWGPVFVAVMLFVLLTPGLLVQMPGKNRFVEFGNFHTSGVSVLVHSILYFALICIFLLAVRVH

AT5G08391.1 Protein of unknown function (DUF 3339)2.2e-2267.69Show/hide
Query:  MADWGPVFVAVMLFVLLTPGLLVQMPGKNRFVEFGNFHTSGVSVLVHSILYFALICIFLLAVRVH
        M+DWGPV V V+LFV+LTPGLL Q+PG+ ++VEFGNF TS VSV+VHS+LYF+L+C+FLLA+++H
Subjt:  MADWGPVFVAVMLFVLLTPGLLVQMPGKNRFVEFGNFHTSGVSVLVHSILYFALICIFLLAVRVH

AT5G40970.1 Protein of unknown function (DUF 3339)2.2e-2266.67Show/hide
Query:  MADWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFIIYAVFILALRVHINTG
        MADWAPV++GVVLFV+LSPGLLF  PG++   +FG MKTNGKA+A+HTLIFF  Y + ILA+ +HI TG
Subjt:  MADWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFIIYAVFILALRVHINTG

AT5G63500.1 Protein of unknown function (DUF 3339)3.4e-1863.08Show/hide
Query:  MADWGPVFVAVMLFVLLTPGLLVQMPGKNRFVEFGNFHTSGVSVLVHSILYFALICIFLLAVRVH
        MADWGPV +AV+LFV+L+PGLL Q+P   R VEFGN  TSG S+LVH+I++F LI IF +A+ VH
Subjt:  MADWGPVFVAVMLFVLLTPGLLVQMPGKNRFVEFGNFHTSGVSVLVHSILYFALICIFLLAVRVH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATTGGGGACCGGTGTTCGTGGCGGTGATGCTGTTCGTTCTTCTAACCCCCGGTTTGCTGGTTCAGATGCCCGGCAAGAACCGGTTCGTCGAATTCGGGAATTT
CCACACCAGCGGCGTCTCCGTTCTGGTTCATTCCATCCTCTATTTTGCCCTAATCTGCATCTTCTTGTTGGCAGTTCGCGTTCATTGGATTATCTCTGAAAGTATGGCGG
ATTGGGCGCCGGTGGTGATCGGAGTTGTTCTGTTCGTGCTGCTGTCGCCGGGGCTTCTGTTTCAGTTCCCGGGGAATAATCGGCAGTTTGAGTTCGGGAGTATGAAGACC
AACGGTAAAGCTGTAGCGATTCACACTCTCATCTTCTTCATCATCTATGCCGTCTTCATCCTCGCTCTTCGTGTTCACATCAACACTGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGATTGGGGACCGGTGTTCGTGGCGGTGATGCTGTTCGTTCTTCTAACCCCCGGTTTGCTGGTTCAGATGCCCGGCAAGAACCGGTTCGTCGAATTCGGGAATTT
CCACACCAGCGGCGTCTCCGTTCTGGTTCATTCCATCCTCTATTTTGCCCTAATCTGCATCTTCTTGTTGGCAGTTCGCGTTCATTGGATTATCTCTGAAAGTATGGCGG
ATTGGGCGCCGGTGGTGATCGGAGTTGTTCTGTTCGTGCTGCTGTCGCCGGGGCTTCTGTTTCAGTTCCCGGGGAATAATCGGCAGTTTGAGTTCGGGAGTATGAAGACC
AACGGTAAAGCTGTAGCGATTCACACTCTCATCTTCTTCATCATCTATGCCGTCTTCATCCTCGCTCTTCGTGTTCACATCAACACTGGATGA
Protein sequenceShow/hide protein sequence
MADWGPVFVAVMLFVLLTPGLLVQMPGKNRFVEFGNFHTSGVSVLVHSILYFALICIFLLAVRVHWIISESMADWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKT
NGKAVAIHTLIFFIIYAVFILALRVHINTG