; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0016482 (gene) of Chayote v1 genome

Gene IDSed0016482
OrganismSechium edule (Chayote v1)
Description60S ribosomal protein L22-2
Genome locationLG07:2389657..2391591
RNA-Seq ExpressionSed0016482
SyntenySed0016482
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002671 - Ribosomal protein L22e
IPR038526 - Ribosomal protein L22e superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135607.1 60S ribosomal protein L22-2 [Cucumis sativus]4.4e-5692.74Show/hide
Query:  MSRGGASAPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGA+ PKGKKKGVTF IDC+KPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTR+K+KITV SDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGASAPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  SNKDRNVYELRYFNIAENEGEEEE
        +NKDRNVYELRYFNIAENEGEEE+
Subjt:  SNKDRNVYELRYFNIAENEGEEEE

XP_004136027.1 60S ribosomal protein L22-2 [Cucumis sativus]1.5e-5694.44Show/hide
Query:  MSRGGASA--PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG A++  PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSV+VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGGASA--PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEEE
        IASNKDRNVYELRYFNIAENEGEEE+
Subjt:  IASNKDRNVYELRYFNIAENEGEEEE

XP_022953729.1 60S ribosomal protein L22-2-like [Cucurbita moschata]3.4e-5693.65Show/hide
Query:  MSRGGASA--PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG A++  PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+V+VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGGASA--PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEEE
        IASNKDRNVYELRYFNIAENEGEEE+
Subjt:  IASNKDRNVYELRYFNIAENEGEEEE

XP_022991268.1 60S ribosomal protein L22-2-like [Cucurbita maxima]7.5e-5692.86Show/hide
Query:  MSRGGASA--PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG A++  PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+V+VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGGASA--PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEEE
        IASNKDRNVYEL+YFNIAENEGEEE+
Subjt:  IASNKDRNVYELRYFNIAENEGEEEE

XP_023548993.1 60S ribosomal protein L22-2-like [Cucurbita pepo subsp. pepo]3.4e-5693.65Show/hide
Query:  MSRGGASA--PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG A++  PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+V+VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGGASA--PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEEE
        IASNKDRNVYELRYFNIAENEGEEE+
Subjt:  IASNKDRNVYELRYFNIAENEGEEEE

TrEMBL top hitse value%identityAlignment
A0A0A0K637 Uncharacterized protein7.3e-5794.44Show/hide
Query:  MSRGGASA--PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG A++  PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSV+VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGGASA--PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEEE
        IASNKDRNVYELRYFNIAENEGEEE+
Subjt:  IASNKDRNVYELRYFNIAENEGEEEE

A0A1S3BRQ9 60S ribosomal protein L22-27.3e-5794.44Show/hide
Query:  MSRGGASA--PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG A++  PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSV+VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGGASA--PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEEE
        IASNKDRNVYELRYFNIAENEGEEE+
Subjt:  IASNKDRNVYELRYFNIAENEGEEEE

A0A5D3D2W6 60S ribosomal protein L22-2-like7.3e-5794.44Show/hide
Query:  MSRGGASA--PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG A++  PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSV+VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGGASA--PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEEE
        IASNKDRNVYELRYFNIAENEGEEE+
Subjt:  IASNKDRNVYELRYFNIAENEGEEEE

A0A6J1DLK6 60S ribosomal protein L22-27.3e-5794.44Show/hide
Query:  MSRGGASA--PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG A++  PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSV+VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGGASA--PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEEE
        IASNKDRNVYELRYFNIAENEGEEE+
Subjt:  IASNKDRNVYELRYFNIAENEGEEEE

A0A6J1GQI3 60S ribosomal protein L22-2-like1.6e-5693.65Show/hide
Query:  MSRGGASA--PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG A++  PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+V+VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGGASA--PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEEE
        IASNKDRNVYELRYFNIAENEGEEE+
Subjt:  IASNKDRNVYELRYFNIAENEGEEEE

SwissProt top hitse value%identityAlignment
Q90YU6 60S ribosomal protein L225.1e-3163.79Show/hide
Query:  KGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVY
        K KK+ + F +DC  PVED IMD A+ E+FL ERIKV GKAG LG   VS+ R K+KITV SD  FSKRYLKYLTKKYLKK+N+RDWLRV+A+ K+   Y
Subjt:  KGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVY

Query:  ELRYFNIAENEGEEEE
        ELRYF I ++E EEE+
Subjt:  ELRYFNIAENEGEEEE

Q98TF8 60S ribosomal protein L226.6e-3159.2Show/hide
Query:  MSRGGASAPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVI
        + +  A   K KK+ + F +DC  PVED IMD A+ E+FL ERIKV GKAG LG   V++ R K+KITV S+  FSKRYLKYLTKKYLKK+N+RDWLRV+
Subjt:  MSRGGASAPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVI

Query:  ASNKDRNVYELRYFNIAENEGEEEE
        A++K+   YELRYF I ++E EEEE
Subjt:  ASNKDRNVYELRYFNIAENEGEEEE

Q9FE58 60S ribosomal protein L22-33.6e-5383.87Show/hide
Query:  MSRGGASAPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRG A+A KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVS+TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGASAPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  SNKDRNVYELRYFNIAENEGEEEE
        +NKDRN+YELRYFNIAENE EEE+
Subjt:  SNKDRNVYELRYFNIAENEGEEEE

Q9M9W1 60S ribosomal protein L22-29.5e-5483.87Show/hide
Query:  MSRGGASAPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGA+  KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSV++TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGASAPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  SNKDRNVYELRYFNIAENEGEEEE
        +NKDRN+YELRYFNIAENEGEEE+
Subjt:  SNKDRNVYELRYFNIAENEGEEEE

Q9SRX7 Putative 60S ribosomal protein L22-15.4e-4170.63Show/hide
Query:  MSRGGA--SAPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        M+R GA  S    KKKGV+FVIDC+KPV+D I++IA+LEKFL ERIKV GKAGALG+SVS+TR   KI VN++SNFSKRYLKYLTKKYLKK+N+RDWLRV
Subjt:  MSRGGA--SAPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEEE
        IASNKD+NVYE+RYF I +     EE
Subjt:  IASNKDRNVYELRYFNIAENEGEEEE

Arabidopsis top hitse value%identityAlignment
AT1G02830.1 Ribosomal L22e protein family3.9e-4270.63Show/hide
Query:  MSRGGA--SAPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        M+R GA  S    KKKGV+FVIDC+KPV+D I++IA+LEKFL ERIKV GKAGALG+SVS+TR   KI VN++SNFSKRYLKYLTKKYLKK+N+RDWLRV
Subjt:  MSRGGA--SAPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEEE
        IASNKD+NVYE+RYF I +     EE
Subjt:  IASNKDRNVYELRYFNIAENEGEEEE

AT3G05560.1 Ribosomal L22e protein family6.8e-5583.87Show/hide
Query:  MSRGGASAPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGA+  KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSV++TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGASAPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  SNKDRNVYELRYFNIAENEGEEEE
        +NKDRN+YELRYFNIAENEGEEE+
Subjt:  SNKDRNVYELRYFNIAENEGEEEE

AT3G05560.2 Ribosomal L22e protein family6.8e-5583.87Show/hide
Query:  MSRGGASAPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGA+  KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSV++TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGASAPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  SNKDRNVYELRYFNIAENEGEEEE
        +NKDRN+YELRYFNIAENEGEEE+
Subjt:  SNKDRNVYELRYFNIAENEGEEEE

AT3G05560.3 Ribosomal L22e protein family6.8e-5583.87Show/hide
Query:  MSRGGASAPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGA+  KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSV++TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGASAPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  SNKDRNVYELRYFNIAENEGEEEE
        +NKDRN+YELRYFNIAENEGEEE+
Subjt:  SNKDRNVYELRYFNIAENEGEEEE

AT5G27770.1 Ribosomal L22e protein family2.6e-5483.87Show/hide
Query:  MSRGGASAPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRG A+A KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVS+TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGASAPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  SNKDRNVYELRYFNIAENEGEEEE
        +NKDRN+YELRYFNIAENE EEE+
Subjt:  SNKDRNVYELRYFNIAENEGEEEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCGTGGAGGAGCATCTGCCCCAAAGGGGAAGAAGAAGGGCGTAACCTTCGTCATCGATTGCGCCAAGCCAGTTGAGGACAAGATCATGGACATCGCTTCACTGGA
GAAGTTTCTTCTCGAGAGGATTAAGGTCGGCGGAAAAGCTGGAGCGCTTGGTGACTCCGTTTCTGTCACCCGGGACAAGAACAAGATCACCGTCAACTCCGATAGCAACT
TCTCCAAAAGGTATCTTAAATACTTGACTAAGAAGTATTTGAAGAAACACAATGTCAGAGATTGGCTTCGGGTTATTGCTTCGAACAAGGACCGCAACGTTTATGAATTG
AGATACTTCAACATTGCTGAGAACGAAGGTGAGGAAGAAGAATAA
mRNA sequenceShow/hide mRNA sequence
AAAGGTCTCATGAAAACAAGTTTCCATGCATTTGCGGTAAATTAGAGAAATGACAAAACAAGGTTAGTTTCACAAATTTTAAGTCAAGTAGGCTATTTTTGCAAAATAAA
AGACACATCTTCTTCCAGCTTTAAAACAGCAACTCAAAACCCTAGATTCAGCGCCGATCGTTGTACAAATCTGTGCAAGAAATTAGGGCAAACGAGTTGCAGAGAAGAAG
CAAAAATGAGCCGTGGAGGAGCATCTGCCCCAAAGGGGAAGAAGAAGGGCGTAACCTTCGTCATCGATTGCGCCAAGCCAGTTGAGGACAAGATCATGGACATCGCTTCA
CTGGAGAAGTTTCTTCTCGAGAGGATTAAGGTCGGCGGAAAAGCTGGAGCGCTTGGTGACTCCGTTTCTGTCACCCGGGACAAGAACAAGATCACCGTCAACTCCGATAG
CAACTTCTCCAAAAGGTATCTTAAATACTTGACTAAGAAGTATTTGAAGAAACACAATGTCAGAGATTGGCTTCGGGTTATTGCTTCGAACAAGGACCGCAACGTTTATG
AATTGAGATACTTCAACATTGCTGAGAACGAAGGTGAGGAAGAAGAATAAGGTTCAAATCCTATATTTTGGAACCAGAACCATCACTTGTTGTAGGATTAGTTGAAGTGG
CCTTACTACTGAAATTATATTCCATACATTATCTTGAAGCTTTCGATATATATCAGCAAGGATTCTTTTGAGTTGTGAGATGATGCAAACACTTGTTTTACTTCTGAAGT
TTTATCTATAAATTTTGTTCTAATA
Protein sequenceShow/hide protein sequence
MSRGGASAPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYEL
RYFNIAENEGEEEE