; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0016511 (gene) of Chayote v1 genome

Gene IDSed0016511
OrganismSechium edule (Chayote v1)
Descriptionpumilio homolog 12-like
Genome locationLG10:36379613..36382238
RNA-Seq ExpressionSed0016511
SyntenySed0016511
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001313 - Pumilio RNA-binding repeat
IPR011989 - Armadillo-like helical
IPR016024 - Armadillo-type fold
IPR033133 - Pumilio homology domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645845.1 hypothetical protein Csa_017253 [Cucumis sativus]1.6e-5350.9Show/hide
Query:  MSCHVVALAKSNRYGHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYA---IEEVREALISPLIQDVENLSMHPFGNYVIQFMIIL
        M  HV+ LAK    GH+++  CF  F PQ+NELI+LR+A+NC E+   QA CCILQ CI+Y+   + +++E LISPLIQDV +LS HP+GNYVIQFMI L
Subjt:  MSCHVVALAKSNRYGHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYA---IEEVREALISPLIQDVENLSMHPFGNYVIQFMIIL

Query:  DGENLGARIIKKLKNKFLRLCLNKCGSNVVEKCLLCCDQAYVDEIILEIMDNDYNQ--LQLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFH
        DG N+G RIIK+L +KF+ L ++K GSNVVEKCL CC +   ++II EI++ +     +Q+C+N+YGNFVVQ  + +AKG+    L +AI++H   LQ H
Subjt:  DGENLGARIIKKLKNKFLRLCLNKCGSNVVEKCLLCCDQAYVDEIILEIMDNDYNQ--LQLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFH

Query:  PYGKHVTAAVDFILKKSKLRVY
         YG++V +++    KK+KL  Y
Subjt:  PYGKHVTAAVDFILKKSKLRVY

KAG9130239.1 hypothetical protein Leryth_004303 [Lithospermum erythrorhizon]2.3e-3137.14Show/hide
Query:  HVVALAKSNRYGHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYAIEEVREALISPLIQDVENLSMHPFGNYVIQFMIILDGENLG
        H+      N  GH ++ HC   F+ + N+ IL  +  +C EI  D++GCC+LQ C+++A  + RE L+  + ++   LS + +GNYV+Q+++ L    + 
Subjt:  HVVALAKSNRYGHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYAIEEVREALISPLIQDVENLSMHPFGNYVIQFMIILDGENLG

Query:  ARIIKKLKNKFLRLCLNKCGSNVVEKCLLCCDQAYVDEIILEIMDNDYNQLQLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFHPYGKHVTA
          ++  LKN F+ L +NK GSNVVEKCL   D   +D+IILEI+ ++   L +  + YGN+V Q AL +A+G   + +IR I+NH   L  HP+GK V A
Subjt:  ARIIKKLKNKFLRLCLNKCGSNVVEKCLLCCDQAYVDEIILEIMDNDYNQLQLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFHPYGKHVTA

Query:  AVDFILKKSK
             ++K +
Subjt:  AVDFILKKSK

XP_008455521.1 PREDICTED: putative pumilio homolog 8, chloroplastic [Cucumis melo]8.8e-3658.96Show/hide
Query:  MSCHVVALAKSNRYGHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYA---IEEVREALISPLIQDVENLSMHPFGNYVIQFMIIL
        MS HV+ LAK  + GH+++  CF  FSPQ NELILLR+A+NC E+  +QAGCCILQ CI+Y+     ++RE LI+PLI+D  +LS HP+GNYVIQFMI L
Subjt:  MSCHVVALAKSNRYGHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYA---IEEVREALISPLIQDVENLSMHPFGNYVIQFMIIL

Query:  DGENLGARIIKKLKNKFLRLCLNKCGSNVVEKCL
        DG N+G R+IK+L +KF+ L ++K GSNVVEKC+
Subjt:  DGENLGARIIKKLKNKFLRLCLNKCGSNVVEKCL

XP_022148742.1 pumilio homolog 12-like [Momordica charantia]2.0e-5153.92Show/hide
Query:  MSCHVVALAKSNRYGHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYAIEEVREALISPLIQDVENLSMHPFGNYVIQFMIILDGE
        +S H VALAKS+  GH +L +CF   S Q NE+ILL IA N  E+  D+ GCCIL  CI YA   +R  L++PLIQ+  +LS H + N+VIQF+I LD  
Subjt:  MSCHVVALAKSNRYGHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYAIEEVREALISPLIQDVENLSMHPFGNYVIQFMIILDGE

Query:  NLGARIIKKLKNKFLRLCLNKCGSNVVEKCLLCCDQAYVDEIILEIMDNDYNQLQLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFHPYGKH
        N+GAR+I+ L+NKF+ LCL+K GS+VVEKCL C +      II EIM+N  N +Q+ +N+YGN+V QKAL VAKGE+YN L+RAI++ +  L+FHPYG+ 
Subjt:  NLGARIIKKLKNKFLRLCLNKCGSNVVEKCLLCCDQAYVDEIILEIMDNDYNQLQLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFHPYGKH

Query:  VTAA
        V AA
Subjt:  VTAA

XP_022725062.1 putative pumilio homolog 8, chloroplastic [Durio zibethinus]1.3e-3138.24Show/hide
Query:  YGHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYAIEEVREALISPLIQDVENLSMHPFGNYVIQFMIILDGENLGARIIKKLKNK
        +GH ++  CF KFS +  +L++  I ++C +I  D++GCC+LQ C+ +A  E R+ L++ +  +   LS HP+GNYV+Q+++ +   ++ + II  L   
Subjt:  YGHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYAIEEVREALISPLIQDVENLSMHPFGNYVIQFMIILDGENLGARIIKKLKNK

Query:  FLRLCLNKCGSNVVEKCLLCCDQAYVDEIILEIMDNDYNQLQLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFHPYGKHVTAAVDFILKKSK
        ++ L +NK GSNVVEKCL    + +   II EIM +D + L++  + YGN+VVQ AL V+KG+ +N L+  I+ H   L  H +GK V A   +  +K++
Subjt:  FLRLCLNKCGSNVVEKCLLCCDQAYVDEIILEIMDNDYNQLQLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFHPYGKHVTAAVDFILKKSK

Query:  LRVY
        LR+Y
Subjt:  LRVY

TrEMBL top hitse value%identityAlignment
A0A0A0K7S4 PUM-HD domain-containing protein5.0e-4551.31Show/hide
Query:  ELILLRIAKNCSEIVIDQAGCCILQVCIQYA---IEEVREALISPLIQDVENLSMHPFGNYVIQFMIILDGENLGARIIKKLKNKFLRLCLNKCGSNVVE
        +LI+LR+A+NC E+   QA CCILQ CI+Y+   + +++E LISPLIQDV +LS HP+GNYVIQFMI LDG N+G RIIK+L +KF+ L ++K GSNVVE
Subjt:  ELILLRIAKNCSEIVIDQAGCCILQVCIQYA---IEEVREALISPLIQDVENLSMHPFGNYVIQFMIILDGENLGARIIKKLKNKFLRLCLNKCGSNVVE

Query:  KCLLCCDQAYVDEIILEIMDNDYNQ--LQLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFHPYGKHVTAAVDFILKKSKLRVY
        KCL CC +   ++II EI++ +     +Q+C+N+YGNFVVQ  + +AKG+    L +AI++H   LQ H YG++V +++    KK+KL  Y
Subjt:  KCLLCCDQAYVDEIILEIMDNDYNQ--LQLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFHPYGKHVTAAVDFILKKSKLRVY

A0A1R3GYZ0 PUM-HD domain-containing protein1.1e-3142.5Show/hide
Query:  VALAKSNRYGHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYAIEEVREALISPLIQDVENLSMHPFGNYVIQFMI-ILDGENLGA
        VAL K N +GH ++  C   FS +  E ++  I ++C EI  D++GCC+LQ C+    EE +E L+  +  +   LS HP+GNYV+QF++ + +  ++ A
Subjt:  VALAKSNRYGHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYAIEEVREALISPLIQDVENLSMHPFGNYVIQFMI-ILDGENLGA

Query:  RIIKKLKNKFLRLCLNKCGSNVVEKCLLCC-DQAYVDEIILEIMDNDYNQLQLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFHPYGKHVTA
         II +L+  ++ L +NK GSNVVEKCL  C D+     II EIM ND   L++  + +GN+VVQ AL V+KG+ YN LI  I+ H   L  H YGK V A
Subjt:  RIIKKLKNKFLRLCLNKCGSNVVEKCLLCC-DQAYVDEIILEIMDNDYNQLQLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFHPYGKHVTA

A0A1S3C139 putative pumilio homolog 8, chloroplastic4.3e-3658.96Show/hide
Query:  MSCHVVALAKSNRYGHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYA---IEEVREALISPLIQDVENLSMHPFGNYVIQFMIIL
        MS HV+ LAK  + GH+++  CF  FSPQ NELILLR+A+NC E+  +QAGCCILQ CI+Y+     ++RE LI+PLI+D  +LS HP+GNYVIQFMI L
Subjt:  MSCHVVALAKSNRYGHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYA---IEEVREALISPLIQDVENLSMHPFGNYVIQFMIIL

Query:  DGENLGARIIKKLKNKFLRLCLNKCGSNVVEKCL
        DG N+G R+IK+L +KF+ L ++K GSNVVEKC+
Subjt:  DGENLGARIIKKLKNKFLRLCLNKCGSNVVEKCL

A0A6J1D5W5 pumilio homolog 12-like9.5e-5253.92Show/hide
Query:  MSCHVVALAKSNRYGHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYAIEEVREALISPLIQDVENLSMHPFGNYVIQFMIILDGE
        +S H VALAKS+  GH +L +CF   S Q NE+ILL IA N  E+  D+ GCCIL  CI YA   +R  L++PLIQ+  +LS H + N+VIQF+I LD  
Subjt:  MSCHVVALAKSNRYGHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYAIEEVREALISPLIQDVENLSMHPFGNYVIQFMIILDGE

Query:  NLGARIIKKLKNKFLRLCLNKCGSNVVEKCLLCCDQAYVDEIILEIMDNDYNQLQLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFHPYGKH
        N+GAR+I+ L+NKF+ LCL+K GS+VVEKCL C +      II EIM+N  N +Q+ +N+YGN+V QKAL VAKGE+YN L+RAI++ +  L+FHPYG+ 
Subjt:  NLGARIIKKLKNKFLRLCLNKCGSNVVEKCLLCCDQAYVDEIILEIMDNDYNQLQLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFHPYGKH

Query:  VTAA
        V AA
Subjt:  VTAA

A0A6P5XBS2 putative pumilio homolog 8, chloroplastic6.4e-3238.24Show/hide
Query:  YGHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYAIEEVREALISPLIQDVENLSMHPFGNYVIQFMIILDGENLGARIIKKLKNK
        +GH ++  CF KFS +  +L++  I ++C +I  D++GCC+LQ C+ +A  E R+ L++ +  +   LS HP+GNYV+Q+++ +   ++ + II  L   
Subjt:  YGHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYAIEEVREALISPLIQDVENLSMHPFGNYVIQFMIILDGENLGARIIKKLKNK

Query:  FLRLCLNKCGSNVVEKCLLCCDQAYVDEIILEIMDNDYNQLQLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFHPYGKHVTAAVDFILKKSK
        ++ L +NK GSNVVEKCL    + +   II EIM +D + L++  + YGN+VVQ AL V+KG+ +N L+  I+ H   L  H +GK V A   +  +K++
Subjt:  FLRLCLNKCGSNVVEKCLLCCDQAYVDEIILEIMDNDYNQLQLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFHPYGKHVTAAVDFILKKSK

Query:  LRVY
        LR+Y
Subjt:  LRVY

SwissProt top hitse value%identityAlignment
P0DN95 Pumilio homolog 152.1e-1928.93Show/hide
Query:  CHVVALAKSNRYGHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYAIEEVREALISPLIQDVENLSMHPFGNYVIQFMIILDGENL
        C+V  L   +   H+++  CF +FSP     +L  I +NC ++ IDQ GCC+L+  I+ +  E+R+ LI  +I     L  + +GNYV+Q+++ L    +
Subjt:  CHVVALAKSNRYGHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYAIEEVREALISPLIQDVENLSMHPFGNYVIQFMIILDGENL

Query:  GARIIKKLKNKFLRLCLNKCGSNVVEKCLLCCDQAYVDEIILEIMDNDYNQLQLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFHPYGK
         + + K L   +++L  +K GS+VV+KCL    + +    I+  + +D + L +  + YG++V+Q A  V++    + L+  I  +   ++ + YG+
Subjt:  GARIIKKLKNKFLRLCLNKCGSNVVEKCLLCCDQAYVDEIILEIMDNDYNQLQLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFHPYGK

Q9C9R6 Putative pumilio homolog 7, chloroplastic1.4e-2333.69Show/hide
Query:  GHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYAIEEVREALISPLIQDVENLSMHPFGNYVIQFMIILDGENLGARIIKKLKNKF
        G+ ++  C    S + N+ I     K C+EI   + GCC+LQ CI Y++ + RE LI+ + ++   L+  PFGNY +QF+I L   +  A ++ +LK  +
Subjt:  GHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYAIEEVREALISPLIQDVENLSMHPFGNYVIQFMIILDGENLGARIIKKLKNKF

Query:  LRLCLNKCGSNVVEKCLLCCDQAYVDEIILEIMDNDYNQLQLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFHPYGKHV
        ++L + K  S++VE+CL+ C ++   +I+ E++   +   QL  + Y NFV+Q AL   KG  +  L+  IR H   L+ +PY K +
Subjt:  LRLCLNKCGSNVVEKCLLCCDQAYVDEIILEIMDNDYNQLQLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFHPYGKHV

Q9LDW3 Pumilio homolog 111.1e-2032.09Show/hide
Query:  GHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYAIEEVREALISPLIQDVENLSMHPFGNYVIQFMIILDGENLGARIIKKLKNKF
        G+ ++ +C   FSP  N+ IL    K C EI   + GCC+LQ C+ Y++ E  E L+  + ++   L+  PFGNY++Q+  I++ +  G  ++ +L+  +
Subjt:  GHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYAIEEVREALISPLIQDVENLSMHPFGNYVIQFMIILDGENLGARIIKKLKNKF

Query:  LRLCLNKCGSNVVEKCLLCCDQAYVDEIILEIMDNDYNQLQLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFHPYGKHV
        ++L   K GS+VVEKCL    ++   +I+ E++ +  N   L  + Y N+V+Q AL   KG     L+  +R +  +L+  PY K +
Subjt:  LRLCLNKCGSNVVEKCLLCCDQAYVDEIILEIMDNDYNQLQLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFHPYGKHV

Q9LM20 Putative pumilio homolog 8, chloroplastic2.9e-2132.09Show/hide
Query:  GHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYAIEEVREALISPLIQDVENLSMHPFGNYVIQFMIILDGENLGARIIKKLKNKF
        G+ ++  C    S + NE I     K C +I   + GCC+LQ CI Y+    RE L++ + ++   L+  P+GNY +QF++ L   +  A ++ +LK  +
Subjt:  GHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYAIEEVREALISPLIQDVENLSMHPFGNYVIQFMIILDGENLGARIIKKLKNKF

Query:  LRLCLNKCGSNVVEKCLLCCDQAYVDEIILEIMDNDYNQLQLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFHPYGKHV
        + L + K  S++VE+CL  C ++   +I+ E++   +  + L  + Y NFV+Q AL V KG  +  L+  IR H   L+ +PY K +
Subjt:  LRLCLNKCGSNVVEKCLLCCDQAYVDEIILEIMDNDYNQLQLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFHPYGKHV

Q9LVC3 Pumilio homolog 123.0e-2633Show/hide
Query:  HVVALAKSNRYGHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYAIEEVREALISPLIQDVENLSMHPFGNYVIQFMIILDGENLG
        H +     N  G+ ++  C     P   + +      +C E+  D+ GCC+LQ C+ Y+  E ++ L+S +  +   LS  PFGNYV+Q++  L  +   
Subjt:  HVVALAKSNRYGHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYAIEEVREALISPLIQDVENLSMHPFGNYVIQFMIILDGENLG

Query:  ARIIKKLKNKFLRLCLNKCGSNVVEKCLLCCDQAYVDEIILEIMDNDYNQL-QLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFHPYGKHVT
          I+++L+  +  L + KC SNVVEKCL   D  +   II E++  +Y +L Q+  + YGN+V+Q AL  +KG  +  L+ AI+ +   L+ +PYGK V 
Subjt:  ARIIKKLKNKFLRLCLNKCGSNVVEKCLLCCDQAYVDEIILEIMDNDYNQL-QLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFHPYGKHVT

Query:  AAV
        +A+
Subjt:  AAV

Arabidopsis top hitse value%identityAlignment
AT1G22240.1 pumilio 82.0e-2232.09Show/hide
Query:  GHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYAIEEVREALISPLIQDVENLSMHPFGNYVIQFMIILDGENLGARIIKKLKNKF
        G+ ++  C    S + NE I     K C +I   + GCC+LQ CI Y+    RE L++ + ++   L+  P+GNY +QF++ L   +  A ++ +LK  +
Subjt:  GHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYAIEEVREALISPLIQDVENLSMHPFGNYVIQFMIILDGENLGARIIKKLKNKF

Query:  LRLCLNKCGSNVVEKCLLCCDQAYVDEIILEIMDNDYNQLQLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFHPYGKHV
        + L + K  S++VE+CL  C ++   +I+ E++   +  + L  + Y NFV+Q AL V KG  +  L+  IR H   L+ +PY K +
Subjt:  LRLCLNKCGSNVVEKCLLCCDQAYVDEIILEIMDNDYNQLQLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFHPYGKHV

AT1G35730.1 pumilio 91.5e-2031.98Show/hide
Query:  GHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYAIEEVREALISPLIQDVENLSMHPFGNYVIQFMIILDGENLGARIIKKLKNKF
        G+ ++  C     P  NE +L    K C+EI I + GCC+LQ CI  ++   RE L++ + ++  +LS  PFGNYV+Q++I  D +    +++ + +  +
Subjt:  GHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYAIEEVREALISPLIQDVENLSMHPFGNYVIQFMIILDGENLGARIIKKLKNKF

Query:  LRLCLNKCGSNVVEKCLLCCDQAYVDEIILEIMDNDYNQLQLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFHPYGKHVTAAVDFILKK
          L   K  S+V+EKCL    ++   EI+ E++    N   L  + Y N+V+Q AL V KG     L+  +  +   L   PY K + +    ILKK
Subjt:  LRLCLNKCGSNVVEKCLLCCDQAYVDEIILEIMDNDYNQLQLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFHPYGKHVTAAVDFILKK

AT1G78160.1 pumilio 79.8e-2533.69Show/hide
Query:  GHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYAIEEVREALISPLIQDVENLSMHPFGNYVIQFMIILDGENLGARIIKKLKNKF
        G+ ++  C    S + N+ I     K C+EI   + GCC+LQ CI Y++ + RE LI+ + ++   L+  PFGNY +QF+I L   +  A ++ +LK  +
Subjt:  GHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYAIEEVREALISPLIQDVENLSMHPFGNYVIQFMIILDGENLGARIIKKLKNKF

Query:  LRLCLNKCGSNVVEKCLLCCDQAYVDEIILEIMDNDYNQLQLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFHPYGKHV
        ++L + K  S++VE+CL+ C ++   +I+ E++   +   QL  + Y NFV+Q AL   KG  +  L+  IR H   L+ +PY K +
Subjt:  LRLCLNKCGSNVVEKCLLCCDQAYVDEIILEIMDNDYNQLQLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFHPYGKHV

AT4G08840.1 pumilio 117.7e-2232.09Show/hide
Query:  GHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYAIEEVREALISPLIQDVENLSMHPFGNYVIQFMIILDGENLGARIIKKLKNKF
        G+ ++ +C   FSP  N+ IL    K C EI   + GCC+LQ C+ Y++ E  E L+  + ++   L+  PFGNY++Q+  I++ +  G  ++ +L+  +
Subjt:  GHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYAIEEVREALISPLIQDVENLSMHPFGNYVIQFMIILDGENLGARIIKKLKNKF

Query:  LRLCLNKCGSNVVEKCLLCCDQAYVDEIILEIMDNDYNQLQLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFHPYGKHV
        ++L   K GS+VVEKCL    ++   +I+ E++ +  N   L  + Y N+V+Q AL   KG     L+  +R +  +L+  PY K +
Subjt:  LRLCLNKCGSNVVEKCLLCCDQAYVDEIILEIMDNDYNQLQLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFHPYGKHV

AT5G56510.1 pumilio 122.1e-2733Show/hide
Query:  HVVALAKSNRYGHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYAIEEVREALISPLIQDVENLSMHPFGNYVIQFMIILDGENLG
        H +     N  G+ ++  C     P   + +      +C E+  D+ GCC+LQ C+ Y+  E ++ L+S +  +   LS  PFGNYV+Q++  L  +   
Subjt:  HVVALAKSNRYGHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYAIEEVREALISPLIQDVENLSMHPFGNYVIQFMIILDGENLG

Query:  ARIIKKLKNKFLRLCLNKCGSNVVEKCLLCCDQAYVDEIILEIMDNDYNQL-QLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFHPYGKHVT
          I+++L+  +  L + KC SNVVEKCL   D  +   II E++  +Y +L Q+  + YGN+V+Q AL  +KG  +  L+ AI+ +   L+ +PYGK V 
Subjt:  ARIIKKLKNKFLRLCLNKCGSNVVEKCLLCCDQAYVDEIILEIMDNDYNQL-QLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFHPYGKHVT

Query:  AAV
        +A+
Subjt:  AAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTGCCACGTTGTCGCTTTGGCTAAAAGCAATCGCTATGGTCATCAACTGCTTTACCATTGTTTCCTTAAATTTTCTCCACAAGCTAATGAGTTAATCCTCCTTAG
AATAGCAAAAAATTGCTCAGAAATTGTCATAGATCAAGCTGGATGTTGTATACTCCAAGTTTGTATTCAATATGCCATTGAAGAAGTTCGAGAAGCCCTAATATCTCCAT
TGATACAAGATGTCGAGAATCTTTCTATGCATCCTTTTGGGAACTATGTAATTCAGTTTATGATAATATTGGATGGAGAAAACCTAGGAGCAAGGATAATTAAAAAGCTA
AAGAACAAATTTTTAAGGCTTTGTTTGAATAAGTGTGGAAGCAATGTGGTGGAAAAATGCTTGCTTTGTTGTGATCAAGCTTATGTTGATGAGATTATCCTTGAAATTAT
GGATAATGATTACAATCAACTTCAACTTTGCTCAAATGAATATGGAAATTTTGTTGTTCAGAAAGCCTTATGTGTTGCCAAGGGAGAATCTTATAATTTTCTTATAAGAG
CCATTCGGAATCATCGATTTGATCTTCAATTTCATCCATATGGTAAACATGTGACAGCTGCAGTAGACTTTATTTTGAAGAAATCCAAATTGCGAGTGTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTGCCACGTTGTCGCTTTGGCTAAAAGCAATCGCTATGGTCATCAACTGCTTTACCATTGTTTCCTTAAATTTTCTCCACAAGCTAATGAGTTAATCCTCCTTAG
AATAGCAAAAAATTGCTCAGAAATTGTCATAGATCAAGCTGGATGTTGTATACTCCAAGTTTGTATTCAATATGCCATTGAAGAAGTTCGAGAAGCCCTAATATCTCCAT
TGATACAAGATGTCGAGAATCTTTCTATGCATCCTTTTGGGAACTATGTAATTCAGTTTATGATAATATTGGATGGAGAAAACCTAGGAGCAAGGATAATTAAAAAGCTA
AAGAACAAATTTTTAAGGCTTTGTTTGAATAAGTGTGGAAGCAATGTGGTGGAAAAATGCTTGCTTTGTTGTGATCAAGCTTATGTTGATGAGATTATCCTTGAAATTAT
GGATAATGATTACAATCAACTTCAACTTTGCTCAAATGAATATGGAAATTTTGTTGTTCAGAAAGCCTTATGTGTTGCCAAGGGAGAATCTTATAATTTTCTTATAAGAG
CCATTCGGAATCATCGATTTGATCTTCAATTTCATCCATATGGTAAACATGTGACAGCTGCAGTAGACTTTATTTTGAAGAAATCCAAATTGCGAGTGTATTAA
Protein sequenceShow/hide protein sequence
MSCHVVALAKSNRYGHQLLYHCFLKFSPQANELILLRIAKNCSEIVIDQAGCCILQVCIQYAIEEVREALISPLIQDVENLSMHPFGNYVIQFMIILDGENLGARIIKKL
KNKFLRLCLNKCGSNVVEKCLLCCDQAYVDEIILEIMDNDYNQLQLCSNEYGNFVVQKALCVAKGESYNFLIRAIRNHRFDLQFHPYGKHVTAAVDFILKKSKLRVY