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Sed0016516 (gene) of Chayote v1 genome

Gene IDSed0016516
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG05:36124942..36129412
RNA-Seq ExpressionSed0016516
SyntenySed0016516
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591905.1 hypothetical protein SDJN03_14251, partial [Cucurbita argyrosperma subsp. sororia]9.1e-3891.49Show/hide
Query:  MGSKENVKHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGITNCEREHAERQMKLLEAQNSAAEASVAKTESLS
        MGS+E VKHLE+CSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGI+ CEREHAERQMKLLEAQNSAAEASV ++ESLS
Subjt:  MGSKENVKHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGITNCEREHAERQMKLLEAQNSAAEASVAKTESLS

XP_022138625.1 uncharacterized protein LOC111009737 [Momordica charantia]1.6e-3791.49Show/hide
Query:  MGSKENVKHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGITNCEREHAERQMKLLEAQNSAAEASVAKTESLS
        MGS ENVKHLE+CSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGI+ CEREHAERQMKLLEAQNSAA+ASVA +ES S
Subjt:  MGSKENVKHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGITNCEREHAERQMKLLEAQNSAAEASVAKTESLS

XP_022937150.1 uncharacterized protein LOC111443534 [Cucurbita moschata]9.1e-3891.49Show/hide
Query:  MGSKENVKHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGITNCEREHAERQMKLLEAQNSAAEASVAKTESLS
        MGS+E VKHLE+CSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGI+ CEREHAERQMKLLEAQNSAAEASV ++ESLS
Subjt:  MGSKENVKHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGITNCEREHAERQMKLLEAQNSAAEASVAKTESLS

XP_022976612.1 uncharacterized protein LOC111476955 [Cucurbita maxima]1.2e-3790.43Show/hide
Query:  MGSKENVKHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGITNCEREHAERQMKLLEAQNSAAEASVAKTESLS
        MGS+E VKHLE+CSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG++ CEREHAERQMKLLEAQNSAAEASV ++ESLS
Subjt:  MGSKENVKHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGITNCEREHAERQMKLLEAQNSAAEASVAKTESLS

XP_027941423.1 uncharacterized protein LOC114195226 [Vigna unguiculata]1.6e-3791.21Show/hide
Query:  MGSKENVKHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGITNCEREHAERQMKLLEAQNSAAEASVAKTE
        MGS++NVKHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGIT CEREHAERQMKLLEAQN+AAE+S+ +TE
Subjt:  MGSKENVKHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGITNCEREHAERQMKLLEAQNSAAEASVAKTE

TrEMBL top hitse value%identityAlignment
A0A0S3RN86 Uncharacterized protein9.8e-3891.21Show/hide
Query:  MGSKENVKHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGITNCEREHAERQMKLLEAQNSAAEASVAKTE
        MGS++NVKHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGIT CEREHAERQMKLLEAQN+AAE S+ +TE
Subjt:  MGSKENVKHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGITNCEREHAERQMKLLEAQNSAAEASVAKTE

A0A4D6MG51 Uncharacterized protein7.5e-3891.21Show/hide
Query:  MGSKENVKHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGITNCEREHAERQMKLLEAQNSAAEASVAKTE
        MGS++NVKHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGIT CEREHAERQMKLLEAQN+AAE+S+ +TE
Subjt:  MGSKENVKHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGITNCEREHAERQMKLLEAQNSAAEASVAKTE

A0A6J1C9Z5 uncharacterized protein LOC1110097377.5e-3891.49Show/hide
Query:  MGSKENVKHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGITNCEREHAERQMKLLEAQNSAAEASVAKTESLS
        MGS ENVKHLE+CSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGI+ CEREHAERQMKLLEAQNSAA+ASVA +ES S
Subjt:  MGSKENVKHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGITNCEREHAERQMKLLEAQNSAAEASVAKTESLS

A0A6J1FFR1 uncharacterized protein LOC1114435344.4e-3891.49Show/hide
Query:  MGSKENVKHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGITNCEREHAERQMKLLEAQNSAAEASVAKTESLS
        MGS+E VKHLE+CSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGI+ CEREHAERQMKLLEAQNSAAEASV ++ESLS
Subjt:  MGSKENVKHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGITNCEREHAERQMKLLEAQNSAAEASVAKTESLS

A0A6J1IG79 uncharacterized protein LOC1114769555.8e-3890.43Show/hide
Query:  MGSKENVKHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGITNCEREHAERQMKLLEAQNSAAEASVAKTESLS
        MGS+E VKHLE+CSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG++ CEREHAERQMKLLEAQNSAAEASV ++ESLS
Subjt:  MGSKENVKHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGITNCEREHAERQMKLLEAQNSAAEASVAKTESLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G21930.1 unknown protein1.1e-3373.68Show/hide
Query:  MGSKENVKHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGITNCEREHAERQMKLL-EAQNSAAEASVAKTESLS
        MGS+ENVKHLE+C+VSNALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G++ CEREHAE QMKLL ++QN+    +  +TE  S
Subjt:  MGSKENVKHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGITNCEREHAERQMKLL-EAQNSAAEASVAKTESLS

AT3G42150.1 unknown protein9.4e-3372.04Show/hide
Query:  MGSKENVKHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGITNCEREHAERQMKLL-EAQNSAAEASVAKTES
        MGS++NVKHLE+C+VSNALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G++ CEREHAE Q KLL ++QN+    +   TE+
Subjt:  MGSKENVKHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGITNCEREHAERQMKLL-EAQNSAAEASVAKTES

AT3G42150.2 unknown protein9.4e-3372.04Show/hide
Query:  MGSKENVKHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGITNCEREHAERQMKLL-EAQNSAAEASVAKTES
        MGS++NVKHLE+C+VSNALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G++ CEREHAE Q KLL ++QN+    +   TE+
Subjt:  MGSKENVKHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGITNCEREHAERQMKLL-EAQNSAAEASVAKTES

AT3G42150.3 unknown protein9.4e-3372.04Show/hide
Query:  MGSKENVKHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGITNCEREHAERQMKLL-EAQNSAAEASVAKTES
        MGS++NVKHLE+C+VSNALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G++ CEREHAE Q KLL ++QN+    +   TE+
Subjt:  MGSKENVKHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGITNCEREHAERQMKLL-EAQNSAAEASVAKTES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGCAAAGAAAATGTTAAACATCTTGAGGACTGCTCAGTTTCAAATGCGTTGGGAACTTGGGTATTCTCAGTAGCTGGAGCCTTGCTAGCAATTCCAGTGGGAAT
AAAGAGGAAGTCTCTGGCCCCCCTTGTGTTTTTTGGCACAACTGGTACAATGCTTGACATTATAATGGGAATTACTAACTGCGAAAGGGAACACGCCGAGCGTCAAATGA
AGCTATTAGAAGCACAAAACTCTGCAGCCGAAGCTTCTGTTGCCAAAACCGAGTCCCTTTCTTGA
mRNA sequenceShow/hide mRNA sequence
CGACAACCAAATAATCGATCGCCCAAGCTCCGAAGTCTGTAAGGTTCTCGCCGGAGAAGTGCCGACCTCGCCGTCAACCATTTTTTAGTTGAACTTTGGTGCTGTTTCGC
ATAAGTGAATCAGTTCATTCAATCGAGGGATCGATATGGGAAGCAAAGAAAATGTTAAACATCTTGAGGACTGCTCAGTTTCAAATGCGTTGGGAACTTGGGTATTCTCA
GTAGCTGGAGCCTTGCTAGCAATTCCAGTGGGAATAAAGAGGAAGTCTCTGGCCCCCCTTGTGTTTTTTGGCACAACTGGTACAATGCTTGACATTATAATGGGAATTAC
TAACTGCGAAAGGGAACACGCCGAGCGTCAAATGAAGCTATTAGAAGCACAAAACTCTGCAGCCGAAGCTTCTGTTGCCAAAACCGAGTCCCTTTCTTGATATCGCGTTT
ACATGTTTATTTCACTCGGTCATGTCGTGCCTACCGACCTTTTCTCCCCCAACCGTGTTAGATGATGAGAATACCTTTGTGGCTTGGCCCTTGGCTGATTTCTTCAGTCT
TCTTTCAAAACACAGTGATACTGCATGAGATATGGTTTCTCAAAAAGTTATCTGATTTGTCTTTATTATTGATTTGCAATAAAATTGTACTTAGAAACCGAAATTCAATC
GTGCATTAAGCTTAAGTAAAAGACTTTGAGAATTTAGTTTCATTGTTTCCTTAAAGAAATCATCCACATACTCAGAAGTTTCCCCCTCTTGTTCTGAG
Protein sequenceShow/hide protein sequence
MGSKENVKHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGITNCEREHAERQMKLLEAQNSAAEASVAKTESLS