CuGenDBv2

Gene ID	Sed0016521
Organism	Sechium edule (Chayote v1)
Description	GTPase
Genome location	LG05:1583970..1588431
RNA-Seq Expression	Sed0016521
Synteny	Sed0016521
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6571645.1 hypothetical protein SDJN03_28373, partial [Cucurbita argyrosperma subsp. sororia]

8.8e-67

67.86

Show/hide

Query:  MVLWEIALGTAYFLGLKRTFKLALKIQRRIVSAKHPRIRLFLHRRTRAVFDVAVKAHKKVEQVDIGIGRNLGSWISGWLNRVKPSAEAHGHPNRTMEHMK
        MVLWEIAL TAYFLGLKRTFKL LK QRR+VS  HPRIR FLHRRTRA+FDV +KAH+ +E  DI +GRN+ SWIS WLNR KPSA  H HP+ T   MK
Subjt:  MVLWEIALGTAYFLGLKRTFKLALKIQRRIVSAKHPRIRLFLHRRTRAVFDVAVKAHKKVEQVDIGIGRNLGSWISGWLNRVKPSAEAHGHPNRTMEHMK

Query:  MIKQATNSYMKHRASSRATIRQKLDRCMSITSSVYRWPKPFPTIAMIMRQPKLAGTGITIQHGQYFVHGSEAMNMNYRRGRFDNIIREDIRQWMLR
        MIKQ +NSYMKHRAS+RA I QK+D+ +S TSSV+ WPK FPTIAMIMRQ K AGT    QH Q+ +  SE M  NYRRGRF++ IR+DI+QWM+R
Subjt:  MIKQATNSYMKHRASSRATIRQKLDRCMSITSSVYRWPKPFPTIAMIMRQPKLAGTGITIQHGQYFVHGSEAMNMNYRRGRFDNIIREDIRQWMLR

KAG6606267.1 hypothetical protein SDJN03_03584, partial [Cucurbita argyrosperma subsp. sororia]

2.7e-68

69.39

Show/hide

Query:  MVLWEIALGTAYFLGLKRTFKLALKIQRRIVSAKHPRIRLFLHRRTRAVFDVAVKAHKKVEQVDIGIGRNLGSWISGWLNRVKPSAEAHGHPNRTMEHMK
        MVLWEI L TAYFLGLKRTFKLA+KIQRR+VS KHPRIR FL  RTRA+FDV VK H++++  +I +G NLGSWIS  LNR+KPS E H  P   M+ MK
Subjt:  MVLWEIALGTAYFLGLKRTFKLALKIQRRIVSAKHPRIRLFLHRRTRAVFDVAVKAHKKVEQVDIGIGRNLGSWISGWLNRVKPSAEAHGHPNRTMEHMK

Query:  MIKQATNSYMKHRASSRATIRQKLDRCMSITSSVYRWPKPFPTIAMIMRQPKLAGTGITIQHGQYFVHGSEAMNMNYRRGRFDNIIREDIRQWMLR
        M+KQA++SY+KHR S RA I QK D+ MSITSSV+RWPKPFPTIAMIMRQPK AGTG  IQ+ QY + GSEA+ MNYR G F+N+IREDI QWMLR
Subjt:  MIKQATNSYMKHRASSRATIRQKLDRCMSITSSVYRWPKPFPTIAMIMRQPKLAGTGITIQHGQYFVHGSEAMNMNYRRGRFDNIIREDIRQWMLR

XP_022963557.1 uncharacterized protein LOC111463851 [Cucurbita moschata]

1.1e-66

67.86

Show/hide

Query:  MVLWEIALGTAYFLGLKRTFKLALKIQRRIVSAKHPRIRLFLHRRTRAVFDVAVKAHKKVEQVDIGIGRNLGSWISGWLNRVKPSAEAHGHPNRTMEHMK
        MVLWEIAL TAYFLGLKRTFKL LK QRR+VS  HPRIR FLHRRTRA+FDV +KAH+ +E  DI +GRN+ SWIS WLNR KPSA  H HP+ T   MK
Subjt:  MVLWEIALGTAYFLGLKRTFKLALKIQRRIVSAKHPRIRLFLHRRTRAVFDVAVKAHKKVEQVDIGIGRNLGSWISGWLNRVKPSAEAHGHPNRTMEHMK

Query:  MIKQATNSYMKHRASSRATIRQKLDRCMSITSSVYRWPKPFPTIAMIMRQPKLAGTGITIQHGQYFVHGSEAMNMNYRRGRFDNIIREDIRQWMLR
        MIKQ +NSYMKHRAS+RA I QK+D+ +S TSSV+ WPK FPTIAMIMRQ K AGT    QH Q+ +  SE M  NYRRGRF++ IR+DI+QWM+R
Subjt:  MIKQATNSYMKHRASSRATIRQKLDRCMSITSSVYRWPKPFPTIAMIMRQPKLAGTGITIQHGQYFVHGSEAMNMNYRRGRFDNIIREDIRQWMLR

XP_022995481.1 uncharacterized protein LOC111491005 [Cucurbita maxima]

4.2e-69

70.05

Show/hide

Query:  MVLWEIALGTAYFLGLKRTFKLALKIQRRIVSAKHPRIRLFLHRRTRAVFDVAVKAHKKVEQVDIGIGRNLGSWISGWLNRVKPSAEAHGHPNRTMEHMK
        MVLWEI L TAYFLGLKRTFKLA+KIQRR+VS KHPRIR FL  RTRA+FDV VK H++++  +I +G+NLGSWIS  LNR+K SAE H  P   M+ MK
Subjt:  MVLWEIALGTAYFLGLKRTFKLALKIQRRIVSAKHPRIRLFLHRRTRAVFDVAVKAHKKVEQVDIGIGRNLGSWISGWLNRVKPSAEAHGHPNRTMEHMK

Query:  MIKQATNSYMKHRASSRATIRQKLDRCMSITSSVYRWPKPFPTIAMIMRQPKLAGTGITIQHGQYFVHGSEAM-NMNYRRGRFDNIIREDIRQWMLR
        M+KQA++SY+KHR S RA I QK D+ MSITSSV+RWPKPFPTIAMIMRQPK AGTG  IQ+ QY + GSEAM  MNYRRG F+N+IREDI QWMLR
Subjt:  MIKQATNSYMKHRASSRATIRQKLDRCMSITSSVYRWPKPFPTIAMIMRQPKLAGTGITIQHGQYFVHGSEAM-NMNYRRGRFDNIIREDIRQWMLR

XP_023533976.1 uncharacterized protein LOC111795664 [Cucurbita pepo subsp. pepo]

6.1e-68

69.39

Show/hide

Query:  MVLWEIALGTAYFLGLKRTFKLALKIQRRIVSAKHPRIRLFLHRRTRAVFDVAVKAHKKVEQVDIGIGRNLGSWISGWLNRVKPSAEAHGHPNRTMEHMK
        MVLWEI L TAYFLGLKRTFK+A+KIQRR+VS KHPRIR FL  RTRA+FDV VK H++++  +I +G NLGSWIS  LNR+K SAE H  P   M+ MK
Subjt:  MVLWEIALGTAYFLGLKRTFKLALKIQRRIVSAKHPRIRLFLHRRTRAVFDVAVKAHKKVEQVDIGIGRNLGSWISGWLNRVKPSAEAHGHPNRTMEHMK

Query:  MIKQATNSYMKHRASSRATIRQKLDRCMSITSSVYRWPKPFPTIAMIMRQPKLAGTGITIQHGQYFVHGSEAMNMNYRRGRFDNIIREDIRQWMLR
        M+KQA++SY+KHR S RA I QK D+ MSITSSV+RWPKPFPTIAMIMRQPK AGTG  IQ+ QY + GSEAM MNYR G F+N+IREDI QWMLR
Subjt:  MIKQATNSYMKHRASSRATIRQKLDRCMSITSSVYRWPKPFPTIAMIMRQPKLAGTGITIQHGQYFVHGSEAMNMNYRRGRFDNIIREDIRQWMLR

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DZV3 uncharacterized protein LOC111025863 isoform X1

1.0e-65

67.86

Show/hide

Query:  MVLWEIALGTAYFLGLKRTFKLALKIQRRIVSAKHPRIRLFLHRRTRAVFDVAVKAHKKVEQVDIGIGRNLGSWISGWLNRVKPSAEAHGHPNRTMEHMK
        MVLWEI L TAYFLGLKRT+KLALKIQRR+VS KHPRIR FL  RTR++FDVAVK H+ V+  DI +G+N G+ I  WLN++KPSAE   H +  +  MK
Subjt:  MVLWEIALGTAYFLGLKRTFKLALKIQRRIVSAKHPRIRLFLHRRTRAVFDVAVKAHKKVEQVDIGIGRNLGSWISGWLNRVKPSAEAHGHPNRTMEHMK

Query:  MIKQATNSYMKHRASSRATIRQKLDRCMSITSSVYRWPKPFPTIAMIMRQPKLAGTGITIQHGQYFVHGSEAMNMNYRRGRFDNIIREDIRQWMLR
        MIKQ +NSY+KHRAS RA I QK D+ MSITSS+ RWPKPFPT AMIMRQPK AGT   IQ+ QY + GSEAM  NYRRG FD +IREDI QWMLR
Subjt:  MIKQATNSYMKHRASSRATIRQKLDRCMSITSSVYRWPKPFPTIAMIMRQPKLAGTGITIQHGQYFVHGSEAMNMNYRRGRFDNIIREDIRQWMLR

A0A6J1ET19 uncharacterized protein LOC111437317

2.8e-66

68.37

Show/hide

Query:  MVLWEIALGTAYFLGLKRTFKLALKIQRRIVSAKHPRIRLFLHRRTRAVFDVAVKAHKKVEQVDIGIGRNLGSWISGWLNRVKPSAEAHGHPNRTMEHMK
        MVLWEI L TAYFLGLKRTFKLA+KIQRR+VS KHPRIR FL  RTRA+FDV VK H++++  +  +G NLGSWIS  LNR+K SAE H  P   M+ MK
Subjt:  MVLWEIALGTAYFLGLKRTFKLALKIQRRIVSAKHPRIRLFLHRRTRAVFDVAVKAHKKVEQVDIGIGRNLGSWISGWLNRVKPSAEAHGHPNRTMEHMK

Query:  MIKQATNSYMKHRASSRATIRQKLDRCMSITSSVYRWPKPFPTIAMIMRQPKLAGTGITIQHGQYFVHGSEAMNMNYRRGRFDNIIREDIRQWMLR
        M+KQA++SY+KHR S RA I QK D+ MSITSSV+RWPKPFPTIAMIMRQPK AGTG  IQ+ QY + GSEAM MNY  G F+N+IREDI +WMLR
Subjt:  MIKQATNSYMKHRASSRATIRQKLDRCMSITSSVYRWPKPFPTIAMIMRQPKLAGTGITIQHGQYFVHGSEAMNMNYRRGRFDNIIREDIRQWMLR

A0A6J1HFJ9 uncharacterized protein LOC111463851

5.6e-67

67.86

Show/hide

Query:  MVLWEIALGTAYFLGLKRTFKLALKIQRRIVSAKHPRIRLFLHRRTRAVFDVAVKAHKKVEQVDIGIGRNLGSWISGWLNRVKPSAEAHGHPNRTMEHMK
        MVLWEIAL TAYFLGLKRTFKL LK QRR+VS  HPRIR FLHRRTRA+FDV +KAH+ +E  DI +GRN+ SWIS WLNR KPSA  H HP+ T   MK
Subjt:  MVLWEIALGTAYFLGLKRTFKLALKIQRRIVSAKHPRIRLFLHRRTRAVFDVAVKAHKKVEQVDIGIGRNLGSWISGWLNRVKPSAEAHGHPNRTMEHMK

Query:  MIKQATNSYMKHRASSRATIRQKLDRCMSITSSVYRWPKPFPTIAMIMRQPKLAGTGITIQHGQYFVHGSEAMNMNYRRGRFDNIIREDIRQWMLR
        MIKQ +NSYMKHRAS+RA I QK+D+ +S TSSV+ WPK FPTIAMIMRQ K AGT    QH Q+ +  SE M  NYRRGRF++ IR+DI+QWM+R
Subjt:  MIKQATNSYMKHRASSRATIRQKLDRCMSITSSVYRWPKPFPTIAMIMRQPKLAGTGITIQHGQYFVHGSEAMNMNYRRGRFDNIIREDIRQWMLR

A0A6J1HU73 uncharacterized protein LOC111466890

1.4e-65

66.33

Show/hide

Query:  MVLWEIALGTAYFLGLKRTFKLALKIQRRIVSAKHPRIRLFLHRRTRAVFDVAVKAHKKVEQVDIGIGRNLGSWISGWLNRVKPSAEAHGHPNRTMEHMK
        MVLWEIAL TAYFLGLKRTFKL LK QRR+VS  HPRIR FLHRRTRA+FDV +KAH+ ++  DI +G ++ SWIS WLNR+KPSA  H HP+ T   MK
Subjt:  MVLWEIALGTAYFLGLKRTFKLALKIQRRIVSAKHPRIRLFLHRRTRAVFDVAVKAHKKVEQVDIGIGRNLGSWISGWLNRVKPSAEAHGHPNRTMEHMK

Query:  MIKQATNSYMKHRASSRATIRQKLDRCMSITSSVYRWPKPFPTIAMIMRQPKLAGTGITIQHGQYFVHGSEAMNMNYRRGRFDNIIREDIRQWMLR
        MIKQ +NSYMKHRAS+RA I QK+D+ +S TSSV+RWPK FPTIAMI RQ K AGT    QH Q+ +  SE M  NYRRGRF++ IR+DI+QWM+R
Subjt:  MIKQATNSYMKHRASSRATIRQKLDRCMSITSSVYRWPKPFPTIAMIMRQPKLAGTGITIQHGQYFVHGSEAMNMNYRRGRFDNIIREDIRQWMLR

A0A6J1K213 uncharacterized protein LOC111491005

2.0e-69

70.05

Show/hide

Query:  MVLWEIALGTAYFLGLKRTFKLALKIQRRIVSAKHPRIRLFLHRRTRAVFDVAVKAHKKVEQVDIGIGRNLGSWISGWLNRVKPSAEAHGHPNRTMEHMK
        MVLWEI L TAYFLGLKRTFKLA+KIQRR+VS KHPRIR FL  RTRA+FDV VK H++++  +I +G+NLGSWIS  LNR+K SAE H  P   M+ MK
Subjt:  MVLWEIALGTAYFLGLKRTFKLALKIQRRIVSAKHPRIRLFLHRRTRAVFDVAVKAHKKVEQVDIGIGRNLGSWISGWLNRVKPSAEAHGHPNRTMEHMK

Query:  MIKQATNSYMKHRASSRATIRQKLDRCMSITSSVYRWPKPFPTIAMIMRQPKLAGTGITIQHGQYFVHGSEAM-NMNYRRGRFDNIIREDIRQWMLR
        M+KQA++SY+KHR S RA I QK D+ MSITSSV+RWPKPFPTIAMIMRQPK AGTG  IQ+ QY + GSEAM  MNYRRG F+N+IREDI QWMLR
Subjt:  MIKQATNSYMKHRASSRATIRQKLDRCMSITSSVYRWPKPFPTIAMIMRQPKLAGTGITIQHGQYFVHGSEAM-NMNYRRGRFDNIIREDIRQWMLR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G32260.1 unknown protein

1.3e-39

42.23

Show/hide

Query:  MVLWEIALGTAYFLGLKRTFKLALKIQRRIVSAKHPRIRLFLHRRTRAVFDVAVKAHKKVEQVDIGIGRNLGSWISGWLNRVKPSAEAHGHP------NR
        MV WEI LGTAYFLGL+RT++LALKIQRR+V+ KHP+IR FLHRRTR +FDVA+  HK +++ DI +GRNLG+WI  WL+++KP+A+    P      N 
Subjt:  MVLWEIALGTAYFLGLKRTFKLALKIQRRIVSAKHPRIRLFLHRRTRAVFDVAVKAHKKVEQVDIGIGRNLGSWISGWLNRVKPSAEAHGHP------NR

Query:  TMEHMKMIKQATNSYMKHRASSRATIRQKLDRCMSITSSVYRWPKPFPTIAMIMRQPKLAGTGITIQHGQYFVHGSEAMNMN---YRRGRFDNIIREDIR
         M+  K + + +     H  +++    ++ DR +  TS  +   KPFP+++M+++ P+  GT  T Q+  Y+  G  A  +       G F+ ++R+DI 
Subjt:  TMEHMKMIKQATNSYMKHRASSRATIRQKLDRCMSITSSVYRWPKPFPTIAMIMRQPKLAGTGITIQHGQYFVHGSEAMNMN---YRRGRFDNIIREDIR

Query:  QWMLRK
        QWM ++
Subjt:  QWMLRK

AT2G35480.1 unknown protein

2.8e-39

44.22

Show/hide

Query:  MVLWEIALGTAYFLGLKRTFKLALKIQRRIVSAKHPRIRLFLHRRTRAVFDVAVKAHKKVEQVDIGIGRNLGSWISGWLNRVKPSAEAHGHPNR--TMEH
        MVLWE+ALGTAYFLG++RT++LALK QRR+VS KHPRIR F+HRRT  +FD+A++ HK ++Q D+ IGRNLG+WI   L+R+KPSA+     N   +++ 
Subjt:  MVLWEIALGTAYFLGLKRTFKLALKIQRRIVSAKHPRIRLFLHRRTRAVFDVAVKAHKKVEQVDIGIGRNLGSWISGWLNRVKPSAEAHGHPNR--TMEH

Query:  MKMIKQATNSYMKHRASSRATIRQKLDRCMSITSSVYRWPKPFPTIAMIMRQPKLAGTGITIQHGQYFVHGSEAMNMNYRRGRFDNIIREDIRQWMLRK
         K + Q+T   +K   +++    +++DR  ++  S+  +   +P  +M+M +P    TG T Q+  Y V  S  +   Y RG F+++IR+DI QWM++K
Subjt:  MKMIKQATNSYMKHRASSRATIRQKLDRCMSITSSVYRWPKPFPTIAMIMRQPKLAGTGITIQHGQYFVHGSEAMNMNYRRGRFDNIIREDIRQWMLRK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTGTTATGGGAGATTGCATTGGGAACAGCGTATTTCTTGGGGCTGAAGCGAACTTTCAAGCTCGCTTTGAAGATTCAGCGCCGTATTGTTTCCGCCAAGCACCCACG
GATTCGTCTTTTTCTTCACAGGCGTACACGTGCTGTATTTGATGTTGCTGTAAAAGCTCATAAAAAAGTTGAGCAAGTAGACATAGGCATTGGTAGGAATCTCGGTAGCT
GGATTTCGGGATGGCTTAATCGAGTGAAACCATCTGCCGAGGCTCATGGACATCCCAATCGCACTATGGAACACATGAAAATGATAAAACAGGCTACCAACTCCTACATG
AAACATCGAGCCAGTTCTCGAGCGACGATTAGACAGAAGCTCGATCGATGTATGTCCATTACCTCATCAGTATACAGATGGCCTAAGCCCTTTCCTACTATTGCAATGAT
CATGAGGCAGCCAAAGCTTGCTGGGACTGGGATTACGATTCAACACGGACAATATTTCGTTCATGGCTCCGAAGCAATGAATATGAATTACAGAAGAGGACGTTTCGACA
ACATTATTCGAGAAGATATTCGGCAGTGGATGCTCCGAAAATAG

mRNA sequence

Show/hide mRNA sequence

CAGAAACAAAGCGAGGAAAAAAAATGGTGTTATGGGAGATTGCATTGGGAACAGCGTATTTCTTGGGGCTGAAGCGAACTTTCAAGCTCGCTTTGAAGATTCAGCGCCGT
ATTGTTTCCGCCAAGCACCCACGGATTCGTCTTTTTCTTCACAGGCGTACACGTGCTGTATTTGATGTTGCTGTAAAAGCTCATAAAAAAGTTGAGCAAGTAGACATAGG
CATTGGTAGGAATCTCGGTAGCTGGATTTCGGGATGGCTTAATCGAGTGAAACCATCTGCCGAGGCTCATGGACATCCCAATCGCACTATGGAACACATGAAAATGATAA
AACAGGCTACCAACTCCTACATGAAACATCGAGCCAGTTCTCGAGCGACGATTAGACAGAAGCTCGATCGATGTATGTCCATTACCTCATCAGTATACAGATGGCCTAAG
CCCTTTCCTACTATTGCAATGATCATGAGGCAGCCAAAGCTTGCTGGGACTGGGATTACGATTCAACACGGACAATATTTCGTTCATGGCTCCGAAGCAATGAATATGAA
TTACAGAAGAGGACGTTTCGACAACATTATTCGAGAAGATATTCGGCAGTGGATGCTCCGAAAATAGAAGGGAAGATGTTTTCTAGCTGTCTTCTCCTTGAAGACTTGAT
TTTTTGGCTGATAATACATCCTTTTGTGCAGTGCTTGGTTTCCAATATAGAGTTTGGGGACAATATAGAGGTTTTATTTTCTTGTAGTGTACTGTTTTGAACATGTTTTT
GGTGAAGGAAGAAGCAATTTATCTATTTATCCCTTAACCCC

Protein sequence

Show/hide protein sequence

MVLWEIALGTAYFLGLKRTFKLALKIQRRIVSAKHPRIRLFLHRRTRAVFDVAVKAHKKVEQVDIGIGRNLGSWISGWLNRVKPSAEAHGHPNRTMEHMKMIKQATNSYM
KHRASSRATIRQKLDRCMSITSSVYRWPKPFPTIAMIMRQPKLAGTGITIQHGQYFVHGSEAMNMNYRRGRFDNIIREDIRQWMLRK

Sed0016521 (gene) of Chayote v1 genome