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Sed0016523 (gene) of Chayote v1 genome

Gene IDSed0016523
OrganismSechium edule (Chayote v1)
DescriptionLow-density receptor-like protein
Genome locationLG04:33075663..33076944
RNA-Seq ExpressionSed0016523
SyntenySed0016523
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593936.1 hypothetical protein SDJN03_13412, partial [Cucurbita argyrosperma subsp. sororia]3.5e-3787.37Show/hide
Query:  MASSTARVTFRVVMVVAIFLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGLLYGTDAKKAGSVASRRLLHQVS
        MASS AR+TFRVVMVV + LV+FYVGRPLYWKISATVHDIRQNKQTVKEG SQIVLEAQKSVGWYHDESDSG+  GTD KKAGSVA+RRLLHQVS
Subjt:  MASSTARVTFRVVMVVAIFLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGLLYGTDAKKAGSVASRRLLHQVS
XP_008458514.1 PREDICTED: uncharacterized protein LOC103497900 isoform X1 [Cucumis melo]1.3e-3687.23Show/hide
Query:  MASSTARVTFRVVMVVAIFLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGLLYGTDAKKAGSVASRRLLHQV
        MASSTA++TFRV+MVV + LVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSG+  G D KKAGSVA RRLLHQV
Subjt:  MASSTARVTFRVVMVVAIFLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGLLYGTDAKKAGSVASRRLLHQV
XP_022930336.1 uncharacterized protein LOC111436812 isoform X1 [Cucurbita moschata]2.3e-3686.17Show/hide
Query:  MASSTARVTFRVVMVVAIFLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGLLYGTDAKKAGSVASRRLLHQV
        MASS AR+TFRVVMVV + LV+FYVGRPLYWKISATVHDIRQNKQTVKEG SQIVLEAQKSVGWYHDESDSG+  GTD KKAGSVA+RRLLHQ+
Subjt:  MASSTARVTFRVVMVVAIFLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGLLYGTDAKKAGSVASRRLLHQV
XP_022930338.1 uncharacterized protein LOC111436812 isoform X3 [Cucurbita moschata]1.3e-3686.17Show/hide
Query:  MASSTARVTFRVVMVVAIFLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGLLYGTDAKKAGSVASRRLLHQV
        MASS AR+TFRVVMVV + LV+FYVGRPLYWKISATVHDIRQNKQTVKEG SQIVLEAQKSVGWYHDESDSG+  GTD KKAGSVA+RRLLHQ+
Subjt:  MASSTARVTFRVVMVVAIFLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGLLYGTDAKKAGSVASRRLLHQV
XP_022930340.1 uncharacterized protein LOC111436812 isoform X5 [Cucurbita moschata]1.7e-3685.26Show/hide
Query:  MASSTARVTFRVVMVVAIFLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGLLYGTDAKKAGSVASRRLLHQVS
        MASS AR+TFRVVMVV + LV+FYVGRPLYWKISATVHDIRQNKQTVKEG SQIVLEAQKSVGWYHDESDSG+  GTD KKAGSVA+RRLLHQ++
Subjt:  MASSTARVTFRVVMVVAIFLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGLLYGTDAKKAGSVASRRLLHQVS
TrEMBL top hitse value%identityAlignment
A0A1S3C994 uncharacterized protein LOC103497900 isoform X16.4e-3787.23Show/hide
Query:  MASSTARVTFRVVMVVAIFLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGLLYGTDAKKAGSVASRRLLHQV
        MASSTA++TFRV+MVV + LVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSG+  G D KKAGSVA RRLLHQV
Subjt:  MASSTARVTFRVVMVVAIFLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGLLYGTDAKKAGSVASRRLLHQV
A0A6J1EQN0 uncharacterized protein LOC111436812 isoform X11.1e-3686.17Show/hide
Query:  MASSTARVTFRVVMVVAIFLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGLLYGTDAKKAGSVASRRLLHQV
        MASS AR+TFRVVMVV + LV+FYVGRPLYWKISATVHDIRQNKQTVKEG SQIVLEAQKSVGWYHDESDSG+  GTD KKAGSVA+RRLLHQ+
Subjt:  MASSTARVTFRVVMVVAIFLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGLLYGTDAKKAGSVASRRLLHQV
A0A6J1ER65 uncharacterized protein LOC111436812 isoform X41.4e-3687.1Show/hide
Query:  MASSTARVTFRVVMVVAIFLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGLLYGTDAKKAGSVASRRLLHQ
        MASS AR+TFRVVMVV + LV+FYVGRPLYWKISATVHDIRQNKQTVKEG SQIVLEAQKSVGWYHDESDSG+  GTD KKAGSVA+RRLLHQ
Subjt:  MASSTARVTFRVVMVVAIFLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGLLYGTDAKKAGSVASRRLLHQ
A0A6J1EUV5 uncharacterized protein LOC111436812 isoform X36.4e-3786.17Show/hide
Query:  MASSTARVTFRVVMVVAIFLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGLLYGTDAKKAGSVASRRLLHQV
        MASS AR+TFRVVMVV + LV+FYVGRPLYWKISATVHDIRQNKQTVKEG SQIVLEAQKSVGWYHDESDSG+  GTD KKAGSVA+RRLLHQ+
Subjt:  MASSTARVTFRVVMVVAIFLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGLLYGTDAKKAGSVASRRLLHQV
A0A6J1EWN5 uncharacterized protein LOC111436812 isoform X58.4e-3785.26Show/hide
Query:  MASSTARVTFRVVMVVAIFLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGLLYGTDAKKAGSVASRRLLHQVS
        MASS AR+TFRVVMVV + LV+FYVGRPLYWKISATVHDIRQNKQTVKEG SQIVLEAQKSVGWYHDESDSG+  GTD KKAGSVA+RRLLHQ++
Subjt:  MASSTARVTFRVVMVVAIFLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGLLYGTDAKKAGSVASRRLLHQVS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G18850.1 unknown protein6.4e-2967.78Show/hide
Query:  ASSTARVTFRVVMVVAIFLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGLLYGTDAKKAGSVASRRLL
        +S T R+ FR V+++A+ +VLFYVGRPLYWKISAT+HDIR NKQ+V+EG+SQIV EAQ+SVGWYHDESDSG   G + KK+G   SRRLL
Subjt:  ASSTARVTFRVVMVVAIFLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGLLYGTDAKKAGSVASRRLL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGTCGACGGCTAGGGTTACGTTTCGCGTTGTCATGGTGGTGGCCATCTTCCTCGTCCTTTTCTACGTCGGCCGTCCGCTGTACTGGAAGATTTCCGCCACTGT
TCATGACATTCGCCAGAACAAACAGACCGTCAAAGAAGGTCTCTCTCAGATCGTTCTGGAAGCTCAGAAATCGGTGGGATGGTACCACGACGAGTCGGACTCTGGCCTAC
TTTATGGAACCGACGCAAAGAAGGCTGGATCTGTTGCTTCTCGGAGGCTGCTTCATCAGGTTTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATTAAAATGAAAAAGATCTATAAATAAATATCGAGGGGAAGTCCCAGAGGTTTACTTCTTATTTCCAGATCGAAAAATTTCAACTCAGAATCTCTGAGCTCTGATTGTTT
CTCTCTGCAAGAGAAATTCACCGGAAACAATGGCGTCGTCGACGGCTAGGGTTACGTTTCGCGTTGTCATGGTGGTGGCCATCTTCCTCGTCCTTTTCTACGTCGGCCGT
CCGCTGTACTGGAAGATTTCCGCCACTGTTCATGACATTCGCCAGAACAAACAGACCGTCAAAGAAGGTCTCTCTCAGATCGTTCTGGAAGCTCAGAAATCGGTGGGATG
GTACCACGACGAGTCGGACTCTGGCCTACTTTATGGAACCGACGCAAAGAAGGCTGGATCTGTTGCTTCTCGGAGGCTGCTTCATCAGGTTTCGTGAAAATCTCTCAGTT
ATTTGAATTGTGATTAGTCGATGTGAATTGAATGGTTTCATATGCATAAGCAAGGTTTAATCACCGGATCTGGATTCTTTTTGCCCTAATAACGTGTTATAATGACTGAA
TTAAAAAGTAAAGAAATCGATAATGCTTCATCGTTTAGCCTTTAGTGTTGCCATTATGAATTGTAGGCAATCGGATGTTGTGTATAGTGATAATTCTGAACTACTACTTC
TGAATTACAGAATTAGATACTGCTAGTTTTTAACCTTTGCCTTCCCAATGAACAAGTCCAGATATGTATCTTGAATGAGCGAAGTTGGCTGATATTGTGAATGAGAATTT
CTAGTTCATCAAGATTTATTTTGTAGAGGTCGATAAGATTCTAAAAAAAACTAGAAAGGGCAGCAGTTTTTGTAACAATAACTTGAAAGTTGGACATTCTAGTGCTGAAT
AAGCTATTTCGAACGAAATCAGTCAATTGAAGTACAATGGACAAAGCTTCAATAAGCTAATGATATCTCAGGCACCTGCATTCAAAACTTTCCTTGTTTTATAAGCTAAT
TTTATTCAACATCGCATGTATATTGATGAGGAGCCCTACAGGAAAATCTTGATTTTGTTTAAATAACAATACATTTTTTTCGAAACCGGAAAATGGGAGCTTTGCTCGAC
TATACCTAGGGTAACCACGTCTGTCCCTAGGCCTGGGATTGGGAGATATTGAAGGAATGAAGACACAGGAGGTGTCTACAAATTAATGTGAG
Protein sequenceShow/hide protein sequence
MASSTARVTFRVVMVVAIFLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGLLYGTDAKKAGSVASRRLLHQVS