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Sed0016537 (gene) of Chayote v1 genome

Gene IDSed0016537
OrganismSechium edule (Chayote v1)
DescriptionChromosome transmission fidelity protein
Genome locationLG05:33020818..33021024
RNA-Seq ExpressionSed0016537
SyntenySed0016537
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN43586.1 hypothetical protein Csa_020149 [Cucumis sativus]3.5e-3195.59Show/hide
Query:  MVCFCFLVDQTRQVRRSKPAAGSCSRCGGGASVADIKTATRFCYVPFYWRSWRAIICTFCGAIIRSYR
        MVCFCFLVDQTRQVRRSKPAAG CSRCGGGASVAD+KTATRFC+VPFYWRSWRAIICTFCGAIIRSYR
Subjt:  MVCFCFLVDQTRQVRRSKPAAGSCSRCGGGASVADIKTATRFCYVPFYWRSWRAIICTFCGAIIRSYR

XP_008455347.1 PREDICTED: uncharacterized protein LOC103495535 [Cucumis melo]4.6e-3194.12Show/hide
Query:  MVCFCFLVDQTRQVRRSKPAAGSCSRCGGGASVADIKTATRFCYVPFYWRSWRAIICTFCGAIIRSYR
        MVCFCFLVDQTRQ+RRSKPAAG CSRCGGGASVAD+KTATRFC+VPFYWRSWRAIICTFCGAIIRSYR
Subjt:  MVCFCFLVDQTRQVRRSKPAAGSCSRCGGGASVADIKTATRFCYVPFYWRSWRAIICTFCGAIIRSYR

XP_022952305.1 uncharacterized protein LOC111455022 [Cucurbita moschata]1.3e-3095.59Show/hide
Query:  MVCFCFLVDQTRQVRRSKPAAGSCSRCGGGASVADIKTATRFCYVPFYWRSWRAIICTFCGAIIRSYR
        MVCFCFLVDQTRQVRRSKPAAG CSRCGGGASVAD+KTATRFC VPFYWRSWRAIICTFCGAIIRSYR
Subjt:  MVCFCFLVDQTRQVRRSKPAAGSCSRCGGGASVADIKTATRFCYVPFYWRSWRAIICTFCGAIIRSYR

XP_031744911.1 uncharacterized protein LOC101203862 [Cucumis sativus]3.5e-3195.59Show/hide
Query:  MVCFCFLVDQTRQVRRSKPAAGSCSRCGGGASVADIKTATRFCYVPFYWRSWRAIICTFCGAIIRSYR
        MVCFCFLVDQTRQVRRSKPAAG CSRCGGGASVAD+KTATRFC+VPFYWRSWRAIICTFCGAIIRSYR
Subjt:  MVCFCFLVDQTRQVRRSKPAAGSCSRCGGGASVADIKTATRFCYVPFYWRSWRAIICTFCGAIIRSYR

XP_038888489.1 uncharacterized protein LOC120078322 [Benincasa hispida]1.3e-3094.12Show/hide
Query:  MVCFCFLVDQTRQVRRSKPAAGSCSRCGGGASVADIKTATRFCYVPFYWRSWRAIICTFCGAIIRSYR
        MVCFCFL DQTRQVRRSKPAAG CSRCGGGASVAD+KTATRFC+VPFYWRSWRAIICTFCGAIIRSYR
Subjt:  MVCFCFLVDQTRQVRRSKPAAGSCSRCGGGASVADIKTATRFCYVPFYWRSWRAIICTFCGAIIRSYR

TrEMBL top hitse value%identityAlignment
A0A0A0K6Z7 Uncharacterized protein1.7e-3195.59Show/hide
Query:  MVCFCFLVDQTRQVRRSKPAAGSCSRCGGGASVADIKTATRFCYVPFYWRSWRAIICTFCGAIIRSYR
        MVCFCFLVDQTRQVRRSKPAAG CSRCGGGASVAD+KTATRFC+VPFYWRSWRAIICTFCGAIIRSYR
Subjt:  MVCFCFLVDQTRQVRRSKPAAGSCSRCGGGASVADIKTATRFCYVPFYWRSWRAIICTFCGAIIRSYR

A0A1S3C0P7 uncharacterized protein LOC1034955352.2e-3194.12Show/hide
Query:  MVCFCFLVDQTRQVRRSKPAAGSCSRCGGGASVADIKTATRFCYVPFYWRSWRAIICTFCGAIIRSYR
        MVCFCFLVDQTRQ+RRSKPAAG CSRCGGGASVAD+KTATRFC+VPFYWRSWRAIICTFCGAIIRSYR
Subjt:  MVCFCFLVDQTRQVRRSKPAAGSCSRCGGGASVADIKTATRFCYVPFYWRSWRAIICTFCGAIIRSYR

A0A2Z7BCJ0 Uncharacterized protein6.4e-3191.18Show/hide
Query:  MVCFCFLVDQTRQVRRSKPAAGSCSRCGGGASVADIKTATRFCYVPFYWRSWRAIICTFCGAIIRSYR
        MVCFCFLVDQTRQVR+SKPAAG+CSRCGGG SVAD+KTATRFCYVPFYWR+WRAIICTFCGAI+RSYR
Subjt:  MVCFCFLVDQTRQVRRSKPAAGSCSRCGGGASVADIKTATRFCYVPFYWRSWRAIICTFCGAIIRSYR

A0A6J1GLE1 uncharacterized protein LOC1114550226.4e-3195.59Show/hide
Query:  MVCFCFLVDQTRQVRRSKPAAGSCSRCGGGASVADIKTATRFCYVPFYWRSWRAIICTFCGAIIRSYR
        MVCFCFLVDQTRQVRRSKPAAG CSRCGGGASVAD+KTATRFC VPFYWRSWRAIICTFCGAIIRSYR
Subjt:  MVCFCFLVDQTRQVRRSKPAAGSCSRCGGGASVADIKTATRFCYVPFYWRSWRAIICTFCGAIIRSYR

A0A6J1HW11 uncharacterized protein LOC1114683606.4e-3195.59Show/hide
Query:  MVCFCFLVDQTRQVRRSKPAAGSCSRCGGGASVADIKTATRFCYVPFYWRSWRAIICTFCGAIIRSYR
        MVCFCFLVDQTRQVRRSKPAAG CSRCGGGASVAD+KTATRFC VPFYWRSWRAIICTFCGAIIRSYR
Subjt:  MVCFCFLVDQTRQVRRSKPAAGSCSRCGGGASVADIKTATRFCYVPFYWRSWRAIICTFCGAIIRSYR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52855.1 unknown protein9.2e-3073.53Show/hide
Query:  MVCFCFLVDQTRQVRRSKPAAGSCSRCGGGASVADIKTATRFCYVPFYWRSWRAIICTFCGAIIRSYR
        MVCFCFLVDQTR+V+RSKPAAG+CSRCG  AS+AD+KT+TRFC++P YWRSWRA++C+FCG++++SYR
Subjt:  MVCFCFLVDQTRQVRRSKPAAGSCSRCGGGASVADIKTATRFCYVPFYWRSWRAIICTFCGAIIRSYR

AT2G20835.1 unknown protein4.9e-2365.67Show/hide
Query:  MVCFCFLVDQTRQVRRSKPAAGSCSRCGGGASVADIKTATRFCYVPFYWRSWRAIICTFCGAIIRSY
        M  FCFLVDQ ++VR  KPAAG CSRCGGGA VAD++T+TRFC VPFY ++W+AI+C  CGA+++SY
Subjt:  MVCFCFLVDQTRQVRRSKPAAGSCSRCGGGASVADIKTATRFCYVPFYWRSWRAIICTFCGAIIRSY

AT3G15534.1 unknown protein5.6e-2772.06Show/hide
Query:  MVCFCFLVDQTRQVRRSKPAAGSCSRCGGGASVADIKTATRFCYVPFYWRSWRAIICTFCGAIIRSYR
        MVCFCFLVDQ R+V+ SKPAAG+CSRCG GA VAD+KT+TRFC +P Y RSWRAI+C+FCG++++SYR
Subjt:  MVCFCFLVDQTRQVRRSKPAAGSCSRCGGGASVADIKTATRFCYVPFYWRSWRAIICTFCGAIIRSYR

AT5G10695.1 unknown protein1.7e-0738.33Show/hide
Query:  VCFCFLVDQTRQVRRSKPAAGSCSRCGGGASVADIKTATRFCYVPFYWRSWRAIICTFCG
        +C  F+ DQ  +V     A G+C  CGG   V D+ +  RFC+VP   +S R  +C+ CG
Subjt:  VCFCFLVDQTRQVRRSKPAAGSCSRCGGGASVADIKTATRFCYVPFYWRSWRAIICTFCG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTGCTTTTGCTTTTTGGTGGATCAGACCCGTCAGGTGCGGCGGAGCAAACCGGCGGCCGGATCCTGTTCCCGGTGCGGCGGCGGAGCCAGCGTCGCCGACATCAA
AACCGCCACCAGATTCTGTTACGTCCCGTTTTATTGGAGATCTTGGAGAGCCATTATTTGTACTTTTTGTGGAGCTATTATCAGATCTTATCGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTGCTTTTGCTTTTTGGTGGATCAGACCCGTCAGGTGCGGCGGAGCAAACCGGCGGCCGGATCCTGTTCCCGGTGCGGCGGCGGAGCCAGCGTCGCCGACATCAA
AACCGCCACCAGATTCTGTTACGTCCCGTTTTATTGGAGATCTTGGAGAGCCATTATTTGTACTTTTTGTGGAGCTATTATCAGATCTTATCGCTAA
Protein sequenceShow/hide protein sequence
MVCFCFLVDQTRQVRRSKPAAGSCSRCGGGASVADIKTATRFCYVPFYWRSWRAIICTFCGAIIRSYR