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Sed0016541 (gene) of Chayote v1 genome

Gene IDSed0016541
OrganismSechium edule (Chayote v1)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages;
Genome locationLG10:2720024..2730852
RNA-Seq ExpressionSed0016541
SyntenySed0016541
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022133053.1 uncharacterized protein LOC111005740 isoform X2 [Momordica charantia]1.9e-3788.51Show/hide
Query:  MDDRKEKNAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASVAPPTTANSFHTENHHPYHESHHPPP
        MDDRKEK APWLSVPQFGDWDQKG +PDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAS  PPT  +SF TENHHPYH+SHHPPP
Subjt:  MDDRKEKNAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASVAPPTTANSFHTENHHPYHESHHPPP

XP_022950290.1 uncharacterized protein LOC111453422 [Cucurbita moschata]1.7e-3890.8Show/hide
Query:  MDDRKEKNAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASVAPPTTANSFHTENHHPYHESHHPPP
        MDDRKEK APWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRD+SRASLGNEEELIAS APPTT NSF T+NHHPYH+SHH PP
Subjt:  MDDRKEKNAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASVAPPTTANSFHTENHHPYHESHHPPP

XP_022977957.1 uncharacterized protein LOC111478092 [Cucurbita maxima]3.0e-3890.8Show/hide
Query:  MDDRKEKNAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASVAPPTTANSFHTENHHPYHESHHPPP
        MDDRKEK APWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAS APPTT +SF T+NHHPYH+SHH PP
Subjt:  MDDRKEKNAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASVAPPTTANSFHTENHHPYHESHHPPP

XP_023545041.1 uncharacterized protein LOC111804467 [Cucurbita pepo subsp. pepo]7.8e-3991.95Show/hide
Query:  MDDRKEKNAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASVAPPTTANSFHTENHHPYHESHHPPP
        MDDRKEK APWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAS APPTT NSF T+NHHPYH+SHH PP
Subjt:  MDDRKEKNAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASVAPPTTANSFHTENHHPYHESHHPPP

XP_038881128.1 uncharacterized protein LOC120072730 [Benincasa hispida]1.5e-3787.36Show/hide
Query:  MDDRKEKNAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASVAPPTTANSFHTENHHPYHESHHPPP
        MDDRKEK APWLSVPQFGDWDQKGQ+PDYSLDFSK+RENRKQNKR+VSRASLGNEEELI S APPTT  SF T+NHHPYH+SHHPPP
Subjt:  MDDRKEKNAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASVAPPTTANSFHTENHHPYHESHHPPP

TrEMBL top hitse value%identityAlignment
A0A1S3B0G0 uncharacterized protein LOC103484698 isoform X24.6e-3787.5Show/hide
Query:  MDDRKEKNAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASVAPPTTANSFHTENHHPY-HESHHPPP
        MDDRKEK APWLSVPQFGDWDQKGQ+PDYSLDFSK+RENRKQNKRDVSRASLGNEEELIA  APPTT +SF T+NHHPY H+SHHPPP
Subjt:  MDDRKEKNAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASVAPPTTANSFHTENHHPY-HESHHPPP

A0A6J1BVJ2 uncharacterized protein LOC111005740 isoform X19.3e-3888.51Show/hide
Query:  MDDRKEKNAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASVAPPTTANSFHTENHHPYHESHHPPP
        MDDRKEK APWLSVPQFGDWDQKG +PDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAS  PPT  +SF TENHHPYH+SHHPPP
Subjt:  MDDRKEKNAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASVAPPTTANSFHTENHHPYHESHHPPP

A0A6J1BXX7 uncharacterized protein LOC111005740 isoform X29.3e-3888.51Show/hide
Query:  MDDRKEKNAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASVAPPTTANSFHTENHHPYHESHHPPP
        MDDRKEK APWLSVPQFGDWDQKG +PDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAS  PPT  +SF TENHHPYH+SHHPPP
Subjt:  MDDRKEKNAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASVAPPTTANSFHTENHHPYHESHHPPP

A0A6J1GFA9 uncharacterized protein LOC1114534228.4e-3990.8Show/hide
Query:  MDDRKEKNAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASVAPPTTANSFHTENHHPYHESHHPPP
        MDDRKEK APWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRD+SRASLGNEEELIAS APPTT NSF T+NHHPYH+SHH PP
Subjt:  MDDRKEKNAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASVAPPTTANSFHTENHHPYHESHHPPP

A0A6J1IJV1 uncharacterized protein LOC1114780921.4e-3890.8Show/hide
Query:  MDDRKEKNAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASVAPPTTANSFHTENHHPYHESHHPPP
        MDDRKEK APWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAS APPTT +SF T+NHHPYH+SHH PP
Subjt:  MDDRKEKNAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASVAPPTTANSFHTENHHPYHESHHPPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G09960.1 FUNCTIONS IN: molecular_function unknown4.0e-2565.96Show/hide
Query:  DDRKEKNAPWLSVPQFGDWDQK--GQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASVAPPTTANS------FHTENHHPYHESHHPPP
        DDRKEKN PWLSVPQFGDWDQK  G MPDYS+DF+KIRE RKQNKRD SRASLGNEEELI    PP +A S        +EN   +  SHH  P
Subjt:  DDRKEKNAPWLSVPQFGDWDQK--GQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASVAPPTTANS------FHTENHHPYHESHHPPP

AT5G19473.1 RPM1-interacting protein 4 (RIN4) family protein1.7e-1246.99Show/hide
Query:  DRKEKNAPWLSVPQFGDWDQKG--QMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASVAPPTTANSFHTENHHPYHESH
        D++ +NA W  VPQFG WDQKG     +YS+ FSK R NRKQNK  V  +SLG+E+EL+ SV            NH   H  H
Subjt:  DRKEKNAPWLSVPQFGDWDQKG--QMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASVAPPTTANSFHTENHHPYHESH

AT5G64850.1 FUNCTIONS IN: molecular_function unknown2.2e-2361.05Show/hide
Query:  MDDRKE-KNAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELI--------ASVAPPTTANSFHTENHHPYHESHHPP
        M+DRKE KN+PWLSVPQFGDWDQKG   DYS+DFSKIRE RK NKRD SRASLGNEEELI           A P    + H++N++    SHH P
Subjt:  MDDRKE-KNAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELI--------ASVAPPTTANSFHTENHHPYHESHHPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATCGTAAGGAGAAAAATGCTCCCTGGCTTTCAGTGCCACAGTTTGGAGATTGGGACCAGAAGGGACAGATGCCTGACTACTCTCTTGATTTCTCAAAAATAAG
GGAAAATAGGAAACAAAACAAGAGAGATGTGTCTCGGGCGAGTCTTGGAAACGAAGAGGAGCTCATCGCCTCAGTCGCTCCCCCAACCACAGCAAACTCTTTCCACACTG
AAAATCATCACCCCTATCACGAGAGTCATCATCCTCCACCAGGACTTGCATGTTCTTATAAACTCACATCGTTTGGACAACTCAAGAATATTGGTTGGGTTGGGTTACAT
CAATGTGTTGGTATGTGCCTGGAAGGTTGTTCATCATTAAACTTGTGGGTCATGCTGCTTGCTAAGTGCTATTATCTATTAAACTTGTGGGTACAGCTATCAATTGTGGA
TAATTCAAAACAAACCTAA
mRNA sequenceShow/hide mRNA sequence
ATTAATACTCGTTTCCCAACGCACTTTCTTTGCTTTGCTTTTTCGCTCTCAACGCTCTTCGCAGAGTAAACAAAAACTCCAACTCTCTGCTGCTCGATTCGTCTTCTTCG
CTGTGCTGTAAAGTGAGGATTTGCAGTTGCTGCCATGGATGATCGTAAGGAGAAAAATGCTCCCTGGCTTTCAGTGCCACAGTTTGGAGATTGGGACCAGAAGGGACAGA
TGCCTGACTACTCTCTTGATTTCTCAAAAATAAGGGAAAATAGGAAACAAAACAAGAGAGATGTGTCTCGGGCGAGTCTTGGAAACGAAGAGGAGCTCATCGCCTCAGTC
GCTCCCCCAACCACAGCAAACTCTTTCCACACTGAAAATCATCACCCCTATCACGAGAGTCATCATCCTCCACCAGGACTTGCATGTTCTTATAAACTCACATCGTTTGG
ACAACTCAAGAATATTGGTTGGGTTGGGTTACATCAATGTGTTGGTATGTGCCTGGAAGGTTGTTCATCATTAAACTTGTGGGTCATGCTGCTTGCTAAGTGCTATTATC
TATTAAACTTGTGGGTACAGCTATCAATTGTGGATAATTCAAAACAAACCTAAAAGTCGCAAGCTAAAAAGAAACACCCTCCAGAAGTTCATCTAATTTTATGATGAATA
AGCTAATAAAAGTTGTAGGTCCTTTATATTAGATCTTCCACCCCAAAAGTTTTAGGATGAGTCAACATAGATTGACTCGGTGGTTAAAGAGGACTTTGGAGATTAAGAGG
CTATAATTTCAATCCATGGCGACTATCTACTATTTACGAATCAATTTTCTACGTGTCACTTTGACATCCAAATATTGTATGGGTTTGTTCTGTAAAAATAGTCGAGATGA
GTGTATGTTGACCCGAACCAC
Protein sequenceShow/hide protein sequence
MDDRKEKNAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASVAPPTTANSFHTENHHPYHESHHPPPGLACSYKLTSFGQLKNIGWVGLH
QCVGMCLEGCSSLNLWVMLLAKCYYLLNLWVQLSIVDNSKQT