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Sed0016543 (gene) of Chayote v1 genome

Gene IDSed0016543
OrganismSechium edule (Chayote v1)
Descriptionprotein CHLORORESPIRATORY REDUCTION 7, chloroplastic
Genome locationLG06:11377958..11379524
RNA-Seq ExpressionSed0016543
SyntenySed0016543
Gene Ontology termsGO:0010275 - NAD(P)H dehydrogenase complex assembly (biological process)
GO:0009570 - chloroplast stroma (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR021954 - Protein CHLORORESPIRATORY REDUCTION 7
IPR038150 - Protein CHLORORESPIRATORY REDUCTION 7-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004151801.2 protein CHLORORESPIRATORY REDUCTION 7, chloroplastic [Cucumis sativus]2.7e-4763.41Show/hide
Query:  MERALHKHFQSCNGAIVYSNSTLY-PCKRGRVENHNYQMEESRRGGSNSKC-FLGA----------SKNHQQQIKVYASRRRRSNQSSDTFVVMEPGEDE
        ME ALH+HFQS NG I+YSN  LY   KR R    ++++ ESR   + SKC FLGA          S   QQQIKV+ SRRRR N+SSDT+V++EPGE+E
Subjt:  MERALHKHFQSCNGAIVYSNSTLY-PCKRGRVENHNYQMEESRRGGSNSKC-FLGA----------SKNHQQQIKVYASRRRRSNQSSDTFVVMEPGEDE

Query:  RFVSKEELESILTGWLQNWPGPLPPDLSRFDSTQEAVSFLVKSVCELEIDGDVGSIQWYQVRLE
        +FVSK+ELE+IL GWL+NWP PLPPDLSRF S +EAV+FLVKSVCELEIDGDVGSIQWY+VR++
Subjt:  RFVSKEELESILTGWLQNWPGPLPPDLSRFDSTQEAVSFLVKSVCELEIDGDVGSIQWYQVRLE

XP_022155024.1 protein CHLORORESPIRATORY REDUCTION 7, chloroplastic [Momordica charantia]8.1e-5271.88Show/hide
Query:  MERALHKHFQSCNGAIVYSNSTLYPCKR---GRVENHNYQMEESRRGGSNSKCFLG----ASKNHQQQIKVYASRR-RRSNQSSDTFVVMEPGEDERFVS
        ME AL KHF +CN +I+YSNS LYP +R   G  + H++ + E R GG  SKCFLG    ASKN QQQIKV+ASRR RR NQSSDT+VV+EPGEDE+FVS
Subjt:  MERALHKHFQSCNGAIVYSNSTLYPCKR---GRVENHNYQMEESRRGGSNSKCFLG----ASKNHQQQIKVYASRR-RRSNQSSDTFVVMEPGEDERFVS

Query:  KEELESILTGWLQNWPGPLPPDLSRFDSTQEAVSFLVKSVCELEIDGDVGSIQWYQVRLE
        +EELE+IL GWLQNW GPLPPDLSRF+S +EAVSFL+KSVCELEIDGDVGSIQWYQVRLE
Subjt:  KEELESILTGWLQNWPGPLPPDLSRFDSTQEAVSFLVKSVCELEIDGDVGSIQWYQVRLE

XP_022948390.1 protein CHLORORESPIRATORY REDUCTION 7, chloroplastic [Cucurbita moschata]3.7e-4967.27Show/hide
Query:  MER-ALHKHFQSCNGAIVYSNSTLYPCKRGRVENHNYQMEESRRGGSNSKCFLGAS----------KNHQQQIKVYA-SRRRRSNQSSDTFVVMEPGEDE
        MER ALHKHFQS NG I YSNSTLYP +R R E              NSKC  GAS            HQQ+IKVYA SRRRR+N+SSDT+V++EPGEDE
Subjt:  MER-ALHKHFQSCNGAIVYSNSTLYPCKRGRVENHNYQMEESRRGGSNSKCFLGAS----------KNHQQQIKVYA-SRRRRSNQSSDTFVVMEPGEDE

Query:  RFVSKEELESILTGWLQNWPG-PLPPDLSRFDSTQEAVSFLVKSVCELEIDGDVGSIQWYQVRLE
        +FVSK+ELE+IL GWLQNWPG  LPPDL RFDS +EAVSFLVK VCELEIDGD+GSIQWYQVRLE
Subjt:  RFVSKEELESILTGWLQNWPG-PLPPDLSRFDSTQEAVSFLVKSVCELEIDGDVGSIQWYQVRLE

XP_023525361.1 protein CHLORORESPIRATORY REDUCTION 7, chloroplastic [Cucurbita pepo subsp. pepo]6.4e-4966.87Show/hide
Query:  MER-ALHKHFQSCNGAIVYSNSTLYPCKRGRVENHNYQMEESRRGGSNSKCFLGAS----------KNHQQQIKVYAS--RRRRSNQSSDTFVVMEPGED
        MER ALHKHFQS NG I YSNSTLYP +R R E              NSKC  GAS            HQQ+IKVYAS  RRRR+N+SSDT+V++EPGED
Subjt:  MER-ALHKHFQSCNGAIVYSNSTLYPCKRGRVENHNYQMEESRRGGSNSKCFLGAS----------KNHQQQIKVYAS--RRRRSNQSSDTFVVMEPGED

Query:  ERFVSKEELESILTGWLQNWPG-PLPPDLSRFDSTQEAVSFLVKSVCELEIDGDVGSIQWYQVRLE
        E+FVSKEELE+IL GWLQNWPG  LPPDL RF+S +EAVSFLVK VCELEIDGD+GSIQWYQVRLE
Subjt:  ERFVSKEELESILTGWLQNWPG-PLPPDLSRFDSTQEAVSFLVKSVCELEIDGDVGSIQWYQVRLE

XP_038881333.1 protein CHLORORESPIRATORY REDUCTION 7, chloroplastic [Benincasa hispida]1.1e-5370Show/hide
Query:  MERALHKHFQSCNGAIVYSNSTLYPCKRGRVENHNYQMEESRRGGSNSKCFLGAS--------KNHQQQIKVYASRRRRSNQSSDTFVVMEPGEDERFVS
        MERALHKHFQSCNG  +YSNS L  CKR R    +Y++  SRR    SKCFLG S         + +QQIKVY SRRRR NQSSDT+V++EPGE+E+FVS
Subjt:  MERALHKHFQSCNGAIVYSNSTLYPCKRGRVENHNYQMEESRRGGSNSKCFLGAS--------KNHQQQIKVYASRRRRSNQSSDTFVVMEPGEDERFVS

Query:  KEELESILTGWLQNWPGPLPPDLSRFDSTQEAVSFLVKSVCELEIDGDVGSIQWYQVRLE
        KEELE+IL GWL+NWP PLPPDLSRF S +EAVSFLVKSVCELEIDGDVGSIQWYQVRL+
Subjt:  KEELESILTGWLQNWPGPLPPDLSRFDSTQEAVSFLVKSVCELEIDGDVGSIQWYQVRLE

TrEMBL top hitse value%identityAlignment
A0A0A0KZ70 Uncharacterized protein1.3e-4763.41Show/hide
Query:  MERALHKHFQSCNGAIVYSNSTLY-PCKRGRVENHNYQMEESRRGGSNSKC-FLGA----------SKNHQQQIKVYASRRRRSNQSSDTFVVMEPGEDE
        ME ALH+HFQS NG I+YSN  LY   KR R    ++++ ESR   + SKC FLGA          S   QQQIKV+ SRRRR N+SSDT+V++EPGE+E
Subjt:  MERALHKHFQSCNGAIVYSNSTLY-PCKRGRVENHNYQMEESRRGGSNSKC-FLGA----------SKNHQQQIKVYASRRRRSNQSSDTFVVMEPGEDE

Query:  RFVSKEELESILTGWLQNWPGPLPPDLSRFDSTQEAVSFLVKSVCELEIDGDVGSIQWYQVRLE
        +FVSK+ELE+IL GWL+NWP PLPPDLSRF S +EAV+FLVKSVCELEIDGDVGSIQWY+VR++
Subjt:  RFVSKEELESILTGWLQNWPGPLPPDLSRFDSTQEAVSFLVKSVCELEIDGDVGSIQWYQVRLE

A0A5D3CWA0 Protein CHLORORESPIRATORY REDUCTION 71.4e-4663.41Show/hide
Query:  MERALHKHFQSCNGAIVYSNSTLY-PCKRGRVENHNYQMEESRRGGSNSKCFLGA-----------SKNHQQQIKVYASRRRRSNQSSDTFVVMEPGEDE
        ME ALHKH QS NG ++ +NS LY   K  R    +Y++ ES    + SKCFLGA           SK+ QQQIKVY SRRRR N+SSDT+V++EPGE+E
Subjt:  MERALHKHFQSCNGAIVYSNSTLY-PCKRGRVENHNYQMEESRRGGSNSKCFLGA-----------SKNHQQQIKVYASRRRRSNQSSDTFVVMEPGEDE

Query:  RFVSKEELESILTGWLQNWPGPLPPDLSRFDSTQEAVSFLVKSVCELEIDGDVGSIQWYQVRLE
        +FVSK+ELE+IL  WL+NWP  LPPDLSRF S +EAVSFLVKSVCELEIDGDVGSIQWYQVRL+
Subjt:  RFVSKEELESILTGWLQNWPGPLPPDLSRFDSTQEAVSFLVKSVCELEIDGDVGSIQWYQVRLE

A0A6J1DNZ6 protein CHLORORESPIRATORY REDUCTION 7, chloroplastic3.9e-5271.88Show/hide
Query:  MERALHKHFQSCNGAIVYSNSTLYPCKR---GRVENHNYQMEESRRGGSNSKCFLG----ASKNHQQQIKVYASRR-RRSNQSSDTFVVMEPGEDERFVS
        ME AL KHF +CN +I+YSNS LYP +R   G  + H++ + E R GG  SKCFLG    ASKN QQQIKV+ASRR RR NQSSDT+VV+EPGEDE+FVS
Subjt:  MERALHKHFQSCNGAIVYSNSTLYPCKR---GRVENHNYQMEESRRGGSNSKCFLG----ASKNHQQQIKVYASRR-RRSNQSSDTFVVMEPGEDERFVS

Query:  KEELESILTGWLQNWPGPLPPDLSRFDSTQEAVSFLVKSVCELEIDGDVGSIQWYQVRLE
        +EELE+IL GWLQNW GPLPPDLSRF+S +EAVSFL+KSVCELEIDGDVGSIQWYQVRLE
Subjt:  KEELESILTGWLQNWPGPLPPDLSRFDSTQEAVSFLVKSVCELEIDGDVGSIQWYQVRLE

A0A6J1G9P9 protein CHLORORESPIRATORY REDUCTION 7, chloroplastic1.8e-4967.27Show/hide
Query:  MER-ALHKHFQSCNGAIVYSNSTLYPCKRGRVENHNYQMEESRRGGSNSKCFLGAS----------KNHQQQIKVYA-SRRRRSNQSSDTFVVMEPGEDE
        MER ALHKHFQS NG I YSNSTLYP +R R E              NSKC  GAS            HQQ+IKVYA SRRRR+N+SSDT+V++EPGEDE
Subjt:  MER-ALHKHFQSCNGAIVYSNSTLYPCKRGRVENHNYQMEESRRGGSNSKCFLGAS----------KNHQQQIKVYA-SRRRRSNQSSDTFVVMEPGEDE

Query:  RFVSKEELESILTGWLQNWPG-PLPPDLSRFDSTQEAVSFLVKSVCELEIDGDVGSIQWYQVRLE
        +FVSK+ELE+IL GWLQNWPG  LPPDL RFDS +EAVSFLVK VCELEIDGD+GSIQWYQVRLE
Subjt:  RFVSKEELESILTGWLQNWPG-PLPPDLSRFDSTQEAVSFLVKSVCELEIDGDVGSIQWYQVRLE

A0A6J1KD99 protein CHLORORESPIRATORY REDUCTION 7, chloroplastic3.8e-4765.66Show/hide
Query:  MERA-LHKHFQSCNGAIVYSNSTLYPCKRGRVENHNYQMEESRRGGSNSKCFLGA----------SKNHQQQIKVYAS--RRRRSNQSSDTFVVMEPGED
        MERA LHKHFQS NG I YSNSTLYP +R R           R    NSKC  GA          +  HQQQIKVYAS  RRRR+N+SSDT+V++EPGED
Subjt:  MERA-LHKHFQSCNGAIVYSNSTLYPCKRGRVENHNYQMEESRRGGSNSKCFLGA----------SKNHQQQIKVYAS--RRRRSNQSSDTFVVMEPGED

Query:  ERFVSKEELESILTGWLQNWPG-PLPPDLSRFDSTQEAVSFLVKSVCELEIDGDVGSIQWYQVRLE
        E+FVSK ELE+IL GWLQNWPG  LPPDL RF+S +EAVSFLVK VCELEIDGD+GSIQWYQV LE
Subjt:  ERFVSKEELESILTGWLQNWPG-PLPPDLSRFDSTQEAVSFLVKSVCELEIDGDVGSIQWYQVRLE

SwissProt top hitse value%identityAlignment
Q9FL87 Protein CHLORORESPIRATORY REDUCTION 7, chloroplastic1.5e-2960.61Show/hide
Query:  SKNHQQQIKVYASRRRRSNQSSDTFVVMEPGEDERFVSKEELESILTGWLQNWP-GPLPPDLSRFDSTQEAVSFLVKSVCELEIDGDVGSIQWYQVRLE
        S+  +    V A+RRRR + +SDT+V++E G+DE+FV+++EL++ L GWL+NWP   LPPDL+RFD   EAV FLVK+VCELEIDG+VGS+QWYQVRLE
Subjt:  SKNHQQQIKVYASRRRRSNQSSDTFVVMEPGEDERFVSKEELESILTGWLQNWP-GPLPPDLSRFDSTQEAVSFLVKSVCELEIDGDVGSIQWYQVRLE

Arabidopsis top hitse value%identityAlignment
AT5G39210.1 chlororespiratory reduction 71.1e-3060.61Show/hide
Query:  SKNHQQQIKVYASRRRRSNQSSDTFVVMEPGEDERFVSKEELESILTGWLQNWP-GPLPPDLSRFDSTQEAVSFLVKSVCELEIDGDVGSIQWYQVRLE
        S+  +    V A+RRRR + +SDT+V++E G+DE+FV+++EL++ L GWL+NWP   LPPDL+RFD   EAV FLVK+VCELEIDG+VGS+QWYQVRLE
Subjt:  SKNHQQQIKVYASRRRRSNQSSDTFVVMEPGEDERFVSKEELESILTGWLQNWP-GPLPPDLSRFDSTQEAVSFLVKSVCELEIDGDVGSIQWYQVRLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGAGCTCTTCACAAGCACTTCCAAAGCTGCAATGGAGCAATTGTTTATTCCAATTCTACCCTCTACCCATGTAAAAGAGGAAGAGTAGAAAACCATAATTATCA
AATGGAAGAATCAAGAAGAGGTGGGTCAAACTCAAAGTGTTTTTTGGGTGCTTCTAAAAATCATCAACAACAAATCAAGGTATATGCAAGTAGAAGAAGAAGGTCAAATC
AAAGCAGTGACACATTTGTGGTAATGGAGCCTGGAGAAGATGAGAGATTTGTTTCCAAAGAAGAATTGGAATCCATTTTAACAGGTTGGCTTCAGAATTGGCCTGGCCCT
CTTCCACCTGACCTCTCACGCTTTGATTCCACTCAGGAAGCTGTTTCTTTCTTGGTTAAGTCTGTTTGTGAGCTCGAGATTGATGGCGATGTCGGTTCCATTCAATGGTA
CCAAGTTCGTCTCGAGTAG
mRNA sequenceShow/hide mRNA sequence
GAAAATGGAGGGCAAAAGTGGAAAAAGAAGGTTGAGGCAATTGTTAAATTAAAACATTATCCCCAAGAAATCAGTGGGTTTGTTTCTCTTGCTGATTGAAGGTTCAAATG
GAGAGAGCTCTTCACAAGCACTTCCAAAGCTGCAATGGAGCAATTGTTTATTCCAATTCTACCCTCTACCCATGTAAAAGAGGAAGAGTAGAAAACCATAATTATCAAAT
GGAAGAATCAAGAAGAGGTGGGTCAAACTCAAAGTGTTTTTTGGGTGCTTCTAAAAATCATCAACAACAAATCAAGGTATATGCAAGTAGAAGAAGAAGGTCAAATCAAA
GCAGTGACACATTTGTGGTAATGGAGCCTGGAGAAGATGAGAGATTTGTTTCCAAAGAAGAATTGGAATCCATTTTAACAGGTTGGCTTCAGAATTGGCCTGGCCCTCTT
CCACCTGACCTCTCACGCTTTGATTCCACTCAGGAAGCTGTTTCTTTCTTGGTTAAGTCTGTTTGTGAGCTCGAGATTGATGGCGATGTCGGTTCCATTCAATGGTACCA
AGTTCGTCTCGAGTAGTGTGACTCGCCATTATTCGTTGTTTGGGACGTATGAAATGATCATTCCTAGAGTTTTTGAGTCTGTAATGATTTAACAGGAATACAGATGAAAA
AAAACTCCCTATTTTTGTGTTAATTAAAAGCGCACAAGCTATTTTTTCGTGTT
Protein sequenceShow/hide protein sequence
MERALHKHFQSCNGAIVYSNSTLYPCKRGRVENHNYQMEESRRGGSNSKCFLGASKNHQQQIKVYASRRRRSNQSSDTFVVMEPGEDERFVSKEELESILTGWLQNWPGP
LPPDLSRFDSTQEAVSFLVKSVCELEIDGDVGSIQWYQVRLE