CuGenDBv2

Gene ID	Sed0016572
Organism	Sechium edule (Chayote v1)
Description	axial regulator YABBY 4
Genome location	LG06:41269917..41274637
RNA-Seq Expression	Sed0016572
Synteny	Sed0016572
Gene Ontology terms	GO:0007275 - multicellular organism development (biological process)
InterPro domains	IPR006780 - YABBY protein

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6601510.1 Axial regulator YABBY 4, partial [Cucurbita argyrosperma subsp. sororia]

2.0e-27

67.59

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Query:  MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPHFLSSLSRNASKEACGE-----------------REFQVEE
        MNHLFELPE+IC VQCGICTTILLV VPC SLSM VTV CGHCSSLLSVNM++ATLVP HFLSSLSRN  KEAC E                  E++VEE
Subjt:  MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPHFLSSLSRNASKEACGE-----------------REFQVEE

Query:  DLIPRNPP
         LIP  PP
Subjt:  DLIPRNPP

KAG7032292.1 Axial regulator YABBY 4, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.0e-27

58.09

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Query:  MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPHFLSSLSRNASKEACGE-----------------REFQVEE
        MNHLFELPE+IC VQCGICTTILLV VPC SLSM VTV CGHCSSLLSVNM++ATLVP HFLSSLSRN  KEAC E                  E++VEE
Subjt:  MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPHFLSSLSRNASKEACGE-----------------REFQVEE

Query:  DLIPRNPP------------PKADGCADKDSRTKKK
         LIP  PP            P A  C  KD   + K
Subjt:  DLIPRNPP------------PKADGCADKDSRTKKK

XP_023511763.1 axial regulator YABBY 4 isoform X1 [Cucurbita pepo subsp. pepo]

2.7e-27

58.09

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Query:  MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPHFLSSLSRNASKEACGE-----------------REFQVEE
        MNHLFELPE+IC VQCGICTTILLV VPC SLSM VTV CGHCSSLLSVNMM+ATLVP HFLSSLSRN  KE C E                  E++VEE
Subjt:  MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPHFLSSLSRNASKEACGE-----------------REFQVEE

Query:  DLIPRNPP------------PKADGCADKDSRTKKK
         LIP  PP            P A  C  KD   + K
Subjt:  DLIPRNPP------------PKADGCADKDSRTKKK

XP_023511764.1 axial regulator YABBY 4 isoform X2 [Cucurbita pepo subsp. pepo]

2.7e-27

58.09

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Query:  MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPHFLSSLSRNASKEACGE-----------------REFQVEE
        MNHLFELPE+IC VQCGICTTILLV VPC SLSM VTV CGHCSSLLSVNMM+ATLVP HFLSSLSRN  KE C E                  E++VEE
Subjt:  MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPHFLSSLSRNASKEACGE-----------------REFQVEE

Query:  DLIPRNPP------------PKADGCADKDSRTKKK
         LIP  PP            P A  C  KD   + K
Subjt:  DLIPRNPP------------PKADGCADKDSRTKKK

XP_023511765.1 axial regulator YABBY 4 isoform X3 [Cucurbita pepo subsp. pepo]

2.7e-27

58.09

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Query:  MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPHFLSSLSRNASKEACGE-----------------REFQVEE
        MNHLFELPE+IC VQCGICTTILLV VPC SLSM VTV CGHCSSLLSVNMM+ATLVP HFLSSLSRN  KE C E                  E++VEE
Subjt:  MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPHFLSSLSRNASKEACGE-----------------REFQVEE

Query:  DLIPRNPP------------PKADGCADKDSRTKKK
         LIP  PP            P A  C  KD   + K
Subjt:  DLIPRNPP------------PKADGCADKDSRTKKK

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BDZ8 axial regulator YABBY 4

3.7e-27

50.3

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Query:  MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPHFLSSLSRNASKEACGE-----------------REFQVEE
        MNHLF+LPE+IC VQCGICTTILLV VPC SLSM+VTV CGHCSSLLSVNMMKATLVP HFLSSLS N  KE   E                  E++VEE
Subjt:  MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPHFLSSLSRNASKEACGE-----------------REFQVEE

Query:  DLIPRNPP------------PKADGCADKDS---------RTKKKESFRSFNYLVLWFSLIDEKHERER
        DLIP   P            P A  C  KD              KE+FR+       F  I EK ++E+
Subjt:  DLIPRNPP------------PKADGCADKDS---------RTKKKESFRSFNYLVLWFSLIDEKHERER

A0A6J1GXS4 axial regulator YABBY 4-like isoform X1

6.4e-27

57.35

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Query:  MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPHFLSSLSRNASKEACGE-----------------REFQVEE
        MNH FELPE+IC VQCGICTTILLV VPC SLSM VTV CGHCSSLLSVNM++ATLVP HFLSSLSRN  KEAC E                  E++VEE
Subjt:  MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPHFLSSLSRNASKEACGE-----------------REFQVEE

Query:  DLIPRNPP------------PKADGCADKDSRTKKK
         LIP  PP            P A  C  KD   + K
Subjt:  DLIPRNPP------------PKADGCADKDSRTKKK

A0A6J1J630 axial regulator YABBY 4 isoform X1

2.9e-27

57.35

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Query:  MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPHFLSSLSRNASKEACGE-----------------REFQVEE
        MNHLFELPE+IC VQCGICTTILLV VPC SLSM VTV CGHCSSLLSVNM++ATLVP HFLSSLSRN  KE C E                  E++VEE
Subjt:  MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPHFLSSLSRNASKEACGE-----------------REFQVEE

Query:  DLIPRNPP------------PKADGCADKDSRTKKK
         LIP  PP            P A  C  KD   + K
Subjt:  DLIPRNPP------------PKADGCADKDSRTKKK

A0A6J1JCH4 axial regulator YABBY 4 isoform X2

2.9e-27

57.35

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Query:  MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPHFLSSLSRNASKEACGE-----------------REFQVEE
        MNHLFELPE+IC VQCGICTTILLV VPC SLSM VTV CGHCSSLLSVNM++ATLVP HFLSSLSRN  KE C E                  E++VEE
Subjt:  MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPHFLSSLSRNASKEACGE-----------------REFQVEE

Query:  DLIPRNPP------------PKADGCADKDSRTKKK
         LIP  PP            P A  C  KD   + K
Subjt:  DLIPRNPP------------PKADGCADKDSRTKKK

A0A6J1JEX5 axial regulator YABBY 4 isoform X4

2.9e-27

57.35

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Query:  MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPHFLSSLSRNASKEACGE-----------------REFQVEE
        MNHLFELPE+IC VQCGICTTILLV VPC SLSM VTV CGHCSSLLSVNM++ATLVP HFLSSLSRN  KE C E                  E++VEE
Subjt:  MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPHFLSSLSRNASKEACGE-----------------REFQVEE

Query:  DLIPRNPP------------PKADGCADKDSRTKKK
         LIP  PP            P A  C  KD   + K
Subjt:  DLIPRNPP------------PKADGCADKDSRTKKK

SwissProt top hits

e value

%identity

Alignment

A2X7Q3 Protein YABBY 4

1.2e-06

56.86

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Query:  EQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPP
        EQ+C V C  C TIL V VPC SL  +VTV CGHC++LLSVN+    L  P
Subjt:  EQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPP

Q01JG2 Protein YABBY 5

1.6e-06

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Query:  EQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVP
        EQ+C V C  C TIL V VPC SL  +VTV CGHC++LLSVN ++  L+P
Subjt:  EQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVP

Q0JBF0 Protein YABBY 5

1.6e-06

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Query:  EQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVP
        EQ+C V C  C TIL V VPC SL  +VTV CGHC++LLSVN ++  L+P
Subjt:  EQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVP

Q6H668 Protein YABBY 4

1.2e-06

56.86

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Query:  EQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPP
        EQ+C V C  C TIL V VPC SL  +VTV CGHC++LLSVN+    L  P
Subjt:  EQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPP

Q9LDT3 Axial regulator YABBY 4

8.0e-19

72.73

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Query:  MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPHFLSSLS
        +NHLF+LP QIC VQCG CTTILLV VP  SLSM VTV CGHC+SLLSVN+MKA+ +P H L+SLS
Subjt:  MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPHFLSSLS

Arabidopsis top hits

e value

%identity

Alignment

AT1G08465.1 Plant-specific transcription factor YABBY family protein

1.6e-06

51.85

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Query:  EQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNM---MKATLVPP
        E++C V C  CTTIL V VP  SL   VTV CGHC++LLS+N+   +  T  PP
Subjt:  EQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNM---MKATLVPP

AT1G23420.1 Plant-specific transcription factor YABBY family protein

5.7e-20

72.73

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Query:  MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPHFLSSLS
        +NHLF+LP QIC VQCG CTTILLV VP  SLSM VTV CGHC+SLLSVN+MKA+ +P H L+SLS
Subjt:  MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPHFLSSLS

AT2G26580.1 plant-specific transcription factor YABBY family protein

1.2e-06

39.58

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Query:  EQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKA--TLVPPHF---------LSSLSRNASKEACGEREFQVEEDLIPRNPPPK
        EQ+C + C  C  IL V VPC SL   VTV CGHC++L SVNM  A  +L  P+F           S SR+ +K         + E  I   PP K
Subjt:  EQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKA--TLVPPHF---------LSSLSRNASKEACGEREFQVEEDLIPRNPPPK

AT2G26580.2 plant-specific transcription factor YABBY family protein

1.2e-06

39.58

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Query:  EQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKA--TLVPPHF---------LSSLSRNASKEACGEREFQVEEDLIPRNPPPK
        EQ+C + C  C  IL V VPC SL   VTV CGHC++L SVNM  A  +L  P+F           S SR+ +K         + E  I   PP K
Subjt:  EQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKA--TLVPPHF---------LSSLSRNASKEACGEREFQVEEDLIPRNPPPK

AT4G00180.1 Plant-specific transcription factor YABBY family protein

5.5e-07

52.73

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Query:  FELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNM-MKATLVP
        F   +Q+C V C  C T+L V VP  SL  +VTV CGHCS+LLSV + M+A L+P
Subjt:  FELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNM-MKATLVP

Sequences

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CDS sequence

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ATGAACCATCTCTTTGAACTGCCTGAGCAAATTTGTTGTGTGCAATGTGGAATTTGCACCACCATTTTGTTGGTCATTGTGCCGTGCATCAGCTTGTCGATGTCGGTGAC
GGTGGCATGCGGCCACTGCTCAAGTCTCCTCTCTGTCAACATGATGAAAGCCACTCTGGTTCCTCCTCATTTTCTGTCTTCTCTTTCTCGCAATGCGTCCAAAGAAGCTT
GTGGAGAAAGAGAATTTCAAGTTGAAGAAGACTTGATTCCTAGAAATCCACCGCCGAAGGCCGACGGTTGCGCAGATAAAGATTCAAGAACTAAAAAAAAAGAAAGTTTC
AGATCATTCAATTATTTGGTTTTGTGGTTTTCTTTGATTGATGAAAAACATGAACGTGAGAGATGA

mRNA sequence

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Protein sequence

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MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPHFLSSLSRNASKEACGEREFQVEEDLIPRNPPPKADGCADKDSRTKKKESF
RSFNYLVLWFSLIDEKHERER

Sed0016572 (gene) of Chayote v1 genome