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Sed0016585 (gene) of Chayote v1 genome

Gene IDSed0016585
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG10:37078154..37078758
RNA-Seq ExpressionSed0016585
SyntenySed0016585
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031272.1 hypothetical protein E6C27_scaffold139G00250 [Cucumis melo var. makuwa]3.5e-1375Show/hide
Query:  MAIQRLEFCLEMLRMAINFVVVVAESVGEAIHRESQLPQRPAANPRVPIPFVGFYP
        M IQRLE CLE+LRMAINFVVVVAESVG+ IHRE Q    P A  RVP+PFVGFYP
Subjt:  MAIQRLEFCLEMLRMAINFVVVVAESVGEAIHRESQLPQRPAANPRVPIPFVGFYP
KAB2047366.1 hypothetical protein ES319_A13G040000v1 [Gossypium barbadense]2.3e-0446.03Show/hide
Query:  MAIQRLEFCLEMLRMAINFVVVVAESVGEAIHRES-------QLPQRPAANPRVPIPFVGFYP
        M +QRLE C++M+++ I FV+VVAE+VG  IH+          +P R  A P  P+PFVGF P
Subjt:  MAIQRLEFCLEMLRMAINFVVVVAESVGEAIHRES-------QLPQRPAANPRVPIPFVGFYP
OAY29431.1 hypothetical protein MANES_15G144200v8 [Manihot esculenta]2.3e-0444.64Show/hide
Query:  MAIQRLEFCLEMLRMAINFVVVVAESVGEAIHRESQLPQRPAANPRVPIPFVGFYP
        M  QRLE C++++R+A+ FV +VAE++G  I ++S     P     VP+PFVGF P
Subjt:  MAIQRLEFCLEMLRMAINFVVVVAESVGEAIHRESQLPQRPAANPRVPIPFVGFYP
XP_015874275.1 uncharacterized protein LOC107411246 [Ziziphus jujuba]9.3e-0656.14Show/hide
Query:  MAIQRLEFCLEMLRMAINFVVVVAESVGEAIHRE-SQLPQRPAANPRVPIPFVGFYP
        M IQR+E C+E+L+MAI FV+VVAE+VG  IH+  S    R +A P  P+PF+GFYP
Subjt:  MAIQRLEFCLEMLRMAINFVVVVAESVGEAIHRE-SQLPQRPAANPRVPIPFVGFYP
XP_021286324.1 uncharacterized protein LOC110418034 [Herrania umbratica]2.3e-0449.09Show/hide
Query:  IQRLEFCLEMLRMAINFVVVVAESVGEAIHRESQLPQRPAANP-RVPIPFVGFYP
        +QRLE C+E+L++AI FV+VVAE+VG  IH+  + P          P+PFVGF P
Subjt:  IQRLEFCLEMLRMAINFVVVVAESVGEAIHRESQLPQRPAANP-RVPIPFVGFYP
TrEMBL top hitse value%identityAlignment
A0A0A0K3A1 Uncharacterized protein1.7e-1375Show/hide
Query:  MAIQRLEFCLEMLRMAINFVVVVAESVGEAIHRESQLPQRPAANPRVPIPFVGFYP
        M IQRLE CLE+LRMAINFVVVVAESVG+ IHRE Q    P A  RVP+PFVGFYP
Subjt:  MAIQRLEFCLEMLRMAINFVVVVAESVGEAIHRESQLPQRPAANPRVPIPFVGFYP
A0A5D2MG57 Uncharacterized protein1.1e-0446.03Show/hide
Query:  MAIQRLEFCLEMLRMAINFVVVVAESVGEAIHRES-------QLPQRPAANPRVPIPFVGFYP
        M +QRLE C++M+++ I FV+VVAE+VG  IH+          +P R  A P  P+PFVGF P
Subjt:  MAIQRLEFCLEMLRMAINFVVVVAESVGEAIHRES-------QLPQRPAANPRVPIPFVGFYP
A0A5D3C626 Uncharacterized protein1.7e-1375Show/hide
Query:  MAIQRLEFCLEMLRMAINFVVVVAESVGEAIHRESQLPQRPAANPRVPIPFVGFYP
        M IQRLE CLE+LRMAINFVVVVAESVG+ IHRE Q    P A  RVP+PFVGFYP
Subjt:  MAIQRLEFCLEMLRMAINFVVVVAESVGEAIHRESQLPQRPAANPRVPIPFVGFYP
A0A6J1AIA0 uncharacterized protein LOC1104180341.1e-0449.09Show/hide
Query:  IQRLEFCLEMLRMAINFVVVVAESVGEAIHRESQLPQRPAANP-RVPIPFVGFYP
        +QRLE C+E+L++AI FV+VVAE+VG  IH+  + P          P+PFVGF P
Subjt:  IQRLEFCLEMLRMAINFVVVVAESVGEAIHRESQLPQRPAANP-RVPIPFVGFYP
A0A6P3ZHL2 uncharacterized protein LOC1074112464.5e-0656.14Show/hide
Query:  MAIQRLEFCLEMLRMAINFVVVVAESVGEAIHRE-SQLPQRPAANPRVPIPFVGFYP
        M IQR+E C+E+L+MAI FV+VVAE+VG  IH+  S    R +A P  P+PF+GFYP
Subjt:  MAIQRLEFCLEMLRMAINFVVVVAESVGEAIHRE-SQLPQRPAANPRVPIPFVGFYP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G19030.1 unknown protein8.4e-0542.62Show/hide
Query:  MAIQRLEFCLEMLRMAINFVVVVAESVGEAIHRESQLPQRPAAN-------PRVPIPFVGF
        M  Q+LE C+E++++A+ FV  VAESV EA  +    P  PA +         VPIP VGF
Subjt:  MAIQRLEFCLEMLRMAINFVVVVAESVGEAIHRESQLPQRPAAN-------PRVPIPFVGF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATTCAGAGACTTGAATTCTGCTTGGAGATGCTGAGAATGGCCATCAATTTCGTCGTCGTTGTGGCGGAATCCGTCGGCGAGGCTATTCACCGGGAATCTCAGCT
GCCGCAACGGCCGGCGGCGAACCCTAGGGTTCCGATTCCGTTCGTCGGATTTTACCCCTGA
mRNA sequenceShow/hide mRNA sequence
GAGATTAGAGAAACACGAACAAGAAAATTACTCGAAAAAAAAGAAAAGAAAAAAAAAAATCAGAGCGACGCGGAAAATTGACGAAATCGAAAAAAGCGTTTCGAAATTTT
CGAATCTCGGAAAAGCCCTAAATCGATTCGGCGATTTTTGAAGTTCTTGAAATTCCGGCGAAAATGGCGATTCAGAGACTTGAATTCTGCTTGGAGATGCTGAGAATGGC
CATCAATTTCGTCGTCGTTGTGGCGGAATCCGTCGGCGAGGCTATTCACCGGGAATCTCAGCTGCCGCAACGGCCGGCGGCGAACCCTAGGGTTCCGATTCCGTTCGTCG
GATTTTACCCCTGAAATTCATCCCTCCGCCGCGGACGGCGGCGATGTGGCGATGTTCGTTTGAAGTTAGTGTGAATTTTTGTTTTTTTTTTTTGTAATTTAAATGGAGTT
TTTGTAATTTTTGGAAAATAATTCCAATTGTTATTTTGTTGAAAGTTTTTGGGTTTATCGTCATTTCATTCACCGGAACTTTAGACGGACAATAATTGAGCACAACGTGA
CCTTGAATGGATAATATGTTTTTTTTTTCCTCTTTTATAAACTAAAATAAAATTA
Protein sequenceShow/hide protein sequence
MAIQRLEFCLEMLRMAINFVVVVAESVGEAIHRESQLPQRPAANPRVPIPFVGFYP