CuGenDBv2

Gene ID	Sed0016586
Organism	Sechium edule (Chayote v1)
Description	PAP_fibrillin domain-containing protein
Genome location	LG07:1743765..1748835
RNA-Seq Expression	Sed0016586
Synteny	Sed0016586
Gene Ontology terms	NA
InterPro domains	IPR006843 - Plastid lipid-associated protein/fibrillin conserved domain IPR039633 - Plastid-lipid-associated protein

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6575222.1 putative plastid-lipid-associated protein 11, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

1.7e-92

83.18

Show/hide

Query:  MAKSLPLLSLPFNSIRT---THSSQFPKICCSSTAIQSESAKRELLALVSDQHRGLKTQKNPRKLASIVKAIDALASLGRDSVTTDDSLSATWRLLWTTE
        MAKSL L S PFNS  +   T  SQ PKI CSS +IQS+S K +LLAL+SDQ RGLKTQK+P+KLASIVK+IDALASL R+SVTTDDSLSATWRLLWTTE
Subjt:  MAKSLPLLSLPFNSIRT---THSSQFPKICCSSTAIQSESAKRELLALVSDQHRGLKTQKNPRKLASIVKAIDALASLGRDSVTTDDSLSATWRLLWTTE

Query:  KEQLFIIHNAHLFGTRAGDVLQVIDVQDKTLNNVITFPPHGVFFVRSSIEVASSQRVNFRFTSAVLRGQNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRD
        KEQLFII  AHLFGT+AGDVLQVIDV+ K+LNNVITFPP GVFFVRSSIEVASSQRVNFRFTSAVLRG+NWEIPLPPFGQGWF+TVYLDD+IRVVKDIRD
Subjt:  KEQLFIIHNAHLFGTRAGDVLQVIDVQDKTLNNVITFPPHGVFFVRSSIEVASSQRVNFRFTSAVLRGQNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRD

Query:  DYLIVERAPYTWKE
        DYLIVERAPYTWKE
Subjt:  DYLIVERAPYTWKE

XP_004140490.1 probable plastid-lipid-associated protein 11, chloroplastic [Cucumis sativus]

1.3e-92

83.57

Show/hide

Query:  MAKSLPLLSLP--FNSIRTTHSSQFPKICCSSTAIQSESAKRELLALVSDQHRGLKTQKNPRKLASIVKAIDALASLGRDSVTTDDSLSATWRLLWTTEK
        MAKSL L SLP  F S  T+H S  PKI CSS + QS+SAKR+LL L+SDQ RGLKTQKNP+KLASIVK+ID LASLGR+SVTTDDSLSATWRLLWTTEK
Subjt:  MAKSLPLLSLP--FNSIRTTHSSQFPKICCSSTAIQSESAKRELLALVSDQHRGLKTQKNPRKLASIVKAIDALASLGRDSVTTDDSLSATWRLLWTTEK

Query:  EQLFIIHNAHLFGTRAGDVLQVIDVQDKTLNNVITFPPHGVFFVRSSIEVASSQRVNFRFTSAVLRGQNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRDD
        EQLFII  AHLFGTRAGDVLQVIDV+ K+LNNVITFPP GVFFVRS+IEVASSQRVNFRFTSAVLRG+NWEIPLPPFGQGWFDTVYLDDEIRVVKDIR D
Subjt:  EQLFIIHNAHLFGTRAGDVLQVIDVQDKTLNNVITFPPHGVFFVRSSIEVASSQRVNFRFTSAVLRGQNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRDD

Query:  YLIVERAPYTWKE
        YLIVERAPY+W E
Subjt:  YLIVERAPYTWKE

XP_008458126.1 PREDICTED: probable plastid-lipid-associated protein 11 isoform X1 [Cucumis melo]

1.7e-92

83.57

Show/hide

Query:  MAKSLPLLSLPF--NSIRTTHSSQFPKICCSSTAIQSESAKRELLALVSDQHRGLKTQKNPRKLASIVKAIDALASLGRDSVTTDDSLSATWRLLWTTEK
        MAKSL L SLPF   S  TTH S  PKI CSS +IQS+SAK +LL L+SDQ RGLKTQKNP+KLASIVK+ID LASLGR+SVTTDDSLSATWRLLWTTEK
Subjt:  MAKSLPLLSLPF--NSIRTTHSSQFPKICCSSTAIQSESAKRELLALVSDQHRGLKTQKNPRKLASIVKAIDALASLGRDSVTTDDSLSATWRLLWTTEK

Query:  EQLFIIHNAHLFGTRAGDVLQVIDVQDKTLNNVITFPPHGVFFVRSSIEVASSQRVNFRFTSAVLRGQNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRDD
        EQLFII  AHLFGT+AGDVLQVIDV+ K+LNNVITFPP GVFFVRS+IEVASSQRVNFRFTSAVLRG+NWEIPLPPFGQGWFDTVYLDDEIRVVKDIR D
Subjt:  EQLFIIHNAHLFGTRAGDVLQVIDVQDKTLNNVITFPPHGVFFVRSSIEVASSQRVNFRFTSAVLRGQNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRDD

Query:  YLIVERAPYTWKE
        YLIVERAPY+W E
Subjt:  YLIVERAPYTWKE

XP_022959112.1 probable plastid-lipid-associated protein 11, chloroplastic isoform X1 [Cucurbita moschata]

2.2e-92

83.18

Show/hide

Query:  MAKSLPLLSLPFNSIRT---THSSQFPKICCSSTAIQSESAKRELLALVSDQHRGLKTQKNPRKLASIVKAIDALASLGRDSVTTDDSLSATWRLLWTTE
        MAKSL L S PFNS  +   T  SQ PKI CSS +IQS+S K +LLAL+SDQ RGLKTQK+P+KLASIVK+IDALASL R+SVTTDDSLSATWRLLWTTE
Subjt:  MAKSLPLLSLPFNSIRT---THSSQFPKICCSSTAIQSESAKRELLALVSDQHRGLKTQKNPRKLASIVKAIDALASLGRDSVTTDDSLSATWRLLWTTE

Query:  KEQLFIIHNAHLFGTRAGDVLQVIDVQDKTLNNVITFPPHGVFFVRSSIEVASSQRVNFRFTSAVLRGQNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRD
        KEQLFII  AHLFGT+AGDVLQVIDV+ K+LNNVITFPP GVFFVRSSIEVASSQRVNFRFTSAVLRG+NWEIPLPPFGQGWF+TVYLDD+IRVVKDIRD
Subjt:  KEQLFIIHNAHLFGTRAGDVLQVIDVQDKTLNNVITFPPHGVFFVRSSIEVASSQRVNFRFTSAVLRGQNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRD

Query:  DYLIVERAPYTWKE
        DYLIVERAPYTWKE
Subjt:  DYLIVERAPYTWKE

XP_023547719.1 probable plastid-lipid-associated protein 11, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo]

3.4e-93

83.18

Show/hide

Query:  MAKSLPLLSLPFNSIRT---THSSQFPKICCSSTAIQSESAKRELLALVSDQHRGLKTQKNPRKLASIVKAIDALASLGRDSVTTDDSLSATWRLLWTTE
        MAKSL L S PFNS  +   TH SQ PKI CSS +IQS+S + +LLAL+SDQ RGLKTQK+P+KLASIVK+IDALASLGR+SVTTDDSLSATWRLLWTTE
Subjt:  MAKSLPLLSLPFNSIRT---THSSQFPKICCSSTAIQSESAKRELLALVSDQHRGLKTQKNPRKLASIVKAIDALASLGRDSVTTDDSLSATWRLLWTTE

Query:  KEQLFIIHNAHLFGTRAGDVLQVIDVQDKTLNNVITFPPHGVFFVRSSIEVASSQRVNFRFTSAVLRGQNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRD
        KEQLFII  AHLFGT+AGDVLQVIDV+ K+LNNVITFPP GVFFVRSSIEVASSQRVNFRFTSAVLRG+NWEIPLPPFGQGWF+TVYLD++IRVVKDIRD
Subjt:  KEQLFIIHNAHLFGTRAGDVLQVIDVQDKTLNNVITFPPHGVFFVRSSIEVASSQRVNFRFTSAVLRGQNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRD

Query:  DYLIVERAPYTWKE
        DYLIVERAPYTWKE
Subjt:  DYLIVERAPYTWKE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KDV9 PAP_fibrillin domain-containing protein

6.3e-93

83.57

Show/hide

Query:  MAKSLPLLSLP--FNSIRTTHSSQFPKICCSSTAIQSESAKRELLALVSDQHRGLKTQKNPRKLASIVKAIDALASLGRDSVTTDDSLSATWRLLWTTEK
        MAKSL L SLP  F S  T+H S  PKI CSS + QS+SAKR+LL L+SDQ RGLKTQKNP+KLASIVK+ID LASLGR+SVTTDDSLSATWRLLWTTEK
Subjt:  MAKSLPLLSLP--FNSIRTTHSSQFPKICCSSTAIQSESAKRELLALVSDQHRGLKTQKNPRKLASIVKAIDALASLGRDSVTTDDSLSATWRLLWTTEK

Query:  EQLFIIHNAHLFGTRAGDVLQVIDVQDKTLNNVITFPPHGVFFVRSSIEVASSQRVNFRFTSAVLRGQNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRDD
        EQLFII  AHLFGTRAGDVLQVIDV+ K+LNNVITFPP GVFFVRS+IEVASSQRVNFRFTSAVLRG+NWEIPLPPFGQGWFDTVYLDDEIRVVKDIR D
Subjt:  EQLFIIHNAHLFGTRAGDVLQVIDVQDKTLNNVITFPPHGVFFVRSSIEVASSQRVNFRFTSAVLRGQNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRDD

Query:  YLIVERAPYTWKE
        YLIVERAPY+W E
Subjt:  YLIVERAPYTWKE

A0A1S3C7Q5 probable plastid-lipid-associated protein 11 isoform X1

8.3e-93

83.57

Show/hide

Query:  MAKSLPLLSLPF--NSIRTTHSSQFPKICCSSTAIQSESAKRELLALVSDQHRGLKTQKNPRKLASIVKAIDALASLGRDSVTTDDSLSATWRLLWTTEK
        MAKSL L SLPF   S  TTH S  PKI CSS +IQS+SAK +LL L+SDQ RGLKTQKNP+KLASIVK+ID LASLGR+SVTTDDSLSATWRLLWTTEK
Subjt:  MAKSLPLLSLPF--NSIRTTHSSQFPKICCSSTAIQSESAKRELLALVSDQHRGLKTQKNPRKLASIVKAIDALASLGRDSVTTDDSLSATWRLLWTTEK

Query:  EQLFIIHNAHLFGTRAGDVLQVIDVQDKTLNNVITFPPHGVFFVRSSIEVASSQRVNFRFTSAVLRGQNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRDD
        EQLFII  AHLFGT+AGDVLQVIDV+ K+LNNVITFPP GVFFVRS+IEVASSQRVNFRFTSAVLRG+NWEIPLPPFGQGWFDTVYLDDEIRVVKDIR D
Subjt:  EQLFIIHNAHLFGTRAGDVLQVIDVQDKTLNNVITFPPHGVFFVRSSIEVASSQRVNFRFTSAVLRGQNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRDD

Query:  YLIVERAPYTWKE
        YLIVERAPY+W E
Subjt:  YLIVERAPYTWKE

A0A6J1H3N2 probable plastid-lipid-associated protein 11, chloroplastic isoform X1

1.1e-92

83.18

Show/hide

Query:  MAKSLPLLSLPFNSIRT---THSSQFPKICCSSTAIQSESAKRELLALVSDQHRGLKTQKNPRKLASIVKAIDALASLGRDSVTTDDSLSATWRLLWTTE
        MAKSL L S PFNS  +   T  SQ PKI CSS +IQS+S K +LLAL+SDQ RGLKTQK+P+KLASIVK+IDALASL R+SVTTDDSLSATWRLLWTTE
Subjt:  MAKSLPLLSLPFNSIRT---THSSQFPKICCSSTAIQSESAKRELLALVSDQHRGLKTQKNPRKLASIVKAIDALASLGRDSVTTDDSLSATWRLLWTTE

Query:  KEQLFIIHNAHLFGTRAGDVLQVIDVQDKTLNNVITFPPHGVFFVRSSIEVASSQRVNFRFTSAVLRGQNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRD
        KEQLFII  AHLFGT+AGDVLQVIDV+ K+LNNVITFPP GVFFVRSSIEVASSQRVNFRFTSAVLRG+NWEIPLPPFGQGWF+TVYLDD+IRVVKDIRD
Subjt:  KEQLFIIHNAHLFGTRAGDVLQVIDVQDKTLNNVITFPPHGVFFVRSSIEVASSQRVNFRFTSAVLRGQNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRD

Query:  DYLIVERAPYTWKE
        DYLIVERAPYTWKE
Subjt:  DYLIVERAPYTWKE

A0A6J1KWG2 probable plastid-lipid-associated protein 11, chloroplastic isoform X1

4.1e-92

83.18

Show/hide

Query:  MAKSLPLLSLPFNSIRT---THSSQFPKICCSSTAIQSESAKRELLALVSDQHRGLKTQKNPRKLASIVKAIDALASLGRDSVTTDDSLSATWRLLWTTE
        MAKSL L S PFNS  +   TH SQ PKI CSS +IQS+S K +LLAL+SDQ RGLKTQK+P+KLASIVK+IDALASL  +SVTTDDSLSATWRLLWTTE
Subjt:  MAKSLPLLSLPFNSIRT---THSSQFPKICCSSTAIQSESAKRELLALVSDQHRGLKTQKNPRKLASIVKAIDALASLGRDSVTTDDSLSATWRLLWTTE

Query:  KEQLFIIHNAHLFGTRAGDVLQVIDVQDKTLNNVITFPPHGVFFVRSSIEVASSQRVNFRFTSAVLRGQNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRD
        KEQLFII  AHLFGT+AGDVLQVIDV+ K+LNNVITFPP GVFFVRSSIEVASSQRVNFRFTSAVLRG+NWEIPLPPFGQGWF+TVYLDD+IRVVKDIRD
Subjt:  KEQLFIIHNAHLFGTRAGDVLQVIDVQDKTLNNVITFPPHGVFFVRSSIEVASSQRVNFRFTSAVLRGQNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRD

Query:  DYLIVERAPYTWKE
        DYLIVERAPYTWKE
Subjt:  DYLIVERAPYTWKE

A0A6J1KYC9 probable plastid-lipid-associated protein 11, chloroplastic isoform X2

2.4e-92

83.18

Show/hide

Query:  MAKSLPLLSLPFNSIRT---THSSQFPKICCSSTAIQSESAKRELLALVSDQHRGLKTQKNPRKLASIVKAIDALASLGRDSVTTDDSLSATWRLLWTTE
        MAKSL L S PFNS  +   TH SQ PKI CSS +IQS+S K +LLAL+SDQ RGLKTQK+P+KLASIVK+IDALASL  +SVTTDDSLSATWRLLWTTE
Subjt:  MAKSLPLLSLPFNSIRT---THSSQFPKICCSSTAIQSESAKRELLALVSDQHRGLKTQKNPRKLASIVKAIDALASLGRDSVTTDDSLSATWRLLWTTE

Query:  KEQLFIIHNAHLFGTRAGDVLQVIDVQDKTLNNVITFPPHGVFFVRSSIEVASSQRVNFRFTSAVLRGQNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRD
        KEQLFII  AHLFGT+AGDVLQVIDV+ K+LNNVITFPP GVFFVRSSIEVASSQRVNFRFTSAVLRG+NWEIPLPPFGQGWF+TVYLDD+IRVVKDIRD
Subjt:  KEQLFIIHNAHLFGTRAGDVLQVIDVQDKTLNNVITFPPHGVFFVRSSIEVASSQRVNFRFTSAVLRGQNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRD

Query:  DYLIVERAPYTWKE
        DYLIVERAPYTWKE
Subjt:  DYLIVERAPYTWKE

SwissProt top hits

e value

%identity

Alignment

O81304 Probable plastid-lipid-associated protein 11, chloroplastic

7.0e-73

65.4

Show/hide

Query:  MAKSLPLLSLPFNSIRTTHSSQFPKICCSSTAIQSESAKRELLALVSDQHRGLKTQKNPRKLASIVKAIDALASLGRDSVTTDDSLSATWRLLWTTEKEQ
        +A SL   S P   +R T  + F +  CS  A  ++ AKR+LL L+S++ RGL+TQK+P+K   IV AI+++  +GR S+TTDDSLSATWRLLWTTEKEQ
Subjt:  MAKSLPLLSLPFNSIRTTHSSQFPKICCSSTAIQSESAKRELLALVSDQHRGLKTQKNPRKLASIVKAIDALASLGRDSVTTDDSLSATWRLLWTTEKEQ

Query:  LFIIHNAHLFGTRAGDVLQVIDVQDKTLNNVITFPPHGVFFVRSSIEVASSQRVNFRFTSAVLRGQNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRDDYL
        LFII  A LFGT AGDVLQVIDV  + LNNVITFPP GVFFVRS I++AS QRVNFRF SAVLRG+NWE+PLPPFG+GWF+ VY+D EIRV KDIR DYL
Subjt:  LFIIHNAHLFGTRAGDVLQVIDVQDKTLNNVITFPPHGVFFVRSSIEVASSQRVNFRFTSAVLRGQNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRDDYL

Query:  IVERAPYTWKE
        IV+RAPY W E
Subjt:  IVERAPYTWKE

Arabidopsis top hits

e value

%identity

Alignment

AT4G00030.1 Plastid-lipid associated protein PAP / fibrillin family protein

5.0e-74

65.4

Show/hide

Query:  MAKSLPLLSLPFNSIRTTHSSQFPKICCSSTAIQSESAKRELLALVSDQHRGLKTQKNPRKLASIVKAIDALASLGRDSVTTDDSLSATWRLLWTTEKEQ
        +A SL   S P   +R T  + F +  CS  A  ++ AKR+LL L+S++ RGL+TQK+P+K   IV AI+++  +GR S+TTDDSLSATWRLLWTTEKEQ
Subjt:  MAKSLPLLSLPFNSIRTTHSSQFPKICCSSTAIQSESAKRELLALVSDQHRGLKTQKNPRKLASIVKAIDALASLGRDSVTTDDSLSATWRLLWTTEKEQ

Query:  LFIIHNAHLFGTRAGDVLQVIDVQDKTLNNVITFPPHGVFFVRSSIEVASSQRVNFRFTSAVLRGQNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRDDYL
        LFII  A LFGT AGDVLQVIDV  + LNNVITFPP GVFFVRS I++AS QRVNFRF SAVLRG+NWE+PLPPFG+GWF+ VY+D EIRV KDIR DYL
Subjt:  LFIIHNAHLFGTRAGDVLQVIDVQDKTLNNVITFPPHGVFFVRSSIEVASSQRVNFRFTSAVLRGQNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRDDYL

Query:  IVERAPYTWKE
        IV+RAPY W E
Subjt:  IVERAPYTWKE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCCAAATCTCTGCCCCTTTTATCTCTCCCCTTCAATTCCATTAGAACAACACATTCCTCTCAGTTCCCCAAAATCTGTTGCTCTTCCACAGCCATTCAATCCGAATC
AGCCAAACGCGAACTCCTCGCCCTCGTATCGGACCAGCACCGAGGCCTCAAGACTCAGAAAAACCCTAGAAAACTTGCTTCCATTGTGAAGGCGATCGACGCGTTGGCTT
CTCTTGGCCGCGATTCTGTCACGACGGACGATTCGCTCTCTGCGACATGGCGCCTTCTTTGGACCACTGAGAAAGAGCAGCTCTTCATCATTCACAACGCTCACTTGTTT
GGTACCCGAGCTGGCGACGTTTTGCAGGTGATTGATGTTCAGGATAAAACTCTTAATAATGTTATTACCTTTCCTCCTCATGGGGTTTTCTTCGTTCGATCTAGTATTGA
AGTTGCTTCCTCTCAGAGAGTGAATTTTAGATTTACGAGTGCTGTTCTGCGAGGACAAAATTGGGAGATCCCTTTGCCACCATTTGGACAGGGTTGGTTTGATACAGTAT
ACCTCGACGACGAAATCCGGGTTGTAAAAGATATCCGAGATGATTATTTGATTGTCGAACGTGCTCCTTACACTTGGAAAGAATGA

mRNA sequence

Show/hide mRNA sequence

AAACTGACAGCCATGGAAATTACAACCATCTTCTTCTTCTTCTTCTTTCTTGTACGATTCCACCATAACCATGGCCAAATCTCTGCCCCTTTTATCTCTCCCCTTCAATT
CCATTAGAACAACACATTCCTCTCAGTTCCCCAAAATCTGTTGCTCTTCCACAGCCATTCAATCCGAATCAGCCAAACGCGAACTCCTCGCCCTCGTATCGGACCAGCAC
CGAGGCCTCAAGACTCAGAAAAACCCTAGAAAACTTGCTTCCATTGTGAAGGCGATCGACGCGTTGGCTTCTCTTGGCCGCGATTCTGTCACGACGGACGATTCGCTCTC
TGCGACATGGCGCCTTCTTTGGACCACTGAGAAAGAGCAGCTCTTCATCATTCACAACGCTCACTTGTTTGGTACCCGAGCTGGCGACGTTTTGCAGGTGATTGATGTTC
AGGATAAAACTCTTAATAATGTTATTACCTTTCCTCCTCATGGGGTTTTCTTCGTTCGATCTAGTATTGAAGTTGCTTCCTCTCAGAGAGTGAATTTTAGATTTACGAGT
GCTGTTCTGCGAGGACAAAATTGGGAGATCCCTTTGCCACCATTTGGACAGGGTTGGTTTGATACAGTATACCTCGACGACGAAATCCGGGTTGTAAAAGATATCCGAGA
TGATTATTTGATTGTCGAACGTGCTCCTTACACTTGGAAAGAATGAAAGATGAATCATAGGCTTCTTCTACTGCAGTAGAAGCATAATGCAGTTGATTATAATAGTGTCA
AGTCATCTAAATTTATGCCCGAATAAGTTTTATTCTTCTAATATCTGTGATGGGGATTAGTTGAATTTCAATGCTTATTTCAATGATTAGATTGAAATTTCACGACATTT
AAACGTCTCAAACCTTAGAACAACCCATAAAATAGTTCACAATTAATCCTTTGGAC

Protein sequence

Show/hide protein sequence

MAKSLPLLSLPFNSIRTTHSSQFPKICCSSTAIQSESAKRELLALVSDQHRGLKTQKNPRKLASIVKAIDALASLGRDSVTTDDSLSATWRLLWTTEKEQLFIIHNAHLF
GTRAGDVLQVIDVQDKTLNNVITFPPHGVFFVRSSIEVASSQRVNFRFTSAVLRGQNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRDDYLIVERAPYTWKE

Sed0016586 (gene) of Chayote v1 genome