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Sed0016637 (gene) of Chayote v1 genome

Gene IDSed0016637
OrganismSechium edule (Chayote v1)
DescriptionDUF4228 domain protein
Genome locationLG14:22352939..22353316
RNA-Seq ExpressionSed0016637
SyntenySed0016637
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603773.1 hypothetical protein SDJN03_04382, partial [Cucurbita argyrosperma subsp. sororia]1.5e-2762.6Show/hide
Query:  MGNCCRGQSSTRTSCDSRN----PPNHGVRRDNGNGDNSFSSSSCS-SLNRSNGSNLREVKIRMTRKELEELVGWLNMADSSFEHVMARLVNVISDQSGD
        MGNCCRGQSST      RN    PP +  +R +G       +SSCS ++  S   N+RE+KIRMT+KEL+ELVGWLNMADSSFE VMARLVNVIS+Q+GD
Subjt:  MGNCCRGQSSTRTSCDSRN----PPNHGVRRDNGNGDNSFSSSSCS-SLNRSNGSNLREVKIRMTRKELEELVGWLNMADSSFEHVMARLVNVISDQSGD

Query:  NKEED--NNGQSVKLRQQLSWKPSLQSIPEI
        + EE+  N GQ VKLRQQ SW+PSLQSIPEI
Subjt:  NKEED--NNGQSVKLRQQLSWKPSLQSIPEI

KAG7033944.1 hypothetical protein SDJN02_03670, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-2863.36Show/hide
Query:  MGNCCRGQSSTRTSCDSRN----PPNHGVRRDNGNGDNSFSSSSCS-SLNRSNGSNLREVKIRMTRKELEELVGWLNMADSSFEHVMARLVNVISDQSGD
        MGNCCRGQSST      RN    PP +  +R +G       +SSCS ++  S   N+RE+KIRMT+KEL+ELVGWLNMADSSFE VMARLVNVIS+Q+GD
Subjt:  MGNCCRGQSSTRTSCDSRN----PPNHGVRRDNGNGDNSFSSSSCS-SLNRSNGSNLREVKIRMTRKELEELVGWLNMADSSFEHVMARLVNVISDQSGD

Query:  NKEED--NNGQSVKLRQQLSWKPSLQSIPEI
        + EED  N GQ VKLRQQ SW+PSLQSIPEI
Subjt:  NKEED--NNGQSVKLRQQLSWKPSLQSIPEI

XP_008441100.1 PREDICTED: uncharacterized protein LOC103485326 [Cucumis melo]6.0e-2967.19Show/hide
Query:  MGNCCRGQSSTR-TSC-DSRNPP--NHGVRRDNGNGDNSFSSSSCSSLNRSNGSNLREVKIRMTRKELEELVGWLNMADSSFEHVMARLVNVISDQSGDN
        MGNCC+GQ ST  T C D R PP  NH  RR           SSC     S  +NLREVKIRMT+KELEELVGWLNMADSSFEHVMARLVNVI+DQ+GDN
Subjt:  MGNCCRGQSSTR-TSC-DSRNPP--NHGVRRDNGNGDNSFSSSSCSSLNRSNGSNLREVKIRMTRKELEELVGWLNMADSSFEHVMARLVNVISDQSGDN

Query:  KEEDNNGQSVKLRQQLSWKPSLQSIPEI
            NN Q VKLRQQ SW+PSLQSIPEI
Subjt:  KEEDNNGQSVKLRQQLSWKPSLQSIPEI

XP_022977330.1 uncharacterized protein LOC111477681 [Cucurbita maxima]3.9e-2864.62Show/hide
Query:  MGNCCRGQSSTR--TSCDSR-NPPNHGVRRDNGNGDNSFSSSSCS-SLNRSNGSNLREVKIRMTRKELEELVGWLNMADSSFEHVMARLVNVISDQSGDN
        MGNCCRGQSST   +  D R  PP +  +R +G G       SCS ++  S   NLRE+KIRMT+KEL+EL+GWLNMADSSFE VMARLVNVISDQ+GD+
Subjt:  MGNCCRGQSSTR--TSCDSR-NPPNHGVRRDNGNGDNSFSSSSCS-SLNRSNGSNLREVKIRMTRKELEELVGWLNMADSSFEHVMARLVNVISDQSGDN

Query:  KEED--NNGQSVKLRQQLSWKPSLQSIPEI
         EED  N GQ VKLRQQ SW+PSLQSIPEI
Subjt:  KEED--NNGQSVKLRQQLSWKPSLQSIPEI

XP_023544016.1 uncharacterized protein LOC111803724 [Cucurbita pepo subsp. pepo]5.6e-2763.08Show/hide
Query:  MGNCCRGQSSTR--TSCDSRN-PPNHGVRRDNGNGDNSFSSSSCS-SLNRSNGSNLREVKIRMTRKELEELVGWLNMADSSFEHVMARLVNVISDQSGDN
        MGNCCRGQSST   +  D R  PP +  +R +G       ++SCS ++  S   NLRE+KIRMT+KEL+ELVGWLNMADSSFE VMARLVNVIS+ +GD+
Subjt:  MGNCCRGQSSTR--TSCDSRN-PPNHGVRRDNGNGDNSFSSSSCS-SLNRSNGSNLREVKIRMTRKELEELVGWLNMADSSFEHVMARLVNVISDQSGDN

Query:  KEED--NNGQSVKLRQQLSWKPSLQSIPEI
         EED  N GQ VKLRQQ SW+PSLQSIPEI
Subjt:  KEED--NNGQSVKLRQQLSWKPSLQSIPEI

TrEMBL top hitse value%identityAlignment
A0A0A0KHU7 Uncharacterized protein6.3e-2460.94Show/hide
Query:  MGNCCRGQSSTRTSCDSR--NPP--NHGVRRDNGNGDNSFSSSSCSSLNRSNGSNLREVKIRMTRKELEELVGWLNMADSSFEHVMARLVNVISDQSGDN
        MGNCC+ QSST     S    PP  NH  RR   N + S           S  +NLREVKIRMT+KEL+ELVGWLNMADSSFE VMARLVNVI+ Q+GDN
Subjt:  MGNCCRGQSSTRTSCDSR--NPP--NHGVRRDNGNGDNSFSSSSCSSLNRSNGSNLREVKIRMTRKELEELVGWLNMADSSFEHVMARLVNVISDQSGDN

Query:  KEEDNNGQSVKLRQQLSWKPSLQSIPEI
            NN Q VKLRQQ SW+PSLQSIPE+
Subjt:  KEEDNNGQSVKLRQQLSWKPSLQSIPEI

A0A1S3B2N5 uncharacterized protein LOC1034853262.9e-2967.19Show/hide
Query:  MGNCCRGQSSTR-TSC-DSRNPP--NHGVRRDNGNGDNSFSSSSCSSLNRSNGSNLREVKIRMTRKELEELVGWLNMADSSFEHVMARLVNVISDQSGDN
        MGNCC+GQ ST  T C D R PP  NH  RR           SSC     S  +NLREVKIRMT+KELEELVGWLNMADSSFEHVMARLVNVI+DQ+GDN
Subjt:  MGNCCRGQSSTR-TSC-DSRNPP--NHGVRRDNGNGDNSFSSSSCSSLNRSNGSNLREVKIRMTRKELEELVGWLNMADSSFEHVMARLVNVISDQSGDN

Query:  KEEDNNGQSVKLRQQLSWKPSLQSIPEI
            NN Q VKLRQQ SW+PSLQSIPEI
Subjt:  KEEDNNGQSVKLRQQLSWKPSLQSIPEI

A0A5D3CNX5 Uncharacterized protein2.9e-2967.19Show/hide
Query:  MGNCCRGQSSTR-TSC-DSRNPP--NHGVRRDNGNGDNSFSSSSCSSLNRSNGSNLREVKIRMTRKELEELVGWLNMADSSFEHVMARLVNVISDQSGDN
        MGNCC+GQ ST  T C D R PP  NH  RR           SSC     S  +NLREVKIRMT+KELEELVGWLNMADSSFEHVMARLVNVI+DQ+GDN
Subjt:  MGNCCRGQSSTR-TSC-DSRNPP--NHGVRRDNGNGDNSFSSSSCSSLNRSNGSNLREVKIRMTRKELEELVGWLNMADSSFEHVMARLVNVISDQSGDN

Query:  KEEDNNGQSVKLRQQLSWKPSLQSIPEI
            NN Q VKLRQQ SW+PSLQSIPEI
Subjt:  KEEDNNGQSVKLRQQLSWKPSLQSIPEI

A0A6J1IM02 uncharacterized protein LOC1114776811.9e-2864.62Show/hide
Query:  MGNCCRGQSSTR--TSCDSR-NPPNHGVRRDNGNGDNSFSSSSCS-SLNRSNGSNLREVKIRMTRKELEELVGWLNMADSSFEHVMARLVNVISDQSGDN
        MGNCCRGQSST   +  D R  PP +  +R +G G       SCS ++  S   NLRE+KIRMT+KEL+EL+GWLNMADSSFE VMARLVNVISDQ+GD+
Subjt:  MGNCCRGQSSTR--TSCDSR-NPPNHGVRRDNGNGDNSFSSSSCS-SLNRSNGSNLREVKIRMTRKELEELVGWLNMADSSFEHVMARLVNVISDQSGDN

Query:  KEED--NNGQSVKLRQQLSWKPSLQSIPEI
         EED  N GQ VKLRQQ SW+PSLQSIPEI
Subjt:  KEED--NNGQSVKLRQQLSWKPSLQSIPEI

A0A7J7C2R3 Uncharacterized protein1.2e-0638.52Show/hide
Query:  MGNCCRGQSSTRTSC-----DSRNPPNHGVRRDNGNG-----DNSFSSSSCSSLNRSNGSNLREVKIRMTRKELEELVGWLNMADSSFEHVMARLVNVIS
        MGNC R +SS+ +S      D  +P   G+  D         D+S SSSS S+  RSN    REVKI++T+K+LEEL+G +++ + S + V+A+L++V  
Subjt:  MGNCCRGQSSTRTSC-----DSRNPPNHGVRRDNGNG-----DNSFSSSSCSSLNRSNGSNLREVKIRMTRKELEELVGWLNMADSSFEHVMARLVNVIS

Query:  DQSGDNKEEDNNGQSVKLRQQLSWKPSLQSIPEIN
                  ++G       Q SW+P+LQSIPEIN
Subjt:  DQSGDNKEEDNNGQSVKLRQQLSWKPSLQSIPEIN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21920.1 unknown protein1.5e-0630.88Show/hide
Query:  MGNCCRGQSSTRTSCDSRNPPNHGVRR----------DNGNGDNSF-SSSSCSSLNRSNGSNLREVKIRMTRKELEELVGWLNMADSSFEHVMARLVNVI
        MGNC      T TS    +  ++  RR          DN +G+     +S+ +S + S+ S  RE+KIR+T+KELE+L+  + +   + E ++++L+   
Subjt:  MGNCCRGQSSTRTSCDSRNPPNHGVRR----------DNGNGDNSF-SSSSCSSLNRSNGSNLREVKIRMTRKELEELVGWLNMADSSFEHVMARLVNVI

Query:  SDQSGDNKEEDNNGQSVKLRQQLSWKPSLQSIPEIN
         DQ G +  +  N           WKP LQSIPE++
Subjt:  SDQSGDNKEEDNNGQSVKLRQQLSWKPSLQSIPEIN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAACTGCTGCAGAGGTCAATCCTCCACCCGGACGAGCTGTGACTCGAGGAATCCGCCGAATCATGGCGTAAGGCGCGACAATGGAAATGGAGATAATTCTTTTTC
TTCCTCTTCTTGTTCGAGTTTGAATCGTTCAAATGGGAGTAATTTGCGAGAGGTGAAAATAAGGATGACGAGGAAGGAGCTCGAGGAATTGGTCGGATGGTTGAACATGG
CGGATTCTAGTTTCGAACATGTTATGGCTCGCCTTGTGAACGTTATAAGCGATCAAAGTGGTGATAATAAAGAAGAGGATAACAATGGCCAATCGGTCAAATTGCGTCAA
CAACTTTCATGGAAGCCTTCTTTGCAAAGCATTCCAGAGATTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTAACTGCTGCAGAGGTCAATCCTCCACCCGGACGAGCTGTGACTCGAGGAATCCGCCGAATCATGGCGTAAGGCGCGACAATGGAAATGGAGATAATTCTTTTTC
TTCCTCTTCTTGTTCGAGTTTGAATCGTTCAAATGGGAGTAATTTGCGAGAGGTGAAAATAAGGATGACGAGGAAGGAGCTCGAGGAATTGGTCGGATGGTTGAACATGG
CGGATTCTAGTTTCGAACATGTTATGGCTCGCCTTGTGAACGTTATAAGCGATCAAAGTGGTGATAATAAAGAAGAGGATAACAATGGCCAATCGGTCAAATTGCGTCAA
CAACTTTCATGGAAGCCTTCTTTGCAAAGCATTCCAGAGATTAATTAA
Protein sequenceShow/hide protein sequence
MGNCCRGQSSTRTSCDSRNPPNHGVRRDNGNGDNSFSSSSCSSLNRSNGSNLREVKIRMTRKELEELVGWLNMADSSFEHVMARLVNVISDQSGDNKEEDNNGQSVKLRQ
QLSWKPSLQSIPEIN