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Sed0016647 (gene) of Chayote v1 genome

Gene IDSed0016647
OrganismSechium edule (Chayote v1)
DescriptionNAC domain-containing protein
Genome locationLG02:44230727..44231341
RNA-Seq ExpressionSed0016647
SyntenySed0016647
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003441 - NAC domain
IPR036093 - NAC domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652623.1 hypothetical protein Csa_013642 [Cucumis sativus]1.4e-3849.14Show/hide
Query:  GIVFAPTDEDCNGSF-------------TLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAI-GAFISS
        G VF PT+E+  G +              LPV+DLYTQEPS +WQ   G+D +D + FTTL KKKSRI+RKV SNG TWSGENK  +VFS  I    + +
Subjt:  GIVFAPTDEDCNGSF-------------TLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAI-GAFISS

Query:  VKRFHYENPKLKGSIEDCSWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLA--SWPPTKI
        +KRF YE  ++K   EDC+W MYEYTL+P  VP+G  HDSYVLC IRK+IVK+ +  + +  +  +  +WP T +
Subjt:  VKRFHYENPKLKGSIEDCSWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLA--SWPPTKI

KGN65836.2 hypothetical protein Csa_019715 [Cucumis sativus]6.1e-3948.57Show/hide
Query:  GIVFAPTDEDCNGSF-------------TLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAI-GAFISS
        G +F PT+E+  G +              LPV+DLYTQEPS +WQ   G+D QD + FTTL KKKSRI+RK+ SNG TWSGENK  +VFS  I    + +
Subjt:  GIVFAPTDEDCNGSF-------------TLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAI-GAFISS

Query:  VKRFHYENPKLKGSIEDCSWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLA--SWPPTKI
        +KRF YE  ++K   EDC+W MYEYTL+P+ VP+G  HDSYVLC IRK+IVK+ +  + +  +  +  +WP T +
Subjt:  VKRFHYENPKLKGSIEDCSWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLA--SWPPTKI

XP_008443570.1 PREDICTED: NAC domain-containing protein 105-like [Cucumis melo]1.0e-4150.82Show/hide
Query:  GIVFAPTDEDCNGSF-------------TLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAIG-AFISS
        G  F PTDE+  G +              LPV+DLY  EPS +WQ  GG+D QD + FTTL KKKSRI+RKV SNG TWS EN+A +VFS  I    + S
Subjt:  GIVFAPTDEDCNGSF-------------TLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAIG-AFISS

Query:  VKRFHYENPKLKG--SIEDCSWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLAS-WPPTKISSSTNTN
        VKRFHY+ PK K    I DC+W MYEYTLDP+ VPKG  HDSYVLC IRK+IVK+ +  + +  + ++S WP T +     T+
Subjt:  VKRFHYENPKLKG--SIEDCSWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLAS-WPPTKISSSTNTN

XP_011660358.2 uncharacterized protein LOC105436381 [Cucumis sativus]1.4e-3849.14Show/hide
Query:  GIVFAPTDEDCNGSF-------------TLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAI-GAFISS
        G VF PT+E+  G +              LPV+DLYTQEPS +WQ   G+D +D + FTTL KKKSRI+RKV SNG TWSGENK  +VFS  I    + +
Subjt:  GIVFAPTDEDCNGSF-------------TLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAI-GAFISS

Query:  VKRFHYENPKLKGSIEDCSWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLA--SWPPTKI
        +KRF YE  ++K   EDC+W MYEYTL+P  VP+G  HDSYVLC IRK+IVK+ +  + +  +  +  +WP T +
Subjt:  VKRFHYENPKLKGSIEDCSWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLA--SWPPTKI

XP_038880323.1 NAC domain-containing protein 96-like [Benincasa hispida]2.0e-4254.12Show/hide
Query:  GIVFAPTDED---------CNGSF----TLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAIGAFISSV
        G  F+PTDE+           G F     L V+DLY +EPS +WQ  GGIDGQD + FT L KKKSR++RKV SNGATWSGENKA  VFS    A I SV
Subjt:  GIVFAPTDED---------CNGSF----TLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAIGAFISSV

Query:  KRFHYENPKLKGSIEDCSWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQP--LASWP
        KRFHYEN K+K + ++ SW MYEYTL P FVPKG  HDS+VLCK+R +I+K  ++ + T +Q     +WP
Subjt:  KRFHYENPKLKGSIEDCSWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQP--LASWP

TrEMBL top hitse value%identityAlignment
A0A1S3B8F1 NAC domain-containing protein 105-like4.9e-4250.82Show/hide
Query:  GIVFAPTDEDCNGSF-------------TLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAIG-AFISS
        G  F PTDE+  G +              LPV+DLY  EPS +WQ  GG+D QD + FTTL KKKSRI+RKV SNG TWS EN+A +VFS  I    + S
Subjt:  GIVFAPTDEDCNGSF-------------TLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAIG-AFISS

Query:  VKRFHYENPKLKG--SIEDCSWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLAS-WPPTKISSSTNTN
        VKRFHY+ PK K    I DC+W MYEYTLDP+ VPKG  HDSYVLC IRK+IVK+ +  + +  + ++S WP T +     T+
Subjt:  VKRFHYENPKLKG--SIEDCSWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLAS-WPPTKISSSTNTN

A0A5A7TSB0 NAC domain-containing protein 105-like protein1.1e-3655.86Show/hide
Query:  GIVFAPTDEDCNGSF-------------TLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAIG-AFISS
        G  F PTDE+  G +              LPV+DLY  EPS +WQ  GG+D QD + FTTL KKKSRI+RKV SNG TWS EN+A +VFS  I    + S
Subjt:  GIVFAPTDEDCNGSF-------------TLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAIG-AFISS

Query:  VKRFHYENPKLKG--SIEDCSWTMYEYTLDPAFVPKGKAHDSYVL
        VKRFHY+ PK K    I DC+W MYEYTLDP+ VPKG  HDSYVL
Subjt:  VKRFHYENPKLKG--SIEDCSWTMYEYTLDPAFVPKGKAHDSYVL

A0A5A7UPM7 NAC domain-containing protein 105-like protein5.3e-3651.61Show/hide
Query:  GIVFAPTDED---------CNGSF----TLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAIGAFISSV
        G  F PTDE+           G F     LPV+D+YTQEP  +W+  GG++G+D   FTTL K+KSRI+RKV SNGA WSGE+KAT+VFS      + + 
Subjt:  GIVFAPTDED---------CNGSF----TLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAIGAFISSV

Query:  KRFHYENPKLKGSIEDC----SWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVK
        KRFHYEN K+   ++DC    SW MYEYTL P  VP+G  HDS+VLC +RK+I+K
Subjt:  KRFHYENPKLKGSIEDC----SWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVK

A0A6J1F2C3 NAC domain-containing protein 12-like1.5e-3850Show/hide
Query:  YGIVFAPTDE-------------DCNGSFTLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAIGAFISS
        +G  FAPTDE             D   S +LPV+D+Y+ EP+++WQ  GG++ +D + FTTL KKKSRI+RKV  NG TWSGE+K  +VFS A  A I +
Subjt:  YGIVFAPTDE-------------DCNGSFTLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAIGAFISS

Query:  VKRFHYE-NPKLKGSIEDCSWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQ
        +KRFHYE +  +  + +DCSW M+EYTLDP  +  G  HDSYV+C IRKRI+K VR  V + +Q
Subjt:  VKRFHYE-NPKLKGSIEDCSWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQ

A0A6J1F881 NAC domain-containing protein 96-like3.1e-3650Show/hide
Query:  GIVFAPTDEDC------------NGSFTLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVF-SEAIGAFISSV
        G VF PTD++             +  + LPVVDLY++EPS+LWQ +GGID Q    FT L KKKSR++RKV SNG TWSGE+ A ++F S+     + ++
Subjt:  GIVFAPTDEDC------------NGSFTLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVF-SEAIGAFISSV

Query:  KRFHYENPKLKGSIEDCSWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIV
        KRFHYEN K++ S E+CSW M+EYT++P  VP G  HD +V CKIR +I+
Subjt:  KRFHYENPKLKGSIEDCSWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACCGTCAGTACGGCATCGTCTTCGCTCCGACCGACGAGGATTGCAATGGTTCATTTACTCTACCCGTGGTTGACCTCTACACCCAAGAACCTTCTCTCCTATGGCA
ACCATTTGGAGGGATTGATGGTCAAGACTTCTTTTGTTTCACCACACTCAACAAGAAGAAATCGCGTATCGTCCGAAAGGTTGCCTCCAACGGCGCTACTTGGAGCGGTG
AAAACAAAGCAACCCGAGTATTTTCCGAGGCTATCGGTGCCTTTATCAGTAGTGTCAAACGCTTTCATTACGAGAATCCTAAACTCAAAGGTAGCATCGAGGATTGTTCT
TGGACCATGTACGAGTACACTCTCGATCCCGCCTTTGTACCAAAAGGGAAAGCACATGATTCGTATGTACTTTGCAAGATTCGAAAAAGAATTGTGAAAACAGTGAGGAA
AGGAGTTCCAACATTTGTACAACCATTGGCTTCTTGGCCGCCTACAAAGATCAGTTCCAGCACCAACACAAACATTGGCTTCTTCTCGGCCTACGACATCGATGGAAGTA
TACGAACAGAATCACCCCATTCCAGCCGAGATGGAGAATTACGACCCAAATATGACATTTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTACCGTCAGTACGGCATCGTCTTCGCTCCGACCGACGAGGATTGCAATGGTTCATTTACTCTACCCGTGGTTGACCTCTACACCCAAGAACCTTCTCTCCTATGGCA
ACCATTTGGAGGGATTGATGGTCAAGACTTCTTTTGTTTCACCACACTCAACAAGAAGAAATCGCGTATCGTCCGAAAGGTTGCCTCCAACGGCGCTACTTGGAGCGGTG
AAAACAAAGCAACCCGAGTATTTTCCGAGGCTATCGGTGCCTTTATCAGTAGTGTCAAACGCTTTCATTACGAGAATCCTAAACTCAAAGGTAGCATCGAGGATTGTTCT
TGGACCATGTACGAGTACACTCTCGATCCCGCCTTTGTACCAAAAGGGAAAGCACATGATTCGTATGTACTTTGCAAGATTCGAAAAAGAATTGTGAAAACAGTGAGGAA
AGGAGTTCCAACATTTGTACAACCATTGGCTTCTTGGCCGCCTACAAAGATCAGTTCCAGCACCAACACAAACATTGGCTTCTTCTCGGCCTACGACATCGATGGAAGTA
TACGAACAGAATCACCCCATTCCAGCCGAGATGGAGAATTACGACCCAAATATGACATTTACTGA
Protein sequenceShow/hide protein sequence
MYRQYGIVFAPTDEDCNGSFTLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAIGAFISSVKRFHYENPKLKGSIEDCS
WTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLASWPPTKISSSTNTNIGFFSAYDIDGSIRTESPHSSRDGELRPKYDIY