; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0016652 (gene) of Chayote v1 genome

Gene IDSed0016652
OrganismSechium edule (Chayote v1)
DescriptionCyclin-dependent protein kinase inhibitor SMR3-like
Genome locationLG14:4801930..4802805
RNA-Seq ExpressionSed0016652
SyntenySed0016652
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595321.1 Cyclin-dependent protein kinase inhibitor SMR3, partial [Cucurbita argyrosperma subsp. sororia]1.3e-3563.89Show/hide
Query:  MASQFQEISLTPESFCAESEDPNQIDFIFASESQQQVIRRFDSVHGASSEES--ISTVDDCNDGFRTPTSSDFKIPVVKRCPPAPRRRKQISVSRTSSPR
        MASQF+EISLTPESF  + ED +QI+FIFA E++            ++ EES  IS VDD  DG RTPTSSD+KIP+V+ CPPAPRR K +S+SRT SPR
Subjt:  MASQFQEISLTPESFCAESEDPNQIDFIFASESQQQVIRRFDSVHGASSEES--ISTVDDCNDGFRTPTSSDFKIPVVKRCPPAPRRRKQISVSRTSSPR

Query:  VSGVRRGFRLFISDEIVESIFSASFGSDLLRQRNKKARSDDNHG
        VSGVRRGFR++ISDEIV+SIFS+SFGSD L+ +NKK+R DD HG
Subjt:  VSGVRRGFRLFISDEIVESIFSASFGSDLLRQRNKKARSDDNHG

XP_022143885.1 cyclin-dependent protein kinase inhibitor SMR2-like [Momordica charantia]3.0e-2757.79Show/hide
Query:  MASQFQEISL-----------TPESFCAESEDP-NQIDFIFASESQQQVIRRFDSVHGASSEESISTVDDCNDGFRTPTSSDFKIPVVKRCPPAPRRRKQ
        MAS FQEISL           +PESF    ED  NQIDF+FA  + QQ  RR DS+          + DD  DGFRTPTSSD KIPV+K+CPPAPRR K 
Subjt:  MASQFQEISL-----------TPESFCAESEDP-NQIDFIFASESQQQVIRRFDSVHGASSEESISTVDDCNDGFRTPTSSDFKIPVVKRCPPAPRRRKQ

Query:  ISV-SRTSSPRV-SGVRRGFRLFISDEIVESIFSASFGSDLLRQRNKKARSDDN
        IS  SR SSPR+ SGVRRGFR++ISDEIVESIFS+SF      Q+ KKAR DD+
Subjt:  ISV-SRTSSPRV-SGVRRGFRLFISDEIVESIFSASFGSDLLRQRNKKARSDDN

XP_022950456.1 uncharacterized protein LOC111453550 [Cucurbita moschata]5.8e-2354.14Show/hide
Query:  MASQFQEIS------------LTPESFCAESED-PNQIDFIFASESQQQVIRRFDSVHGASSEESISTVDDCNDGFRTPTSSDFKIPVVKRCPPAPRRRK
        MAS FQEIS             TP+SF     D  NQIDFIFA      +     SV    S    S  DD +DGFRTPTSSD KIPVV++CPPAPRR K
Subjt:  MASQFQEIS------------LTPESFCAESED-PNQIDFIFASESQQQVIRRFDSVHGASSEESISTVDDCNDGFRTPTSSDFKIPVVKRCPPAPRRRK

Query:  QISVSRTSSPRVSGVRRGFRLFISDEIVESIFSASFGSDLLRQRNKKARSDDNHGGE
         IS SRT  PR SGVRRGFR++ISDEI +SIF      DLL Q+ KKAR + N GGE
Subjt:  QISVSRTSSPRVSGVRRGFRLFISDEIVESIFSASFGSDLLRQRNKKARSDDNHGGE

XP_023518540.1 uncharacterized protein LOC111782016 [Cucurbita pepo subsp. pepo]1.2e-3965.77Show/hide
Query:  MASQFQEISLTPESFCAESEDPNQIDFIFASESQQQVIRRFDSVHGASSEES--ISTVDDCNDGFRTPTSSDFKIPVVKRCPPAPRRRKQISVSRTSSPR
        MASQF+EISLTPESF  + ED +QI+FIFA E++   +        ++ EES  IS VDD  DGFRTPTSSD+KIP+V+ CPPAPRR K IS+SRT SPR
Subjt:  MASQFQEISLTPESFCAESEDPNQIDFIFASESQQQVIRRFDSVHGASSEES--ISTVDDCNDGFRTPTSSDFKIPVVKRCPPAPRRRKQISVSRTSSPR

Query:  VSGVRRGFRLFISDEIVESIFSASFGSDLLRQRNKKARSDDNHGGEIKL
        VSGVRRGFR++ISDEIV+SIFS+SFGSD L+ +NKKAR DD HGG++KL
Subjt:  VSGVRRGFRLFISDEIVESIFSASFGSDLLRQRNKKARSDDNHGGEIKL

XP_038877666.1 cyclin-dependent protein kinase inhibitor SMR3-like [Benincasa hispida]3.5e-2856.86Show/hide
Query:  MASQFQEISLT-PE--SFCAESEDP----NQIDFIFASESQQQVIRRFDSVHGASSEESISTVDDCNDGFRTPTSSDFKIPVVKRCPPAPRRRKQISVSR
        MAS+FQEISLT P+  SF A +  P    NQIDFIF+  ++   +         +  ESIS VDD +DGFRTP SSD KIPVV+ CPPAP+R K IS+SR
Subjt:  MASQFQEISLT-PE--SFCAESEDP----NQIDFIFASESQQQVIRRFDSVHGASSEESISTVDDCNDGFRTPTSSDFKIPVVKRCPPAPRRRKQISVSR

Query:  TSSPRVSGVRRGFRLFISDEIVESIFSASFGSDLLRQRNKK--ARSDDNHGGE
        TSS R SGVRRGFR++ISDEIV+SIF     SDLL Q++KK   + DD++GGE
Subjt:  TSSPRVSGVRRGFRLFISDEIVESIFSASFGSDLLRQRNKK--ARSDDNHGGE

TrEMBL top hitse value%identityAlignment
A0A0A0KZJ9 Uncharacterized protein2.9e-2050.32Show/hide
Query:  MASQFQEISLTPESFCAESED---PNQIDFIFASESQQQVIRRFDSVHGASSEE----SISTVDD---CNDGFRTPTSSDFKIPVVKRCPPAPRRRKQIS
        MAS+FQEIS  P             + IDF+F S S              S ++    SIS VDD    NDGF TP SS  KIPV+  CPPAP R K IS
Subjt:  MASQFQEISLTPESFCAESED---PNQIDFIFASESQQQVIRRFDSVHGASSEE----SISTVDD---CNDGFRTPTSSDFKIPVVKRCPPAPRRRKQIS

Query:  VSRTSSPRVSGVRRGFRLFISDEIVESIFSASFGSDLLRQRN-KKARSDDNHGGE
        +SRT SPR SGVRRGF ++ISD+IV+SIFS     DLL Q++ KKAR DD++GGE
Subjt:  VSRTSSPRVSGVRRGFRLFISDEIVESIFSASFGSDLLRQRN-KKARSDDNHGGE

A0A2Z7D474 Uncharacterized protein1.4e-0940.16Show/hide
Query:  SEDPNQIDFIFASESQQQVIRRFDSVHGASSEESI----STVDDCNDGFRTPTSSDFKIPVVKRCPPAPR--RRKQISVSRTSSPRVSGVRRGFRLFISD
        SEDP +I     + +Q++       V     +E+       VD+ +DGFRTPTS+D KIPV  +CPPAPR  R +Q  V R +SP  S  RR  +L  + 
Subjt:  SEDPNQIDFIFASESQQQVIRRFDSVHGASSEESI----STVDDCNDGFRTPTSSDFKIPVVKRCPPAPR--RRKQISVSRTSSPRVSGVRRGFRLFISD

Query:  EIVESIFSASFGSDLLRQRNKKARSDD
        + VESIF       +  Q+ KKAR DD
Subjt:  EIVESIFSASFGSDLLRQRNKKARSDD

A0A5A7SN91 Cyclin-dependent protein kinase inhibitor SMR3-like1.4e-1948.08Show/hide
Query:  MASQFQEISLTPESFCAESEDP----NQIDFIFASESQQ-----QVIRRFDSVHGASSEESISTVDD---CNDGFRTPTSSDFKIPVVKRCPPAPRRRKQ
        M S+FQEIS  P     + +      + IDF+F S S        +    DS+       SIS VDD    +DGF TP SS  KIPV+  CPPAP R K 
Subjt:  MASQFQEISLTPESFCAESEDP----NQIDFIFASESQQ-----QVIRRFDSVHGASSEESISTVDD---CNDGFRTPTSSDFKIPVVKRCPPAPRRRKQ

Query:  ISVSRTSSPRVSGVRRGFRLFISDEIVESIFSASFGSDLLRQRNKKARSDDNHGGE
        IS+SRT S R S VRRGF ++ISDEIV+SIFS     DLL  ++KKAR DD++GGE
Subjt:  ISVSRTSSPRVSGVRRGFRLFISDEIVESIFSASFGSDLLRQRNKKARSDDNHGGE

A0A6J1CQ22 cyclin-dependent protein kinase inhibitor SMR2-like1.4e-2757.79Show/hide
Query:  MASQFQEISL-----------TPESFCAESEDP-NQIDFIFASESQQQVIRRFDSVHGASSEESISTVDDCNDGFRTPTSSDFKIPVVKRCPPAPRRRKQ
        MAS FQEISL           +PESF    ED  NQIDF+FA  + QQ  RR DS+          + DD  DGFRTPTSSD KIPV+K+CPPAPRR K 
Subjt:  MASQFQEISL-----------TPESFCAESEDP-NQIDFIFASESQQQVIRRFDSVHGASSEESISTVDDCNDGFRTPTSSDFKIPVVKRCPPAPRRRKQ

Query:  ISV-SRTSSPRV-SGVRRGFRLFISDEIVESIFSASFGSDLLRQRNKKARSDDN
        IS  SR SSPR+ SGVRRGFR++ISDEIVESIFS+SF      Q+ KKAR DD+
Subjt:  ISV-SRTSSPRV-SGVRRGFRLFISDEIVESIFSASFGSDLLRQRNKKARSDDN

A0A6J1GEW0 uncharacterized protein LOC1114535502.8e-2354.14Show/hide
Query:  MASQFQEIS------------LTPESFCAESED-PNQIDFIFASESQQQVIRRFDSVHGASSEESISTVDDCNDGFRTPTSSDFKIPVVKRCPPAPRRRK
        MAS FQEIS             TP+SF     D  NQIDFIFA      +     SV    S    S  DD +DGFRTPTSSD KIPVV++CPPAPRR K
Subjt:  MASQFQEIS------------LTPESFCAESED-PNQIDFIFASESQQQVIRRFDSVHGASSEESISTVDDCNDGFRTPTSSDFKIPVVKRCPPAPRRRK

Query:  QISVSRTSSPRVSGVRRGFRLFISDEIVESIFSASFGSDLLRQRNKKARSDDNHGGE
         IS SRT  PR SGVRRGFR++ISDEI +SIF      DLL Q+ KKAR + N GGE
Subjt:  QISVSRTSSPRVSGVRRGFRLFISDEIVESIFSASFGSDLLRQRNKKARSDDNHGGE

SwissProt top hitse value%identityAlignment
O80930 Cyclin-dependent protein kinase inhibitor SMR126.3e-0451.35Show/hide
Query:  EESISTVDDCNDGFRTPTSSDFKIPVVKRCPPAPRRR
        EE    V++ NDGF+TPT  + +IP+V+ CPPAP +R
Subjt:  EESISTVDDCNDGFRTPTSSDFKIPVVKRCPPAPRRR

Arabidopsis top hitse value%identityAlignment
AT1G08180.1 unknown protein6.4e-0444.64Show/hide
Query:  TPTSSDFKIPVVKRCPPAPRRRKQISVSRTSSPRVSGVRRGFRLF-ISDEIVESIF
        TPTSSD KIP V+ CPP PR+R +  +S T   R+S   R F    +  + VE++F
Subjt:  TPTSSDFKIPVVKRCPPAPRRRKQISVSRTSSPRVSGVRRGFRLF-ISDEIVESIF

AT2G37610.1 unknown protein4.5e-0551.35Show/hide
Query:  EESISTVDDCNDGFRTPTSSDFKIPVVKRCPPAPRRR
        EE    V++ NDGF+TPT  + +IP+V+ CPPAP +R
Subjt:  EESISTVDDCNDGFRTPTSSDFKIPVVKRCPPAPRRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCGCAATTCCAAGAAATCTCCCTCACGCCGGAATCATTCTGCGCCGAATCGGAAGATCCAAACCAGATCGACTTCATCTTCGCATCGGAATCTCAACAACAAGT
GATTCGCCGTTTCGATTCCGTCCACGGAGCTTCATCGGAAGAGTCCATCTCCACCGTGGATGACTGCAACGACGGTTTCAGAACGCCGACCTCCTCCGATTTCAAGATTC
CGGTGGTGAAACGCTGTCCTCCGGCGCCTAGACGGCGGAAGCAGATCTCGGTGTCGAGAACGTCGTCGCCGAGAGTTTCCGGCGTTCGTAGAGGTTTTCGACTCTTTATC
TCCGATGAAATCGTTGAATCGATCTTCTCTGCGAGTTTCGGCTCTGATTTGCTGCGCCAGAGGAATAAGAAAGCTCGGTCGGACGACAATCATGGCGGTGAAATTAAACT
GTGA
mRNA sequenceShow/hide mRNA sequence
CTCCATTGTCGCCATCATCATGGCCTCGCAATTCCAAGAAATCTCCCTCACGCCGGAATCATTCTGCGCCGAATCGGAAGATCCAAACCAGATCGACTTCATCTTCGCAT
CGGAATCTCAACAACAAGTGATTCGCCGTTTCGATTCCGTCCACGGAGCTTCATCGGAAGAGTCCATCTCCACCGTGGATGACTGCAACGACGGTTTCAGAACGCCGACC
TCCTCCGATTTCAAGATTCCGGTGGTGAAACGCTGTCCTCCGGCGCCTAGACGGCGGAAGCAGATCTCGGTGTCGAGAACGTCGTCGCCGAGAGTTTCCGGCGTTCGTAG
AGGTTTTCGACTCTTTATCTCCGATGAAATCGTTGAATCGATCTTCTCTGCGAGTTTCGGCTCTGATTTGCTGCGCCAGAGGAATAAGAAAGCTCGGTCGGACGACAATC
ATGGCGGTGAAATTAAACTGTGATGCCGACGAGGTTTTCCAGAGAGAATAACTCCGATGAAATCGTCTAGAGATTCCGGCGTCTGCAGAGGTTTCCGAGTCTATATTTGG
AACGAAATTGTTGAATCGATCTTCTCGTCAAGTTTTGGTTCCGATTTGCTACGCCAGATCAGGAACGAGGAAAGCTAGAACGGACGATAACAATGGCGGTGAAATTAATT
TATGATGCTGAGGTTTATCAGAGTGAATAACTCCGATGAAATCATTGAGAGTTGCCGGCATTCGCAGAGGTTTCCAAGTCTATATCTCGGAGGAAATCGTTGAATCGATC
TTCTCTTCCAGTTTCGGCTCCGATTTTCTGCACCAGAGGAACAAGAAAGCTCGGACGGACGATAATCATGGCGGTGAAATTAAACTACGACGCCGAGGTTTTTCAG
Protein sequenceShow/hide protein sequence
MASQFQEISLTPESFCAESEDPNQIDFIFASESQQQVIRRFDSVHGASSEESISTVDDCNDGFRTPTSSDFKIPVVKRCPPAPRRRKQISVSRTSSPRVSGVRRGFRLFI
SDEIVESIFSASFGSDLLRQRNKKARSDDNHGGEIKL