| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0037369.1 pol protein [Cucumis melo var. makuwa] | 5.5e-224 | 56.57 | Show/hide |
Query: MDMMDRVFKVFLDRFVIVFIDDILVYSKSKEDHASHLRQILSALRENQLYAKFSKCDFWQEVVAFLGHVVSKERVVMDPSKIEAVSSWARPTTVSEIRSF
MD+M+R+FK FLD FVIVFIDDIL+YSK++ +H HL Q+L LR N+LYAKFSKC+FW V FLGHVVS E V +DP+KIEAV++W RP+TVSEIRSF
Subjt: MDMMDRVFKVFLDRFVIVFIDDILVYSKSKEDHASHLRQILSALRENQLYAKFSKCDFWQEVVAFLGHVVSKERVVMDPSKIEAVSSWARPTTVSEIRSF
Query: LGLAGYYYPFVRNFSAIASPLTRLMRKGVDFVWDEKCDESFAKLKSSLTSAPVLVVSRGTGGFVVYSDASKFGLGCVLMQHGKVIAYASRQLKPHEQNYP
LGLAGYY FV +FS IA+PLT+L RKG+ FVW C+ SF +LK L +APVL V G+G FV+YSDASK GLGCVLMQ GKV+AYASRQLK HEQNYP
Subjt: LGLAGYYYPFVRNFSAIASPLTRLMRKGVDFVWDEKCDESFAKLKSSLTSAPVLVVSRGTGGFVVYSDASKFGLGCVLMQHGKVIAYASRQLKPHEQNYP
Query: THDMELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDVNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKTSHFATL---------------
THD+ELAAVVFALKIWRHYLYGEKIQI++DH+SLKYFFTQK++NMRQRRWLELVKDYDCEILYHPGKANVVADALSRK +H A L
Subjt: THDMELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDVNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKTSHFATL---------------
Query: --------------------------------------------------SNPRNGDLRYKGRLCVPAEAGIRTELLTEAHTSPFAWHPGVT--------
S + L ++GRLCVP ++ I+TELLTEAH+SPF HPG T
Subjt: --------------------------------------------------SNPRNGDLRYKGRLCVPAEAGIRTELLTEAHTSPFAWHPGVT--------
Query: -------------WGAAVEVGGDYHGIYLGSAQDTQRLCTNLGDRRQVDQ-EPDWAQSAAIVP-----------------------------PST-----
+ + VEVG G Y G+AQD + L +LG RQ + P A+ + P T
Subjt: -------------WGAAVEVGGDYHGIYLGSAQDTQRLCTNLGDRRQVDQ-EPDWAQSAAIVP-----------------------------PST-----
Query: -----LRPMVR------QSGWDQYLYLMEFAYNNSYQVTIQMAPFEALYGKRCRSPVFWEEVGDRKVLGPELLQLTNEAVQKIRARMLTAQNRQKSYADV
L M+R WD +L+LMEFAYNNSYQ TI MAPFEALYGK CRSPV W EVG++++LGPEL+Q TN A+QKI ARMLTAQ+RQKSYADV
Subjt: -----LRPMVR------QSGWDQYLYLMEFAYNNSYQVTIQMAPFEALYGKRCRSPVFWEEVGDRKVLGPELLQLTNEAVQKIRARMLTAQNRQKSYADV
Query: RRRELEFEVGQHVFLKVASMRGVLRFGKKGKLSPRFVGPFEILERVGAVAYRLALPPSLAVVHSVFHVSMLCRYVADPSHIIDFEPLQLNSDMSFEGKPL
RR++LEFEVG VFLKVA M+GVLRF KKGKLSPRFVGPFEILER+G VAYRLALPPS A VH VFH+SML +YVADP+H++DF PLQ++ ++S+E +P+
Subjt: RRRELEFEVGQHVFLKVASMRGVLRFGKKGKLSPRFVGPFEILERVGAVAYRLALPPSLAVVHSVFHVSMLCRYVADPSHIIDFEPLQLNSDMSFEGKPL
Query: EILAFEKKVLRNRAIDLVKVQWRNQVVEEATWELEGEMRRNYPELF
EI+A E K LR+R I LVKV W+N VEEATWE E MR YPELF
Subjt: EILAFEKKVLRNRAIDLVKVQWRNQVVEEATWELEGEMRRNYPELF
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| KAA0050197.1 pol protein [Cucumis melo var. makuwa] | 1.3e-217 | 56.87 | Show/hide |
Query: MDMMDRVFKVFLDRFVIVFIDDILVYSKSKEDHASHLRQILSALRENQLYAKFSKCDFWQEVVAFLGHVVSKERVVMDPSKIEAVSSWARPTTVSEIRSF
MD+M+RVFK FLD FVIVFIDDIL+YSK++ +H HL Q+L LR N+LYAKFSKC+FW + V+FLGHVVS E V DP+KIEAV++W R +TV+EIRSF
Subjt: MDMMDRVFKVFLDRFVIVFIDDILVYSKSKEDHASHLRQILSALRENQLYAKFSKCDFWQEVVAFLGHVVSKERVVMDPSKIEAVSSWARPTTVSEIRSF
Query: LGLAGYYYPFVRNFSAIASPLTRLMRKGVDFVWDEKCDESFAKLKSSLTSAPVLVVSRGTGGFVVYSDASKFGLGCVLMQHGKVIAYASRQLKPHEQNYP
LGLA YY FV +FS IASPLT+L RKG FVW C+ SF +LK L +APVL V G+ FV+YSDASK GLGCV+MQ GKV+AYASRQLK HEQNYP
Subjt: LGLAGYYYPFVRNFSAIASPLTRLMRKGVDFVWDEKCDESFAKLKSSLTSAPVLVVSRGTGGFVVYSDASKFGLGCVLMQHGKVIAYASRQLKPHEQNYP
Query: THDMELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDVNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKTSHFATLSNPR-----------
THD+ELAAVVFALKIWRHYLYGEKI IF+DH+SLKYFFTQK+ NMRQRRWLELVKDYDCEILYHPGKANVVADALS K +H A L +
Subjt: THDMELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDVNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKTSHFATLSNPR-----------
Query: ------------------------NGDLRYKGRLCVPAEAGIRTELLTEAHTSPFAWHPGVTWGAAVEVGGDYHGIY-----LGSAQDTQRLCTNLGDRR
+ L ++GRLCVP ++ ++TELL EAH+SPF HPG T ++ D +Y D C +
Subjt: ------------------------NGDLRYKGRLCVPAEAGIRTELLTEAHTSPFAWHPGVTWGAAVEVGGDYHGIY-----LGSAQDTQRLCTNLGDRR
Query: QVDQEP-------------------------DW---------------AQSAAIVP------------------PST----------LRPMVR------Q
Q P W +SA VP P T L M+R
Subjt: QVDQEP-------------------------DW---------------AQSAAIVP------------------PST----------LRPMVR------Q
Query: SGWDQYLYLMEFAYNNSYQVTIQMAPFEALYGKRCRSPVFWEEVGDRKVLGPELLQLTNEAVQKIRARMLTAQNRQKSYADVRRRELEFEVGQHVFLKVA
WD L+LMEFAYNNSYQ TI MAPFEALYGK CRSPV W EVG++++LGPEL+Q TN A+QKIRARMLTAQNRQKSYA+VRR++LEFEVG VFLKVA
Subjt: SGWDQYLYLMEFAYNNSYQVTIQMAPFEALYGKRCRSPVFWEEVGDRKVLGPELLQLTNEAVQKIRARMLTAQNRQKSYADVRRRELEFEVGQHVFLKVA
Query: SMRGVLRFGKKGKLSPRFVGPFEILERVGAVAYRLALPPSLAVVHSVFHVSMLCRYVADPSHIIDFEPLQLNSDMSFEGKPLEILAFEKKVLRNRAIDLV
M+GVLRF KKGKLSPRFVGPFEILER+G VAYRLALPPSL+ VH+VFHVSML RYVAD +H++DFEPLQ++ ++S+E +P+EILA E K LR+R I LV
Subjt: SMRGVLRFGKKGKLSPRFVGPFEILERVGAVAYRLALPPSLAVVHSVFHVSMLCRYVADPSHIIDFEPLQLNSDMSFEGKPLEILAFEKKVLRNRAIDLV
Query: KVQWRNQVVEEATWELEGEMRRNYPELF
KV WRN VEEATWE E +MR YPELF
Subjt: KVQWRNQVVEEATWELEGEMRRNYPELF
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| KAA0063718.1 pol protein [Cucumis melo var. makuwa] | 1.7e-217 | 54.22 | Show/hide |
Query: MDMMDRVFKVFLDRFVIVFIDDILVYSKSKEDHASHLRQILSALRENQLYAKFSKCDFWQEVVAFLGHVVSKERVVMDPSKIEAVSSWARPTTVSEIRSF
MD+M+RVF+ FLD FVIVFIDDIL+YSK++ +H HLR +L LR+N+LYAKFSKC+FW + V+FLGHVVSK V +DP+KIEAV+ W RP+TVSE+RSF
Subjt: MDMMDRVFKVFLDRFVIVFIDDILVYSKSKEDHASHLRQILSALRENQLYAKFSKCDFWQEVVAFLGHVVSKERVVMDPSKIEAVSSWARPTTVSEIRSF
Query: LGLAGYYYPFVRNFSAIASPLTRLMRKGVDFVWDEKCDESFAKLKSSLTSAPVLVVSRGTGGFVVYSDASKFGLGCVLMQHGKVIAYASRQLKPHEQNYP
LGLAGYY FV NFS IA+PLT+L RK FVW + C++SF LK L +APVL V G+G FV+YSDASK GL CVLMQ GKV+AYASRQLK HEQNYP
Subjt: LGLAGYYYPFVRNFSAIASPLTRLMRKGVDFVWDEKCDESFAKLKSSLTSAPVLVVSRGTGGFVVYSDASKFGLGCVLMQHGKVIAYASRQLKPHEQNYP
Query: THDMELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDVNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKTSHFATL---------------
THD+ELAAVVFALKIWRHYLYGEKIQIF+DH+SLKYFFTQK++NMRQRRWLELVKDYDCEILYHPGKANVVADALSRK SH A L
Subjt: THDMELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDVNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKTSHFATL---------------
Query: --------------------------------------------------SNPRNGDLRYKGRLCVPAEAGIRTELLTEAHTSPFAWHPGVTWGAAVEVG
S +G L ++ RLCVP+++ ++TELL+EAH+SPF+ HPG T ++
Subjt: --------------------------------------------------SNPRNGDLRYKGRLCVPAEAGIRTELLTEAHTSPFAWHPGVTWGAAVEVG
Query: GDYHGIYLGSAQDTQRLCTNLGDRRQVDQE-----------------PDW------------------------------AQSAAIVPPST---------
D +Y ++ +R R V Q+ P+W +SA VP +
Subjt: GDYHGIYLGSAQDTQRLCTNLGDRRQVDQE-----------------PDW------------------------------AQSAAIVPPST---------
Query: --LRPMVRQSG---------------------WDQYLYLMEFAYNNSYQVTIQMAPFEALYGKRCRSPVFWEEVGDRKVLGPELLQLTNEAVQKIRARML
+ +VR G WD +L+LMEFAYNNSYQ TI MAPFEALYGK CRSPV W EVG+++++GPEL+Q TNEA+QKIR+RM
Subjt: --LRPMVRQSG---------------------WDQYLYLMEFAYNNSYQVTIQMAPFEALYGKRCRSPVFWEEVGDRKVLGPELLQLTNEAVQKIRARML
Query: TAQNRQKSYADVRRRELEFEVGQHVFLKVASMRGVLRFGKKGKLSPRFVGPFEILERVGAVAYRLALPPSLAVVHSVFHVSMLCRYVADPSHIIDFEPLQ
TAQ+RQKSYADVRR++LEFEVG VFLKVA MRGVLRF +KGKLSPRFVGPFEILER+G VAYRLALPPSL+ VH VFHVSML +YV DPSH++D++PL+
Subjt: TAQNRQKSYADVRRRELEFEVGQHVFLKVASMRGVLRFGKKGKLSPRFVGPFEILERVGAVAYRLALPPSLAVVHSVFHVSMLCRYVADPSHIIDFEPLQ
Query: LNSDMSFEGKPLEILAFEKKVLRNRAIDLVKVQWRNQVVEEATWELEGEMRRNYPELF
++ ++S+ +P E+LA E K LRN+ I LVKV WRN VEEATWE E +MR YPELF
Subjt: LNSDMSFEGKPLEILAFEKKVLRNRAIDLVKVQWRNQVVEEATWELEGEMRRNYPELF
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| KAA0063793.1 pol protein [Cucumis melo var. makuwa] | 6.9e-219 | 54.16 | Show/hide |
Query: MDMMDRVFKVFLDRFVIVFIDDILVYSKSKEDHASHLRQILSALRENQLYAKFSKCDFWQEVVAFLGHVVSKERVVMDPSKIEAVSSWARPTTVSEIRSF
MD+M+RVFK FLD FVIVFIDDIL+YSK++ +H HL Q+L LR N+LYAKFSKC+FW V FLGHVVS E V +DP+KIEAV++W RP+TVSEIRSF
Subjt: MDMMDRVFKVFLDRFVIVFIDDILVYSKSKEDHASHLRQILSALRENQLYAKFSKCDFWQEVVAFLGHVVSKERVVMDPSKIEAVSSWARPTTVSEIRSF
Query: LGLAGYYYPFVRNFSAIASPLTRLMRKGVDFVWDEKCDESFAKLKSSLTSAPVLVVSRGTGGFVVYSDASKFGLGCVLMQHGKVIAYASRQLKPHEQNYP
LGLAGYY FV +FS IASPLT+L RKG FVW C+ SF +LK L +APVL V G+G FV+YSDASK GLGCVLMQ GKV+AYASRQLK HEQNYP
Subjt: LGLAGYYYPFVRNFSAIASPLTRLMRKGVDFVWDEKCDESFAKLKSSLTSAPVLVVSRGTGGFVVYSDASKFGLGCVLMQHGKVIAYASRQLKPHEQNYP
Query: THDMELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDVNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKTSHFATL---------------
THD+ELAAVVFALKIWRHYLYGEKIQI++DH+SLKYFFTQK++NMRQRRWLELVKDYDCEILYHPGKANVVADALSRK +H A L
Subjt: THDMELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDVNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKTSHFATL---------------
Query: --------------------------------------------------SNPRNGDLRYKGRLCVPAEAGIRTELLTEAHTSPFAWHPGVT--------
S + L ++GRLCVP + ++TELLTEAH+SPF HPG T
Subjt: --------------------------------------------------SNPRNGDLRYKGRLCVPAEAGIRTELLTEAHTSPFAWHPGVT--------
Query: --WGAAVE--------------------------------VGGDYHGIYL----GSAQDTQRLCTNLGDRRQVDQEPDWAQ-------------------
W ++ G + + + G QD + L +LG RQ + +
Subjt: --WGAAVE--------------------------------VGGDYHGIYL----GSAQDTQRLCTNLGDRRQVDQEPDWAQ-------------------
Query: -----------SAAIVPPS---------TLRPMVR------QSGWDQYLYLMEFAYNNSYQVTIQMAPFEALYGKRCRSPVFWEEVGDRKVLGPELLQLT
S A P + L M+R WD +L+LMEFAYNNSYQ TI MAPFEALYGK CRSPV W EVG++++LGPEL+Q T
Subjt: -----------SAAIVPPS---------TLRPMVR------QSGWDQYLYLMEFAYNNSYQVTIQMAPFEALYGKRCRSPVFWEEVGDRKVLGPELLQLT
Query: NEAVQKIRARMLTAQNRQKSYADVRRRELEFEVGQHVFLKVASMRGVLRFGKKGKLSPRFVGPFEILERVGAVAYRLALPPSLAVVHSVFHVSMLCRYVA
N A+QKIRARMLTAQ+RQKSYADVRR++LEFEVG VFLKVA M+GV+RF KKGKLSPRFVGPFEILER+G VAYRLALPPS A VH VFH+SML +YVA
Subjt: NEAVQKIRARMLTAQNRQKSYADVRRRELEFEVGQHVFLKVASMRGVLRFGKKGKLSPRFVGPFEILERVGAVAYRLALPPSLAVVHSVFHVSMLCRYVA
Query: DPSHIIDFEPLQLNSDMSFEGKPLEILAFEKKVLRNRAIDLVKVQWRNQVVEEATWELEGEMRRNYPELF
DP+H++DFEPLQ++ ++S+E +P+E+LA E K LR+R I LVK+ W+N VEEATWE E +MR YPELF
Subjt: DPSHIIDFEPLQLNSDMSFEGKPLEILAFEKKVLRNRAIDLVKVQWRNQVVEEATWELEGEMRRNYPELF
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| TYJ98213.1 pol protein [Cucumis melo var. makuwa] | 1.3e-217 | 56.87 | Show/hide |
Query: MDMMDRVFKVFLDRFVIVFIDDILVYSKSKEDHASHLRQILSALRENQLYAKFSKCDFWQEVVAFLGHVVSKERVVMDPSKIEAVSSWARPTTVSEIRSF
MD+M+RVFK FLD FVIVFIDDIL+YSK++ +H HL Q+L LR N+LYAKFSKC+FW + V+FLGHVVS E V DP+KIEAV++W R +TV+EIRSF
Subjt: MDMMDRVFKVFLDRFVIVFIDDILVYSKSKEDHASHLRQILSALRENQLYAKFSKCDFWQEVVAFLGHVVSKERVVMDPSKIEAVSSWARPTTVSEIRSF
Query: LGLAGYYYPFVRNFSAIASPLTRLMRKGVDFVWDEKCDESFAKLKSSLTSAPVLVVSRGTGGFVVYSDASKFGLGCVLMQHGKVIAYASRQLKPHEQNYP
LGLA YY FV +FS IASPLT+L RKG FVW C+ SF +LK L +APVL V G+ FV+YSDASK GLGCV+MQ GKV+AYASRQLK HEQNYP
Subjt: LGLAGYYYPFVRNFSAIASPLTRLMRKGVDFVWDEKCDESFAKLKSSLTSAPVLVVSRGTGGFVVYSDASKFGLGCVLMQHGKVIAYASRQLKPHEQNYP
Query: THDMELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDVNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKTSHFATLSNPR-----------
THD+ELAAVVFALKIWRHYLYGEKI IF+DH+SLKYFFTQK+ NMRQRRWLELVKDYDCEILYHPGKANVVADALS K +H A L +
Subjt: THDMELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDVNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKTSHFATLSNPR-----------
Query: ------------------------NGDLRYKGRLCVPAEAGIRTELLTEAHTSPFAWHPGVTWGAAVEVGGDYHGIY-----LGSAQDTQRLCTNLGDRR
+ L ++GRLCVP ++ ++TELL EAH+SPF HPG T ++ D +Y D C +
Subjt: ------------------------NGDLRYKGRLCVPAEAGIRTELLTEAHTSPFAWHPGVTWGAAVEVGGDYHGIY-----LGSAQDTQRLCTNLGDRR
Query: QVDQEP-------------------------DW---------------AQSAAIVP------------------PST----------LRPMVR------Q
Q P W +SA VP P T L M+R
Subjt: QVDQEP-------------------------DW---------------AQSAAIVP------------------PST----------LRPMVR------Q
Query: SGWDQYLYLMEFAYNNSYQVTIQMAPFEALYGKRCRSPVFWEEVGDRKVLGPELLQLTNEAVQKIRARMLTAQNRQKSYADVRRRELEFEVGQHVFLKVA
WD L+LMEFAYNNSYQ TI MAPFEALYGK CRSPV W EVG++++LGPEL+Q TN A+QKIRARMLTAQNRQKSYA+VRR++LEFEVG VFLKVA
Subjt: SGWDQYLYLMEFAYNNSYQVTIQMAPFEALYGKRCRSPVFWEEVGDRKVLGPELLQLTNEAVQKIRARMLTAQNRQKSYADVRRRELEFEVGQHVFLKVA
Query: SMRGVLRFGKKGKLSPRFVGPFEILERVGAVAYRLALPPSLAVVHSVFHVSMLCRYVADPSHIIDFEPLQLNSDMSFEGKPLEILAFEKKVLRNRAIDLV
M+GVLRF KKGKLSPRFVGPFEILER+G VAYRLALPPSL+ VH+VFHVSML RYVAD +H++DFEPLQ++ ++S+E +P+EILA E K LR+R I LV
Subjt: SMRGVLRFGKKGKLSPRFVGPFEILERVGAVAYRLALPPSLAVVHSVFHVSMLCRYVADPSHIIDFEPLQLNSDMSFEGKPLEILAFEKKVLRNRAIDLV
Query: KVQWRNQVVEEATWELEGEMRRNYPELF
KV WRN VEEATWE E +MR YPELF
Subjt: KVQWRNQVVEEATWELEGEMRRNYPELF
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T7M0 Reverse transcriptase | 2.6e-224 | 56.57 | Show/hide |
Query: MDMMDRVFKVFLDRFVIVFIDDILVYSKSKEDHASHLRQILSALRENQLYAKFSKCDFWQEVVAFLGHVVSKERVVMDPSKIEAVSSWARPTTVSEIRSF
MD+M+R+FK FLD FVIVFIDDIL+YSK++ +H HL Q+L LR N+LYAKFSKC+FW V FLGHVVS E V +DP+KIEAV++W RP+TVSEIRSF
Subjt: MDMMDRVFKVFLDRFVIVFIDDILVYSKSKEDHASHLRQILSALRENQLYAKFSKCDFWQEVVAFLGHVVSKERVVMDPSKIEAVSSWARPTTVSEIRSF
Query: LGLAGYYYPFVRNFSAIASPLTRLMRKGVDFVWDEKCDESFAKLKSSLTSAPVLVVSRGTGGFVVYSDASKFGLGCVLMQHGKVIAYASRQLKPHEQNYP
LGLAGYY FV +FS IA+PLT+L RKG+ FVW C+ SF +LK L +APVL V G+G FV+YSDASK GLGCVLMQ GKV+AYASRQLK HEQNYP
Subjt: LGLAGYYYPFVRNFSAIASPLTRLMRKGVDFVWDEKCDESFAKLKSSLTSAPVLVVSRGTGGFVVYSDASKFGLGCVLMQHGKVIAYASRQLKPHEQNYP
Query: THDMELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDVNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKTSHFATL---------------
THD+ELAAVVFALKIWRHYLYGEKIQI++DH+SLKYFFTQK++NMRQRRWLELVKDYDCEILYHPGKANVVADALSRK +H A L
Subjt: THDMELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDVNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKTSHFATL---------------
Query: --------------------------------------------------SNPRNGDLRYKGRLCVPAEAGIRTELLTEAHTSPFAWHPGVT--------
S + L ++GRLCVP ++ I+TELLTEAH+SPF HPG T
Subjt: --------------------------------------------------SNPRNGDLRYKGRLCVPAEAGIRTELLTEAHTSPFAWHPGVT--------
Query: -------------WGAAVEVGGDYHGIYLGSAQDTQRLCTNLGDRRQVDQ-EPDWAQSAAIVP-----------------------------PST-----
+ + VEVG G Y G+AQD + L +LG RQ + P A+ + P T
Subjt: -------------WGAAVEVGGDYHGIYLGSAQDTQRLCTNLGDRRQVDQ-EPDWAQSAAIVP-----------------------------PST-----
Query: -----LRPMVR------QSGWDQYLYLMEFAYNNSYQVTIQMAPFEALYGKRCRSPVFWEEVGDRKVLGPELLQLTNEAVQKIRARMLTAQNRQKSYADV
L M+R WD +L+LMEFAYNNSYQ TI MAPFEALYGK CRSPV W EVG++++LGPEL+Q TN A+QKI ARMLTAQ+RQKSYADV
Subjt: -----LRPMVR------QSGWDQYLYLMEFAYNNSYQVTIQMAPFEALYGKRCRSPVFWEEVGDRKVLGPELLQLTNEAVQKIRARMLTAQNRQKSYADV
Query: RRRELEFEVGQHVFLKVASMRGVLRFGKKGKLSPRFVGPFEILERVGAVAYRLALPPSLAVVHSVFHVSMLCRYVADPSHIIDFEPLQLNSDMSFEGKPL
RR++LEFEVG VFLKVA M+GVLRF KKGKLSPRFVGPFEILER+G VAYRLALPPS A VH VFH+SML +YVADP+H++DF PLQ++ ++S+E +P+
Subjt: RRRELEFEVGQHVFLKVASMRGVLRFGKKGKLSPRFVGPFEILERVGAVAYRLALPPSLAVVHSVFHVSMLCRYVADPSHIIDFEPLQLNSDMSFEGKPL
Query: EILAFEKKVLRNRAIDLVKVQWRNQVVEEATWELEGEMRRNYPELF
EI+A E K LR+R I LVKV W+N VEEATWE E MR YPELF
Subjt: EILAFEKKVLRNRAIDLVKVQWRNQVVEEATWELEGEMRRNYPELF
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| A0A5A7U747 Pol protein | 6.3e-218 | 56.87 | Show/hide |
Query: MDMMDRVFKVFLDRFVIVFIDDILVYSKSKEDHASHLRQILSALRENQLYAKFSKCDFWQEVVAFLGHVVSKERVVMDPSKIEAVSSWARPTTVSEIRSF
MD+M+RVFK FLD FVIVFIDDIL+YSK++ +H HL Q+L LR N+LYAKFSKC+FW + V+FLGHVVS E V DP+KIEAV++W R +TV+EIRSF
Subjt: MDMMDRVFKVFLDRFVIVFIDDILVYSKSKEDHASHLRQILSALRENQLYAKFSKCDFWQEVVAFLGHVVSKERVVMDPSKIEAVSSWARPTTVSEIRSF
Query: LGLAGYYYPFVRNFSAIASPLTRLMRKGVDFVWDEKCDESFAKLKSSLTSAPVLVVSRGTGGFVVYSDASKFGLGCVLMQHGKVIAYASRQLKPHEQNYP
LGLA YY FV +FS IASPLT+L RKG FVW C+ SF +LK L +APVL V G+ FV+YSDASK GLGCV+MQ GKV+AYASRQLK HEQNYP
Subjt: LGLAGYYYPFVRNFSAIASPLTRLMRKGVDFVWDEKCDESFAKLKSSLTSAPVLVVSRGTGGFVVYSDASKFGLGCVLMQHGKVIAYASRQLKPHEQNYP
Query: THDMELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDVNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKTSHFATLSNPR-----------
THD+ELAAVVFALKIWRHYLYGEKI IF+DH+SLKYFFTQK+ NMRQRRWLELVKDYDCEILYHPGKANVVADALS K +H A L +
Subjt: THDMELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDVNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKTSHFATLSNPR-----------
Query: ------------------------NGDLRYKGRLCVPAEAGIRTELLTEAHTSPFAWHPGVTWGAAVEVGGDYHGIY-----LGSAQDTQRLCTNLGDRR
+ L ++GRLCVP ++ ++TELL EAH+SPF HPG T ++ D +Y D C +
Subjt: ------------------------NGDLRYKGRLCVPAEAGIRTELLTEAHTSPFAWHPGVTWGAAVEVGGDYHGIY-----LGSAQDTQRLCTNLGDRR
Query: QVDQEP-------------------------DW---------------AQSAAIVP------------------PST----------LRPMVR------Q
Q P W +SA VP P T L M+R
Subjt: QVDQEP-------------------------DW---------------AQSAAIVP------------------PST----------LRPMVR------Q
Query: SGWDQYLYLMEFAYNNSYQVTIQMAPFEALYGKRCRSPVFWEEVGDRKVLGPELLQLTNEAVQKIRARMLTAQNRQKSYADVRRRELEFEVGQHVFLKVA
WD L+LMEFAYNNSYQ TI MAPFEALYGK CRSPV W EVG++++LGPEL+Q TN A+QKIRARMLTAQNRQKSYA+VRR++LEFEVG VFLKVA
Subjt: SGWDQYLYLMEFAYNNSYQVTIQMAPFEALYGKRCRSPVFWEEVGDRKVLGPELLQLTNEAVQKIRARMLTAQNRQKSYADVRRRELEFEVGQHVFLKVA
Query: SMRGVLRFGKKGKLSPRFVGPFEILERVGAVAYRLALPPSLAVVHSVFHVSMLCRYVADPSHIIDFEPLQLNSDMSFEGKPLEILAFEKKVLRNRAIDLV
M+GVLRF KKGKLSPRFVGPFEILER+G VAYRLALPPSL+ VH+VFHVSML RYVAD +H++DFEPLQ++ ++S+E +P+EILA E K LR+R I LV
Subjt: SMRGVLRFGKKGKLSPRFVGPFEILERVGAVAYRLALPPSLAVVHSVFHVSMLCRYVADPSHIIDFEPLQLNSDMSFEGKPLEILAFEKKVLRNRAIDLV
Query: KVQWRNQVVEEATWELEGEMRRNYPELF
KV WRN VEEATWE E +MR YPELF
Subjt: KVQWRNQVVEEATWELEGEMRRNYPELF
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| A0A5A7V6R2 Reverse transcriptase | 3.3e-219 | 54.16 | Show/hide |
Query: MDMMDRVFKVFLDRFVIVFIDDILVYSKSKEDHASHLRQILSALRENQLYAKFSKCDFWQEVVAFLGHVVSKERVVMDPSKIEAVSSWARPTTVSEIRSF
MD+M+RVFK FLD FVIVFIDDIL+YSK++ +H HL Q+L LR N+LYAKFSKC+FW V FLGHVVS E V +DP+KIEAV++W RP+TVSEIRSF
Subjt: MDMMDRVFKVFLDRFVIVFIDDILVYSKSKEDHASHLRQILSALRENQLYAKFSKCDFWQEVVAFLGHVVSKERVVMDPSKIEAVSSWARPTTVSEIRSF
Query: LGLAGYYYPFVRNFSAIASPLTRLMRKGVDFVWDEKCDESFAKLKSSLTSAPVLVVSRGTGGFVVYSDASKFGLGCVLMQHGKVIAYASRQLKPHEQNYP
LGLAGYY FV +FS IASPLT+L RKG FVW C+ SF +LK L +APVL V G+G FV+YSDASK GLGCVLMQ GKV+AYASRQLK HEQNYP
Subjt: LGLAGYYYPFVRNFSAIASPLTRLMRKGVDFVWDEKCDESFAKLKSSLTSAPVLVVSRGTGGFVVYSDASKFGLGCVLMQHGKVIAYASRQLKPHEQNYP
Query: THDMELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDVNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKTSHFATL---------------
THD+ELAAVVFALKIWRHYLYGEKIQI++DH+SLKYFFTQK++NMRQRRWLELVKDYDCEILYHPGKANVVADALSRK +H A L
Subjt: THDMELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDVNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKTSHFATL---------------
Query: --------------------------------------------------SNPRNGDLRYKGRLCVPAEAGIRTELLTEAHTSPFAWHPGVT--------
S + L ++GRLCVP + ++TELLTEAH+SPF HPG T
Subjt: --------------------------------------------------SNPRNGDLRYKGRLCVPAEAGIRTELLTEAHTSPFAWHPGVT--------
Query: --WGAAVE--------------------------------VGGDYHGIYL----GSAQDTQRLCTNLGDRRQVDQEPDWAQ-------------------
W ++ G + + + G QD + L +LG RQ + +
Subjt: --WGAAVE--------------------------------VGGDYHGIYL----GSAQDTQRLCTNLGDRRQVDQEPDWAQ-------------------
Query: -----------SAAIVPPS---------TLRPMVR------QSGWDQYLYLMEFAYNNSYQVTIQMAPFEALYGKRCRSPVFWEEVGDRKVLGPELLQLT
S A P + L M+R WD +L+LMEFAYNNSYQ TI MAPFEALYGK CRSPV W EVG++++LGPEL+Q T
Subjt: -----------SAAIVPPS---------TLRPMVR------QSGWDQYLYLMEFAYNNSYQVTIQMAPFEALYGKRCRSPVFWEEVGDRKVLGPELLQLT
Query: NEAVQKIRARMLTAQNRQKSYADVRRRELEFEVGQHVFLKVASMRGVLRFGKKGKLSPRFVGPFEILERVGAVAYRLALPPSLAVVHSVFHVSMLCRYVA
N A+QKIRARMLTAQ+RQKSYADVRR++LEFEVG VFLKVA M+GV+RF KKGKLSPRFVGPFEILER+G VAYRLALPPS A VH VFH+SML +YVA
Subjt: NEAVQKIRARMLTAQNRQKSYADVRRRELEFEVGQHVFLKVASMRGVLRFGKKGKLSPRFVGPFEILERVGAVAYRLALPPSLAVVHSVFHVSMLCRYVA
Query: DPSHIIDFEPLQLNSDMSFEGKPLEILAFEKKVLRNRAIDLVKVQWRNQVVEEATWELEGEMRRNYPELF
DP+H++DFEPLQ++ ++S+E +P+E+LA E K LR+R I LVK+ W+N VEEATWE E +MR YPELF
Subjt: DPSHIIDFEPLQLNSDMSFEGKPLEILAFEKKVLRNRAIDLVKVQWRNQVVEEATWELEGEMRRNYPELF
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| A0A5A7V810 Reverse transcriptase | 8.2e-218 | 54.22 | Show/hide |
Query: MDMMDRVFKVFLDRFVIVFIDDILVYSKSKEDHASHLRQILSALRENQLYAKFSKCDFWQEVVAFLGHVVSKERVVMDPSKIEAVSSWARPTTVSEIRSF
MD+M+RVF+ FLD FVIVFIDDIL+YSK++ +H HLR +L LR+N+LYAKFSKC+FW + V+FLGHVVSK V +DP+KIEAV+ W RP+TVSE+RSF
Subjt: MDMMDRVFKVFLDRFVIVFIDDILVYSKSKEDHASHLRQILSALRENQLYAKFSKCDFWQEVVAFLGHVVSKERVVMDPSKIEAVSSWARPTTVSEIRSF
Query: LGLAGYYYPFVRNFSAIASPLTRLMRKGVDFVWDEKCDESFAKLKSSLTSAPVLVVSRGTGGFVVYSDASKFGLGCVLMQHGKVIAYASRQLKPHEQNYP
LGLAGYY FV NFS IA+PLT+L RK FVW + C++SF LK L +APVL V G+G FV+YSDASK GL CVLMQ GKV+AYASRQLK HEQNYP
Subjt: LGLAGYYYPFVRNFSAIASPLTRLMRKGVDFVWDEKCDESFAKLKSSLTSAPVLVVSRGTGGFVVYSDASKFGLGCVLMQHGKVIAYASRQLKPHEQNYP
Query: THDMELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDVNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKTSHFATL---------------
THD+ELAAVVFALKIWRHYLYGEKIQIF+DH+SLKYFFTQK++NMRQRRWLELVKDYDCEILYHPGKANVVADALSRK SH A L
Subjt: THDMELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDVNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKTSHFATL---------------
Query: --------------------------------------------------SNPRNGDLRYKGRLCVPAEAGIRTELLTEAHTSPFAWHPGVTWGAAVEVG
S +G L ++ RLCVP+++ ++TELL+EAH+SPF+ HPG T ++
Subjt: --------------------------------------------------SNPRNGDLRYKGRLCVPAEAGIRTELLTEAHTSPFAWHPGVTWGAAVEVG
Query: GDYHGIYLGSAQDTQRLCTNLGDRRQVDQE-----------------PDW------------------------------AQSAAIVPPST---------
D +Y ++ +R R V Q+ P+W +SA VP +
Subjt: GDYHGIYLGSAQDTQRLCTNLGDRRQVDQE-----------------PDW------------------------------AQSAAIVPPST---------
Query: --LRPMVRQSG---------------------WDQYLYLMEFAYNNSYQVTIQMAPFEALYGKRCRSPVFWEEVGDRKVLGPELLQLTNEAVQKIRARML
+ +VR G WD +L+LMEFAYNNSYQ TI MAPFEALYGK CRSPV W EVG+++++GPEL+Q TNEA+QKIR+RM
Subjt: --LRPMVRQSG---------------------WDQYLYLMEFAYNNSYQVTIQMAPFEALYGKRCRSPVFWEEVGDRKVLGPELLQLTNEAVQKIRARML
Query: TAQNRQKSYADVRRRELEFEVGQHVFLKVASMRGVLRFGKKGKLSPRFVGPFEILERVGAVAYRLALPPSLAVVHSVFHVSMLCRYVADPSHIIDFEPLQ
TAQ+RQKSYADVRR++LEFEVG VFLKVA MRGVLRF +KGKLSPRFVGPFEILER+G VAYRLALPPSL+ VH VFHVSML +YV DPSH++D++PL+
Subjt: TAQNRQKSYADVRRRELEFEVGQHVFLKVASMRGVLRFGKKGKLSPRFVGPFEILERVGAVAYRLALPPSLAVVHSVFHVSMLCRYVADPSHIIDFEPLQ
Query: LNSDMSFEGKPLEILAFEKKVLRNRAIDLVKVQWRNQVVEEATWELEGEMRRNYPELF
++ ++S+ +P E+LA E K LRN+ I LVKV WRN VEEATWE E +MR YPELF
Subjt: LNSDMSFEGKPLEILAFEKKVLRNRAIDLVKVQWRNQVVEEATWELEGEMRRNYPELF
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| A0A5D3BG43 Pol protein | 6.3e-218 | 56.87 | Show/hide |
Query: MDMMDRVFKVFLDRFVIVFIDDILVYSKSKEDHASHLRQILSALRENQLYAKFSKCDFWQEVVAFLGHVVSKERVVMDPSKIEAVSSWARPTTVSEIRSF
MD+M+RVFK FLD FVIVFIDDIL+YSK++ +H HL Q+L LR N+LYAKFSKC+FW + V+FLGHVVS E V DP+KIEAV++W R +TV+EIRSF
Subjt: MDMMDRVFKVFLDRFVIVFIDDILVYSKSKEDHASHLRQILSALRENQLYAKFSKCDFWQEVVAFLGHVVSKERVVMDPSKIEAVSSWARPTTVSEIRSF
Query: LGLAGYYYPFVRNFSAIASPLTRLMRKGVDFVWDEKCDESFAKLKSSLTSAPVLVVSRGTGGFVVYSDASKFGLGCVLMQHGKVIAYASRQLKPHEQNYP
LGLA YY FV +FS IASPLT+L RKG FVW C+ SF +LK L +APVL V G+ FV+YSDASK GLGCV+MQ GKV+AYASRQLK HEQNYP
Subjt: LGLAGYYYPFVRNFSAIASPLTRLMRKGVDFVWDEKCDESFAKLKSSLTSAPVLVVSRGTGGFVVYSDASKFGLGCVLMQHGKVIAYASRQLKPHEQNYP
Query: THDMELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDVNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKTSHFATLSNPR-----------
THD+ELAAVVFALKIWRHYLYGEKI IF+DH+SLKYFFTQK+ NMRQRRWLELVKDYDCEILYHPGKANVVADALS K +H A L +
Subjt: THDMELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDVNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKTSHFATLSNPR-----------
Query: ------------------------NGDLRYKGRLCVPAEAGIRTELLTEAHTSPFAWHPGVTWGAAVEVGGDYHGIY-----LGSAQDTQRLCTNLGDRR
+ L ++GRLCVP ++ ++TELL EAH+SPF HPG T ++ D +Y D C +
Subjt: ------------------------NGDLRYKGRLCVPAEAGIRTELLTEAHTSPFAWHPGVTWGAAVEVGGDYHGIY-----LGSAQDTQRLCTNLGDRR
Query: QVDQEP-------------------------DW---------------AQSAAIVP------------------PST----------LRPMVR------Q
Q P W +SA VP P T L M+R
Subjt: QVDQEP-------------------------DW---------------AQSAAIVP------------------PST----------LRPMVR------Q
Query: SGWDQYLYLMEFAYNNSYQVTIQMAPFEALYGKRCRSPVFWEEVGDRKVLGPELLQLTNEAVQKIRARMLTAQNRQKSYADVRRRELEFEVGQHVFLKVA
WD L+LMEFAYNNSYQ TI MAPFEALYGK CRSPV W EVG++++LGPEL+Q TN A+QKIRARMLTAQNRQKSYA+VRR++LEFEVG VFLKVA
Subjt: SGWDQYLYLMEFAYNNSYQVTIQMAPFEALYGKRCRSPVFWEEVGDRKVLGPELLQLTNEAVQKIRARMLTAQNRQKSYADVRRRELEFEVGQHVFLKVA
Query: SMRGVLRFGKKGKLSPRFVGPFEILERVGAVAYRLALPPSLAVVHSVFHVSMLCRYVADPSHIIDFEPLQLNSDMSFEGKPLEILAFEKKVLRNRAIDLV
M+GVLRF KKGKLSPRFVGPFEILER+G VAYRLALPPSL+ VH+VFHVSML RYVAD +H++DFEPLQ++ ++S+E +P+EILA E K LR+R I LV
Subjt: SMRGVLRFGKKGKLSPRFVGPFEILERVGAVAYRLALPPSLAVVHSVFHVSMLCRYVADPSHIIDFEPLQLNSDMSFEGKPLEILAFEKKVLRNRAIDLV
Query: KVQWRNQVVEEATWELEGEMRRNYPELF
KV WRN VEEATWE E +MR YPELF
Subjt: KVQWRNQVVEEATWELEGEMRRNYPELF
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| SwissProt top hits | e value | %identity | Alignment |
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| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 9.5e-54 | 39.27 | Show/hide |
Query: MDRVFKVFLDRFVIVFIDDILVYSKSKEDHASHLRQILSALRENQLYAKFSKCDFWQEVVAFLGHVVSKERVVMDPSKIEAVSSWARPTTVSEIRSFLGL
M+ + + L++ +V++DDI+V+S S ++H L + L + L + KC+F ++ FLGHV++ + + +P KIEA+ + PT EI++FLGL
Subjt: MDRVFKVFLDRFVIVFIDDILVYSKSKEDHASHLRQILSALRENQLYAKFSKCDFWQEVVAFLGHVVSKERVVMDPSKIEAVSSWARPTTVSEIRSFLGL
Query: AGYYYPFVRNFSAIASPLTRLMRKGVDF-VWDEKCDESFAKLKSSLTSAPVLVVSRGTGGFVVYSDASKFGLGCVLMQHGKVIAYASRQLKPHEQNYPTH
GYY F+ NF+ IA P+T+ ++K + + + D +F KLK ++ P+L V T F + +DAS LG VL Q G ++Y SR L HE NY T
Subjt: AGYYYPFVRNFSAIASPLTRLMRKGVDF-VWDEKCDESFAKLKSSLTSAPVLVVSRGTGGFVVYSDASKFGLGCVLMQHGKVIAYASRQLKPHEQNYPTH
Query: DMELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDVNMRQRRWLELVKDYDCEILYHPGKANVVADALSR
+ EL A+V+A K +RHYL G +I SDHQ L + + KD N + RW + ++D +I Y GK N VADALSR
Subjt: DMELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDVNMRQRRWLELVKDYDCEILYHPGKANVVADALSR
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| P10401 Retrovirus-related Pol polyprotein from transposon gypsy | 2.3e-47 | 35.07 | Show/hide |
Query: MDRVFKVFLDRFVIVFIDDILVYSKSKEDHASHLRQILSALRENQLYAKFSKCDFWQEVVAFLGHVVSKERVVMDPSKIEAVSSWARPTTVSEIRSFLGL
+D V + + + V++DD++++S+++ DH H+ +L L + + K F++E V +LG +VSK+ DP K++A+ + P V ++RSFLGL
Subjt: MDRVFKVFLDRFVIVFIDDILVYSKSKEDHASHLRQILSALRENQLYAKFSKCDFWQEVVAFLGHVVSKERVVMDPSKIEAVSSWARPTTVSEIRSFLGL
Query: AGYYYPFVRNFSAIASPLTRL-----------MRKGVDFVWDEKCDESFAKLKSSLTSAPVLV-VSRGTGGFVVYSDASKFGLGCVLMQHGKVIAYASRQ
A YY F+++F+AIA P+T + M K + ++E +F +L++ L S V++ F + +DAS G+G VL Q G+ I SR
Subjt: AGYYYPFVRNFSAIASPLTRL-----------MRKGVDFVWDEKCDESFAKLKSSLTSAPVLV-VSRGTGGFVVYSDASKFGLGCVLMQHGKVIAYASRQ
Query: LKPHEQNYPTHDMELAAVVFALKIWRHYLYGEK-IQIFSDHQSLKYFFTQKDVNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
LK EQNY T++ EL A+V+AL +++LYG + I IF+DHQ L + ++ N + +RW + ++ ++ Y PGK N VADALSR+
Subjt: LKPHEQNYPTHDMELAAVVFALKIWRHYLYGEK-IQIFSDHQSLKYFFTQKDVNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 9.2e-49 | 36.96 | Show/hide |
Query: MDRVFKVFLDRFVIVFIDDILVYSKSKEDHASHLRQILSALRENQLYAKFSKCDFWQEVVAFLGHVVSKERVVMDPSKIEAVSSWARPTTVSEIRSFLGL
M+ + + L++ +V++DDI+++S S +H + ++ + + L + L + KC+F ++ FLGH+V+ + + +P K++A+ S+ PT EIR+FLGL
Subjt: MDRVFKVFLDRFVIVFIDDILVYSKSKEDHASHLRQILSALRENQLYAKFSKCDFWQEVVAFLGHVVSKERVVMDPSKIEAVSSWARPTTVSEIRSFLGL
Query: AGYYYPFVRNFSAIASPLTRLMRKGVDFVWDEKCD--ESFAKLKSSLTSAPVLVVSRGTGGFVVYSDASKFGLGCVLMQHGKVIAYASRQLKPHEQNYPT
GYY F+ N++ IA P+T ++K + +K + E+F KLK+ + P+L + FV+ +DAS LG VL Q+G I++ SR L HE NY
Subjt: AGYYYPFVRNFSAIASPLTRLMRKGVDFVWDEKCD--ESFAKLKSSLTSAPVLVVSRGTGGFVVYSDASKFGLGCVLMQHGKVIAYASRQLKPHEQNYPT
Query: HDMELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDVNMRQRRWLELVKDYDCEILYHPGKANVVADALSR
+ EL A+V+A K +RHYL G + I SDHQ L++ K+ + RW + +Y +I Y GK N VADALSR
Subjt: HDMELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDVNMRQRRWLELVKDYDCEILYHPGKANVVADALSR
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 2.4e-41 | 35.19 | Show/hide |
Query: RFVIVFIDDILVYSKSKEDHASHLRQILSALRENQLYAKFSKCDFWQEVVAFLGHVVSKERVVMDPSKIEAVSSWARPTTVSEIRSFLGLAGYYYPFVRN
RFV V++DDIL++S+S E+H HL +L L+ L K KC F E FLG+ + +++ K A+ + P TV + + FLG+ YY F+ N
Subjt: RFVIVFIDDILVYSKSKEDHASHLRQILSALRENQLYAKFSKCDFWQEVVAFLGHVVSKERVVMDPSKIEAVSSWARPTTVSEIRSFLGLAGYYYPFVRN
Query: FSAIASPLTRLMRKGVDFVWDEKCDESFAKLKSSLTSAPVLVVSRGTGGFVVYSDASKFGLGCVLMQHGK------VIAYASRQLKPHEQNYPTHDMELA
S IA P+ + W EK D++ KLK++L ++PVLV + + +DASK G+G VL + V+ Y S+ L+ ++NYP ++EL
Subjt: FSAIASPLTRLMRKGVDFVWDEKCDESFAKLKSSLTSAPVLVVSRGTGGFVVYSDASKFGLGCVLMQHGK------VIAYASRQLKPHEQNYPTHDMELA
Query: AVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDVNMRQRRWLELVKDYDCEILYHPGKANVVADALSR
++ AL +R+ L+G+ + +DH SL + + R +RWL+ + YD + Y G NVVADA+SR
Subjt: AVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDVNMRQRRWLELVKDYDCEILYHPGKANVVADALSR
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 5.4e-49 | 36.08 | Show/hide |
Query: MMDRVFKVFLDRFVIVFIDDILVYSKSKEDHASHLRQILSALRENQLYAKFSKCDFWQEVVAFLGHVVSKERVVMDPSKIEAVSSWARPTTVSEIRSFLG
M+D + + + + V+IDDI+V+S+ + H +LR +L++L + L K F V FLG++V+ + + DP K+ A+S PT+V E++ FLG
Subjt: MMDRVFKVFLDRFVIVFIDDILVYSKSKEDHASHLRQILSALRENQLYAKFSKCDFWQEVVAFLGHVVSKERVVMDPSKIEAVSSWARPTTVSEIRSFLG
Query: LAGYYYPFVRNFSAIASPLTRLMR-----------KGVDFVWDEKCDESFAKLKSSLTSAPVLVVSRGTGGFVVYSDASKFGLGCVLMQ----HGKVIAY
+ YY F+++++ +A PLT L R V DE +SF LKS L S+ +L T F + +DAS + +G VL Q + IAY
Subjt: LAGYYYPFVRNFSAIASPLTRLMR-----------KGVDFVWDEKCDESFAKLKSSLTSAPVLVVSRGTGGFVVYSDASKFGLGCVLMQ----HGKVIAY
Query: ASRQLKPHEQNYPTHDMELAAVVFALKIWRHYLYGE-KIQIFSDHQSLKYFFTQKDVNMRQRRWLELVKDYDCEILYHPGKANVVADALSR
SR L E+NY T + E+ A++++L R YLYG I++++DHQ L + ++ N + +RW +++Y+CE++Y PGK+NVVADALSR
Subjt: ASRQLKPHEQNYPTHDMELAAVVFALKIWRHYLYGE-KIQIFSDHQSLKYFFTQKDVNMRQRRWLELVKDYDCEILYHPGKANVVADALSR
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