; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0016671 (gene) of Chayote v1 genome

Gene IDSed0016671
OrganismSechium edule (Chayote v1)
Descriptionribosome production factor 1
Genome locationLG02:38621025..38625955
RNA-Seq ExpressionSed0016671
SyntenySed0016671
Gene Ontology termsGO:0000460 - maturation of 5.8S rRNA (biological process)
GO:0000470 - maturation of LSU-rRNA (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0030687 - preribosome, large subunit precursor (cellular component)
GO:0042134 - rRNA primary transcript binding (molecular function)
InterPro domainsIPR007109 - Brix domain
IPR044281 - U3 snoRNP protein/Ribosome production factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443155.1 PREDICTED: ribosome production factor 1 isoform X1 [Cucumis melo]2.5e-17594.58Show/hide
Query:  MGEEKKSRGIIPSMIKNKEKRAEVHANLKNQKRLEKRKRVKARDAAEKQALELGEEPAPRKTPRTIENTREVDETVCKPDDEELFAGNDADEFSAVIKRD
        MGEEKK++GIIPSMIKNKEKRAEVHANLK+QK+LEKRKR KARDAAEKQALELGEE  PRK PRTIENTREVDETVCKPDDEELFAGNDADEFS++IKRD
Subjt:  MGEEKKSRGIIPSMIKNKEKRAEVHANLKNQKRLEKRKRVKARDAAEKQALELGEEPAPRKTPRTIENTREVDETVCKPDDEELFAGNDADEFSAVIKRD

Query:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKEFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAK+FTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKEFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPKFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKEADSKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL
         H+PELVLTNFTTRLGLRVGRLIQSLFPQDP FRGRRVVTFHNQRDF+FFRHHRYIFESKENKKEADSK KSKDTKGEKV QQKV+ARLQECGPRFTMKL
Subjt:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPKFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKEADSKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

XP_022943997.1 ribosome production factor 1 [Cucurbita moschata]6.5e-17191.87Show/hide
Query:  MGEEKKSRGIIPSMIKNKEKRAEVHANLKNQKRLEKRKRVKARDAAEKQALELGEEPAPRKTPRTIENTREVDETVCKPDDEELFAGNDADEFSAVIKRD
        MGEEKK+R ++PSMIKNKEKRAEVHANLKNQK+LEKRKR KARDAAEKQALELGEEP PRKTPRTIENTREVDETVCKPDDEELFAGNDADEFS++IKRD
Subjt:  MGEEKKSRGIIPSMIKNKEKRAEVHANLKNQKRLEKRKRVKARDAAEKQALELGEEPAPRKTPRTIENTREVDETVCKPDDEELFAGNDADEFSAVIKRD

Query:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKEFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        I+PKVLITTCRFNS+IGP FISELLSVIPNAHYYKRGTNDLKKIIEYANA++FTSL+VVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKEFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPKFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKEADSKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL
         HEPELVLTNFTTRLGLR+GRLIQ+LFPQDP FRGRRVVTFHNQRDF+FFRHHRYIFE KENKKE DSK+KSKD KGEK SQ KVVARLQECGPRFTMKL
Subjt:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPKFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKEADSKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFD+KGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

XP_022971273.1 ribosome production factor 1 [Cucurbita maxima]4.9e-17192.17Show/hide
Query:  MGEEKKSRGIIPSMIKNKEKRAEVHANLKNQKRLEKRKRVKARDAAEKQALELGEEPAPRKTPRTIENTREVDETVCKPDDEELFAGNDADEFSAVIKRD
        MGEEKK+R +IPSMIKNKEKRAEVHANLKNQK+LEKRKR KARDAAEKQALELGEEP PRKTPRTIENTREVDETVCKPDDEELFAGNDADEFS++IKRD
Subjt:  MGEEKKSRGIIPSMIKNKEKRAEVHANLKNQKRLEKRKRVKARDAAEKQALELGEEPAPRKTPRTIENTREVDETVCKPDDEELFAGNDADEFSAVIKRD

Query:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKEFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        I+PKVLITTCRFNS+IGP FISELLSVIPNAHYYKRGTNDLKKIIEYANA++FTSL+VVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKEFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPKFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKEADSKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL
         HEPELVLTNFTTRLGLR+GRLIQ+LFPQDP FRGRRVVTFHNQRDF+FFRHHRYIFE KENKKE DSK+KSKD KGEK SQ KVVARLQECGPRFTMKL
Subjt:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPKFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKEADSKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFD+KGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

XP_031737500.1 ribosome production factor 1 [Cucumis sativus]5.8e-17292.47Show/hide
Query:  MGEEKKSRGIIPSMIKNKEKRAEVHANLKNQKRLEKRKRVKARDAAEKQALELGEEPAPRKTPRTIENTREVDETVCKPDDEELFAGNDADEFSAVIKRD
        MGEEKK++ I+PS IKNKEKRAEVHANLK+QK+LEKRKR KARDAAEKQALELGEE  PRK PRTIENTREVDETVCKPDDEELFAGNDADEFS++IKRD
Subjt:  MGEEKKSRGIIPSMIKNKEKRAEVHANLKNQKRLEKRKRVKARDAAEKQALELGEEPAPRKTPRTIENTREVDETVCKPDDEELFAGNDADEFSAVIKRD

Query:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKEFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPK+LITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKI+EYANAK+FTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRK+IKNHGNPT
Subjt:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKEFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPKFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKEADSKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL
         H+PELVLTNFTTRLGLRVGRLIQSLFPQDP FRGRRVVTFHNQRDF+FFRHHRYIFESKENKKEADSK KSK TKGEKV QQKV+ARLQECGPRFTMKL
Subjt:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPKFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKEADSKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

XP_038906205.1 ribosome production factor 1 [Benincasa hispida]2.1e-17493.67Show/hide
Query:  MGEEKKSRGIIPSMIKNKEKRAEVHANLKNQKRLEKRKRVKARDAAEKQALELGEEPAPRKTPRTIENTREVDETVCKPDDEELFAGNDADEFSAVIKRD
        MGEE K+RGIIPSMIKNKEKRAEVHANLKNQK+LEKRKR KARDAAEKQALELGEE  PRK PRTIENTREVDET+CKPDDEELFAGNDADEFS++IKR+
Subjt:  MGEEKKSRGIIPSMIKNKEKRAEVHANLKNQKRLEKRKRVKARDAAEKQALELGEEPAPRKTPRTIENTREVDETVCKPDDEELFAGNDADEFSAVIKRD

Query:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKEFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPKVLITTCRFNSTIGP FISELLSVIPNAHYYKRGTNDLKKIIEYANAK+FTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKEFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPKFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKEADSKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL
        SH+PELVLTNFTTRLGLR+GRLIQ+LFPQDP FRGRRVVTFHNQRDF+FFRHHRYIFESKENKKEADSK KSKDTKGEKV QQKV+ARLQECGPRFTMKL
Subjt:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPKFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKEADSKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

TrEMBL top hitse value%identityAlignment
A0A0A0LH42 Brix domain-containing protein2.8e-17292.47Show/hide
Query:  MGEEKKSRGIIPSMIKNKEKRAEVHANLKNQKRLEKRKRVKARDAAEKQALELGEEPAPRKTPRTIENTREVDETVCKPDDEELFAGNDADEFSAVIKRD
        MGEEKK++ I+PS IKNKEKRAEVHANLK+QK+LEKRKR KARDAAEKQALELGEE  PRK PRTIENTREVDETVCKPDDEELFAGNDADEFS++IKRD
Subjt:  MGEEKKSRGIIPSMIKNKEKRAEVHANLKNQKRLEKRKRVKARDAAEKQALELGEEPAPRKTPRTIENTREVDETVCKPDDEELFAGNDADEFSAVIKRD

Query:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKEFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPK+LITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKI+EYANAK+FTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRK+IKNHGNPT
Subjt:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKEFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPKFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKEADSKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL
         H+PELVLTNFTTRLGLRVGRLIQSLFPQDP FRGRRVVTFHNQRDF+FFRHHRYIFESKENKKEADSK KSK TKGEKV QQKV+ARLQECGPRFTMKL
Subjt:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPKFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKEADSKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

A0A1S3B854 ribosome production factor 1 isoform X11.2e-17594.58Show/hide
Query:  MGEEKKSRGIIPSMIKNKEKRAEVHANLKNQKRLEKRKRVKARDAAEKQALELGEEPAPRKTPRTIENTREVDETVCKPDDEELFAGNDADEFSAVIKRD
        MGEEKK++GIIPSMIKNKEKRAEVHANLK+QK+LEKRKR KARDAAEKQALELGEE  PRK PRTIENTREVDETVCKPDDEELFAGNDADEFS++IKRD
Subjt:  MGEEKKSRGIIPSMIKNKEKRAEVHANLKNQKRLEKRKRVKARDAAEKQALELGEEPAPRKTPRTIENTREVDETVCKPDDEELFAGNDADEFSAVIKRD

Query:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKEFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAK+FTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKEFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPKFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKEADSKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL
         H+PELVLTNFTTRLGLRVGRLIQSLFPQDP FRGRRVVTFHNQRDF+FFRHHRYIFESKENKKEADSK KSKDTKGEKV QQKV+ARLQECGPRFTMKL
Subjt:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPKFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKEADSKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

A0A5A7UHC7 Ribosome production factor 1 isoform X11.2e-17594.58Show/hide
Query:  MGEEKKSRGIIPSMIKNKEKRAEVHANLKNQKRLEKRKRVKARDAAEKQALELGEEPAPRKTPRTIENTREVDETVCKPDDEELFAGNDADEFSAVIKRD
        MGEEKK++GIIPSMIKNKEKRAEVHANLK+QK+LEKRKR KARDAAEKQALELGEE  PRK PRTIENTREVDETVCKPDDEELFAGNDADEFS++IKRD
Subjt:  MGEEKKSRGIIPSMIKNKEKRAEVHANLKNQKRLEKRKRVKARDAAEKQALELGEEPAPRKTPRTIENTREVDETVCKPDDEELFAGNDADEFSAVIKRD

Query:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKEFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAK+FTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKEFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPKFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKEADSKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL
         H+PELVLTNFTTRLGLRVGRLIQSLFPQDP FRGRRVVTFHNQRDF+FFRHHRYIFESKENKKEADSK KSKDTKGEKV QQKV+ARLQECGPRFTMKL
Subjt:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPKFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKEADSKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

A0A6J1FUK1 ribosome production factor 13.1e-17191.87Show/hide
Query:  MGEEKKSRGIIPSMIKNKEKRAEVHANLKNQKRLEKRKRVKARDAAEKQALELGEEPAPRKTPRTIENTREVDETVCKPDDEELFAGNDADEFSAVIKRD
        MGEEKK+R ++PSMIKNKEKRAEVHANLKNQK+LEKRKR KARDAAEKQALELGEEP PRKTPRTIENTREVDETVCKPDDEELFAGNDADEFS++IKRD
Subjt:  MGEEKKSRGIIPSMIKNKEKRAEVHANLKNQKRLEKRKRVKARDAAEKQALELGEEPAPRKTPRTIENTREVDETVCKPDDEELFAGNDADEFSAVIKRD

Query:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKEFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        I+PKVLITTCRFNS+IGP FISELLSVIPNAHYYKRGTNDLKKIIEYANA++FTSL+VVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKEFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPKFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKEADSKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL
         HEPELVLTNFTTRLGLR+GRLIQ+LFPQDP FRGRRVVTFHNQRDF+FFRHHRYIFE KENKKE DSK+KSKD KGEK SQ KVVARLQECGPRFTMKL
Subjt:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPKFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKEADSKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFD+KGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

A0A6J1I6C8 ribosome production factor 12.4e-17192.17Show/hide
Query:  MGEEKKSRGIIPSMIKNKEKRAEVHANLKNQKRLEKRKRVKARDAAEKQALELGEEPAPRKTPRTIENTREVDETVCKPDDEELFAGNDADEFSAVIKRD
        MGEEKK+R +IPSMIKNKEKRAEVHANLKNQK+LEKRKR KARDAAEKQALELGEEP PRKTPRTIENTREVDETVCKPDDEELFAGNDADEFS++IKRD
Subjt:  MGEEKKSRGIIPSMIKNKEKRAEVHANLKNQKRLEKRKRVKARDAAEKQALELGEEPAPRKTPRTIENTREVDETVCKPDDEELFAGNDADEFSAVIKRD

Query:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKEFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        I+PKVLITTCRFNS+IGP FISELLSVIPNAHYYKRGTNDLKKIIEYANA++FTSL+VVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKEFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPKFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKEADSKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL
         HEPELVLTNFTTRLGLR+GRLIQ+LFPQDP FRGRRVVTFHNQRDF+FFRHHRYIFE KENKKE DSK+KSKD KGEK SQ KVVARLQECGPRFTMKL
Subjt:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPKFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKEADSKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFD+KGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

SwissProt top hitse value%identityAlignment
Q5R631 Ribosome production factor 14.6e-7146.93Show/hide
Query:  GIIPSMIKNKEKRAEVHANLKNQKRLEKRKRVKARDAAEKQALELGEEPAPRKTPRTIENTREVDETVCKPDDEELFAGNDADEFSAVIKRDILPKVLIT
        G   S IKNKE+R  +    K Q+R EK   + A+   +K+   LG++  P+  P+TI+N R  DET   P+DEE+      DEF++   +   PK+LIT
Subjt:  GIIPSMIKNKEKRAEVHANLKNQKRLEKRKRVKARDAAEKQALELGEEPAPRKTPRTIENTREVDETVCKPDDEELFAGNDADEFSAVIKRDILPKVLIT

Query:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKEFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELV
        T             +L +VIPN+H Y R    LKKII    A++FT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++
Subjt:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKEFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELV

Query:  LTNFTTRLGLRVGRLIQSLFPQDPKFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKEADSKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQHGT
        L NFTTRLG  +GR+  SLFP +P+F GR+V TFHNQRD++FFR HRYIF S++                           +QE GPRFT+KL SLQ GT
Subjt:  LTNFTTRLGLRVGRLIQSLFPQDPKFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKEADSKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQHGT

Query:  FDSKGGEYEWVHKP-EMDTSRRRFFL
        FDSK GEYEWVHKP EMDTSRR+F L
Subjt:  FDSKGGEYEWVHKP-EMDTSRRRFFL

Q6IQU6 Ribosome production factor 11.8e-7048.76Show/hide
Query:  SMIKNKEKRAEVHANLKNQKRLEKRKRVKARDAAEKQALELGEEPAPRKTPRTIENTREVDETVCKPDDEELFAGNDADEFSAVIKRDILPKVLITTCRF
        S IKNK++R  +   LK +KR +KR  +K +   E++AL+  ++  P++ P+TIEN R  DET   P+DEE+      DEFSA   R   PKVLITT   
Subjt:  SMIKNKEKRAEVHANLKNQKRLEKRKRVKARDAAEKQALELGEEPAPRKTPRTIENTREVDETVCKPDDEELFAGNDADEFSAVIKRDILPKVLITTCRF

Query:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKEFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF
               F  +L +VIP+A+ Y R    LKK+I    ++ FT LMV++  R+  +G+++  LP+GPTAHFK+S+V LRK++K  G NPT H PE++L NF
Subjt:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKEFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF

Query:  TTRLGLRVGRLIQSLFPQDPKFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKEADSKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQHGTFDSK
        TTRLG  +GRL  +LFP DP+F GR+V TFHNQRDF+FFR HRYIF  K  KK                        +QE GPRFT+KL SLQ GTFDSK
Subjt:  TTRLGLRVGRLIQSLFPQDPKFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKEADSKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQHGTFDSK

Query:  GGEYEWVHK-PEMDTSRRRFFL
         GEYEWVHK  EMD+SRR+F L
Subjt:  GGEYEWVHK-PEMDTSRRRFFL

Q7TND5 Ribosome production factor 11.0e-7046.63Show/hide
Query:  GIIPSMIKNKEKRAEVHANLKNQKRLEKRKRVKARDAAEKQALELGEEPAPRKTPRTIENTREVDETVCKPDDEELFAGNDADEFSAVIKRDILPKVLIT
        G   S IKNK++R  +    K Q+R EK   + A+   +K+   LG++  P+  P+TI+N R  DET   P+DEE+      DEF++   R   PK+LIT
Subjt:  GIIPSMIKNKEKRAEVHANLKNQKRLEKRKRVKARDAAEKQALELGEEPAPRKTPRTIENTREVDETVCKPDDEELFAGNDADEFSAVIKRDILPKVLIT

Query:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKEFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELV
        T             +L +VIP++H Y R    LKKII    A++FT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++
Subjt:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKEFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELV

Query:  LTNFTTRLGLRVGRLIQSLFPQDPKFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKEADSKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQHGT
        L NFTTRLG  +GR+  SLFP +P+F GR+V TFHNQRD++FFR HRYIF+S++                           +QE GPRFT+KL SLQ GT
Subjt:  LTNFTTRLGLRVGRLIQSLFPQDPKFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKEADSKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQHGT

Query:  FDSKGGEYEWVHKP-EMDTSRRRFFL
        FDSK GEYEWVHKP EMDTSRR+F L
Subjt:  FDSKGGEYEWVHKP-EMDTSRRRFFL

Q8AVP1 Ribosome production factor 11.0e-7046.93Show/hide
Query:  SMIKNKEKRAEVHANLKNQKRLEK----RKRVKARDAAEKQALELGEEPAPRKTPRTIENTREVDETVCKPDDEELFAGNDADEFSAVIKRDILPKVLIT
        S IKNK++R  +   LK +KR EK    +KR K R+A       LG++  P+  P+TIEN R  DET   P DEE+      DEF+    +   PK+LIT
Subjt:  SMIKNKEKRAEVHANLKNQKRLEK----RKRVKARDAAEKQALELGEEPAPRKTPRTIENTREVDETVCKPDDEELFAGNDADEFSAVIKRDILPKVLIT

Query:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKEFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELV
        T          F  +L S+IPN+  Y R    LKKII    ++++T L+V++  R+  +GL++  LP+GPTAHFKISNV LRK++K  G  PT H+PE++
Subjt:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKEFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELV

Query:  LTNFTTRLGLRVGRLIQSLFPQDPKFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKEADSKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQHGT
        L NFTTRLG  +GR+  SL+P DP F GR+V TFHNQRD++FFR+HRY+F+S++                           +QE GPRFT+KL SLQ GT
Subjt:  LTNFTTRLGLRVGRLIQSLFPQDPKFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKEADSKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQHGT

Query:  FDSKGGEYEWVHK-PEMDTSRRRFFL
        FDSK GEYEWVHK  EMDTSRR+F L
Subjt:  FDSKGGEYEWVHK-PEMDTSRRRFFL

Q9H9Y2 Ribosome production factor 11.0e-7046.63Show/hide
Query:  GIIPSMIKNKEKRAEVHANLKNQKRLEKRKRVKARDAAEKQALELGEEPAPRKTPRTIENTREVDETVCKPDDEELFAGNDADEFSAVIKRDILPKVLIT
        G   S IKNK++R  +    K Q+R EK   + A+   +K+   LG++  P+  P+TI+N R  DET   P+DEE+      DEF++   +   PK+LIT
Subjt:  GIIPSMIKNKEKRAEVHANLKNQKRLEKRKRVKARDAAEKQALELGEEPAPRKTPRTIENTREVDETVCKPDDEELFAGNDADEFSAVIKRDILPKVLIT

Query:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKEFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELV
        T             +L +VIPN+H Y R    LKKII    A++FT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++
Subjt:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKEFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELV

Query:  LTNFTTRLGLRVGRLIQSLFPQDPKFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKEADSKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQHGT
        L NFTTRLG  +GR+  SLFP +P+F GR+V TFHNQRD++FFR HRYIF S++                           +QE GPRFT+KL SLQ GT
Subjt:  LTNFTTRLGLRVGRLIQSLFPQDPKFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKEADSKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQHGT

Query:  FDSKGGEYEWVHKP-EMDTSRRRFFL
        FDSK GEYEWVHKP EMDTSRR+F L
Subjt:  FDSKGGEYEWVHKP-EMDTSRRRFFL

Arabidopsis top hitse value%identityAlignment
AT1G63780.1 Ribosomal RNA processing Brix domain protein1.8e-3838.37Show/hide
Query:  DEFSAVIKRDILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKEFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLR
        DE++   + D  PK+L+TT R  S     F  EL  V PN+    RG+  + +IIE A + +FT +++VH  R   DGL+I  LP GPTA+F + NVV R
Subjt:  DEFSAVIKRDILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKEFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLR

Query:  KDI---KNHGNPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPKFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKEADSKSKSKDTKGEKVSQQKVVA
         DI   K+ G      P L+  NFTT++G RVG +++ +FP  PK   +R+VTF NQ D++ FR+H Y      +K E   KS                 
Subjt:  KDI---KNHGNPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPKFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKEADSKSKSKDTKGEKVSQQKVVA

Query:  RLQECGPRFTMKLISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
         L+E GPRF ++L  ++ GT +    E EWV +P M+TS++R F+
Subjt:  RLQECGPRFTMKLISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

AT4G01560.1 Ribosomal RNA processing Brix domain protein1.9e-13672.26Show/hide
Query:  KKSRGIIPSMIKNKEKRAEVHANLKNQKRLEKRKRVKARDAAEKQALELGEEPAPRKTPRTIENTREVDETVCKPDDEELFAGNDADEFSAVIKRDILPK
        +K   I+PSMIKNK+KR++V+A  K++K+LEK+K+++ARDAAEK+ALELGEEP  +  P+TIENTRE DETVC+PDDEELFA  DADEF+ V++R+I PK
Subjt:  KKSRGIIPSMIKNKEKRAEVHANLKNQKRLEKRKRVKARDAAEKQALELGEEPAPRKTPRTIENTREVDETVCKPDDEELFAGNDADEFSAVIKRDILPK

Query:  VLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKEFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPTSHEP
        VL+TTCRFNST GPA ISELLSVIPN+HY KRGT DLKKI+EYA  K+FTSL+VVHT+RR+ D LLIIGLP GPTAHFK+SN+VLRKDIKNHGNPTSH+P
Subjt:  VLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKEFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPTSHEP

Query:  ELVLTNFTTRLGLRVGRLIQSLFPQDPKFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKEADSKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQ
        ELVL NFTTRLG RVGR  QSLFP DP FRGRRVVTFHNQRDF+FFRHHRYIFE+KE             +K +K  ++ +  RLQECGPRFT+KL++LQ
Subjt:  ELVLTNFTTRLGLRVGRLIQSLFPQDPKFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKEADSKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQ

Query:  HGTFDSKGGEYEWVHKPEMDTSRRRFFL
        HGTFD+KGGE+EWVHKPEMDTSRRRFFL
Subjt:  HGTFDSKGGEYEWVHKPEMDTSRRRFFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGAGGAGAAGAAGAGCAGGGGTATAATCCCCTCAATGATAAAGAACAAAGAAAAGAGGGCAGAAGTACATGCCAATCTCAAGAACCAGAAGAGGCTTGAGAAACG
CAAGAGGGTCAAGGCTCGCGATGCTGCTGAAAAACAAGCCCTTGAACTTGGAGAAGAACCTGCACCTAGGAAGACTCCTCGCACCATTGAAAATACGAGGGAGGTCGATG
AGACGGTTTGCAAACCAGATGACGAAGAGCTATTTGCTGGAAATGATGCTGACGAATTTAGTGCCGTCATTAAGCGGGACATTTTACCAAAAGTTTTAATTACTACTTGT
CGTTTTAATTCTACTATTGGACCTGCCTTTATATCAGAGTTGCTTTCAGTGATACCAAATGCACATTACTACAAGAGAGGAACTAACGATCTGAAGAAGATTATAGAATA
TGCAAATGCCAAGGAGTTCACTTCTTTGATGGTTGTTCATACGAGTAGGAGGAAATTGGATGGCCTCCTAATTATTGGCTTACCTGAGGGGCCTACTGCCCATTTTAAGA
TATCAAATGTTGTCTTACGTAAGGATATTAAGAATCATGGAAATCCAACCAGCCATGAGCCAGAGCTTGTATTGACTAACTTCACAACACGCCTTGGTCTTCGTGTTGGA
AGATTAATACAGTCACTGTTCCCTCAAGACCCTAAGTTTCGTGGTAGACGAGTTGTTACTTTTCACAACCAACGTGATTTTGTATTCTTTCGGCACCATCGATACATTTT
TGAAAGCAAGGAAAATAAAAAAGAGGCCGACTCCAAAAGTAAGTCCAAGGATACGAAGGGTGAGAAAGTTTCTCAGCAGAAAGTAGTTGCCCGGCTTCAGGAATGCGGTC
CTCGTTTCACAATGAAACTGATCAGTTTGCAGCATGGAACTTTCGATTCGAAAGGCGGGGAATACGAGTGGGTTCATAAGCCTGAAATGGATACAAGCCGCAGAAGATTC
TTCTTGTGA
mRNA sequenceShow/hide mRNA sequence
CGTGGTTTTAACTTTGAAGCCGCTCTTTTCTTCTCCTCCGGCGTCGTCGTCTTCTTCCTCTGCCGAAATCGATCATTTTTGGTTGATCTAGGAGTATAGATGGGAGAGGA
GAAGAAGAGCAGGGGTATAATCCCCTCAATGATAAAGAACAAAGAAAAGAGGGCAGAAGTACATGCCAATCTCAAGAACCAGAAGAGGCTTGAGAAACGCAAGAGGGTCA
AGGCTCGCGATGCTGCTGAAAAACAAGCCCTTGAACTTGGAGAAGAACCTGCACCTAGGAAGACTCCTCGCACCATTGAAAATACGAGGGAGGTCGATGAGACGGTTTGC
AAACCAGATGACGAAGAGCTATTTGCTGGAAATGATGCTGACGAATTTAGTGCCGTCATTAAGCGGGACATTTTACCAAAAGTTTTAATTACTACTTGTCGTTTTAATTC
TACTATTGGACCTGCCTTTATATCAGAGTTGCTTTCAGTGATACCAAATGCACATTACTACAAGAGAGGAACTAACGATCTGAAGAAGATTATAGAATATGCAAATGCCA
AGGAGTTCACTTCTTTGATGGTTGTTCATACGAGTAGGAGGAAATTGGATGGCCTCCTAATTATTGGCTTACCTGAGGGGCCTACTGCCCATTTTAAGATATCAAATGTT
GTCTTACGTAAGGATATTAAGAATCATGGAAATCCAACCAGCCATGAGCCAGAGCTTGTATTGACTAACTTCACAACACGCCTTGGTCTTCGTGTTGGAAGATTAATACA
GTCACTGTTCCCTCAAGACCCTAAGTTTCGTGGTAGACGAGTTGTTACTTTTCACAACCAACGTGATTTTGTATTCTTTCGGCACCATCGATACATTTTTGAAAGCAAGG
AAAATAAAAAAGAGGCCGACTCCAAAAGTAAGTCCAAGGATACGAAGGGTGAGAAAGTTTCTCAGCAGAAAGTAGTTGCCCGGCTTCAGGAATGCGGTCCTCGTTTCACA
ATGAAACTGATCAGTTTGCAGCATGGAACTTTCGATTCGAAAGGCGGGGAATACGAGTGGGTTCATAAGCCTGAAATGGATACAAGCCGCAGAAGATTCTTCTTGTGACA
TGCTCAGTGGAGTTTCATTGCTTGTATTTCCGTTAGTAAGAGTTGCTGTGCTTATGGGCAGACCGTCGATAAAATATAAATCTCCTTTTTGGCCTGCTTGTATGTTACAA
GTTCATTTATTTTCACTAAAAATTTTGTAGCATTGTCTTTAAGGTTGTTTCAAAATTAATTAATTGATCATATACACATCTCCCAAATCCCCTTCACGATTAAATCATAT
CACTCACCAGAACTTTGGAGAATTCACTCTTACAATTGTCAG
Protein sequenceShow/hide protein sequence
MGEEKKSRGIIPSMIKNKEKRAEVHANLKNQKRLEKRKRVKARDAAEKQALELGEEPAPRKTPRTIENTREVDETVCKPDDEELFAGNDADEFSAVIKRDILPKVLITTC
RFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKEFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPTSHEPELVLTNFTTRLGLRVG
RLIQSLFPQDPKFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKEADSKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQHGTFDSKGGEYEWVHKPEMDTSRRRF
FL