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Sed0016679 (gene) of Chayote v1 genome

Gene IDSed0016679
OrganismSechium edule (Chayote v1)
DescriptionAuxin-responsive protein
Genome locationLG14:3123204..3124404
RNA-Seq ExpressionSed0016679
SyntenySed0016679
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604342.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]6.7e-5283.97Show/hide
Query:  MLGKKMVSFKKLANKVKVRAGAD-EKPHNESLL---LESSENHDSQSPSSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVV
        MLGKKMVSFKKLA KVKVR G + E  +NE LL   LE  E+HDSQSP+STPTGSFA+YVGDERQRFVVPTSFLSHPLF+MLLDKAYREFGFEQRNAL+V
Subjt:  MLGKKMVSFKKLANKVKVRAGAD-EKPHNESLL---LESSENHDSQSPSSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVV

Query:  PCSVSAFQGIVSAVECCNGRFDFGEIVEEFL
        PCSVSAFQ IVSAVECCNGRFDFGE+VEEFL
Subjt:  PCSVSAFQGIVSAVECCNGRFDFGEIVEEFL

KAG7027194.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-5185.07Show/hide
Query:  MLGKKMVSFKKLANKVKVRAG--ADEKPHNESLL---LESSENHDSQSPS--STPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNA
        MLGKKMVSFKKLA KVKVR G   +   HNE LL   LESS++HDS SPS  STPTGSFAVYVGDERQRFVVPTSFLSHPLF+MLLDKAYREFGFEQRNA
Subjt:  MLGKKMVSFKKLANKVKVRAG--ADEKPHNESLL---LESSENHDSQSPS--STPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNA

Query:  LVVPCSVSAFQGIVSAVECCNGRFDFGEIVEEFL
        LVVPCSVSAFQ IVSAVECCNGRFDFGEIVEEFL
Subjt:  LVVPCSVSAFQGIVSAVECCNGRFDFGEIVEEFL

XP_022925979.1 auxin-induced protein 15A [Cucurbita moschata]3.0e-5284.73Show/hide
Query:  MLGKKMVSFKKLANKVKVRAGAD-EKPHNESLL---LESSENHDSQSPSSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVV
        MLGKKMVSFKKLA KVKVR G + E  +NE LL   LE  E+HDSQSPSSTPTGSFA+YVGDERQRFVVPTSFLSHPLF+MLLDKAYREFGFEQRNAL+V
Subjt:  MLGKKMVSFKKLANKVKVRAGAD-EKPHNESLL---LESSENHDSQSPSSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVV

Query:  PCSVSAFQGIVSAVECCNGRFDFGEIVEEFL
        PCSVSAFQ IVSAVECCNGRFDFGE+VEEFL
Subjt:  PCSVSAFQGIVSAVECCNGRFDFGEIVEEFL

XP_022972619.1 auxin-responsive protein SAUR50-like [Cucurbita maxima]3.0e-5286.47Show/hide
Query:  MLGKKMVSFKKLANKVKVRAGAD-EKPHNESLL---LESSENHDSQSPS--STPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNAL
        MLGKKMVSFKKLA KVKVR G + E  HNE LL   LESS++HDS SPS  STPTGSFAVYVGDERQRFVVPTSFLSHPLF+MLLDKAYREFGFEQRNAL
Subjt:  MLGKKMVSFKKLANKVKVRAGAD-EKPHNESLL---LESSENHDSQSPS--STPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNAL

Query:  VVPCSVSAFQGIVSAVECCNGRFDFGEIVEEFL
        VVPCSVSAFQ IVSAVECCNGRFDFGEIVEEFL
Subjt:  VVPCSVSAFQGIVSAVECCNGRFDFGEIVEEFL

XP_023517185.1 auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo]1.1e-5185.07Show/hide
Query:  MLGKKMVSFKKLANKVKVRAG--ADEKPHNESLL---LESSENHDSQSPS--STPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNA
        MLGKKMVSFKKLA KVKVR G   +   HNE LL   LESS++HDS SPS  STPTGSFAVYVGDERQRFVVPTSFLSHPLF+MLLDKAYREFGFEQRNA
Subjt:  MLGKKMVSFKKLANKVKVRAG--ADEKPHNESLL---LESSENHDSQSPS--STPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNA

Query:  LVVPCSVSAFQGIVSAVECCNGRFDFGEIVEEFL
        LVVPCSVSAFQ IVSAVECCNGRFDFGEIVEEFL
Subjt:  LVVPCSVSAFQGIVSAVECCNGRFDFGEIVEEFL

TrEMBL top hitse value%identityAlignment
A0A6J1BYB1 auxin-responsive protein SAUR159.5e-5284.44Show/hide
Query:  MLGKKMVSFKKLANKVKVRAGAD----EKPHNESLL---LESSENHDSQSP-SSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRN
        MLGKKMVSFKKLA KVKVRAG D    E  H+ESLL   LE SE+ +SQSP SSTPTGSFA+YVGDERQRFVVPTSFLSHPLF+M+LDKAYREFGFEQRN
Subjt:  MLGKKMVSFKKLANKVKVRAGAD----EKPHNESLL---LESSENHDSQSP-SSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRN

Query:  ALVVPCSVSAFQGIVSAVECCNGRFDFGEIVEEFL
        ALVVPCSVSAFQ IVSAVECCNGRFDFGEIVEEFL
Subjt:  ALVVPCSVSAFQGIVSAVECCNGRFDFGEIVEEFL

A0A6J1EDQ2 auxin-induced protein 15A1.5e-5284.73Show/hide
Query:  MLGKKMVSFKKLANKVKVRAGAD-EKPHNESLL---LESSENHDSQSPSSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVV
        MLGKKMVSFKKLA KVKVR G + E  +NE LL   LE  E+HDSQSPSSTPTGSFA+YVGDERQRFVVPTSFLSHPLF+MLLDKAYREFGFEQRNAL+V
Subjt:  MLGKKMVSFKKLANKVKVRAGAD-EKPHNESLL---LESSENHDSQSPSSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVV

Query:  PCSVSAFQGIVSAVECCNGRFDFGEIVEEFL
        PCSVSAFQ IVSAVECCNGRFDFGE+VEEFL
Subjt:  PCSVSAFQGIVSAVECCNGRFDFGEIVEEFL

A0A6J1HIA1 auxin-induced protein 6B-like9.5e-5283.82Show/hide
Query:  MLGKKMVSFKKLANKVKVRAG--ADEKPHNESLL---LESSENHDSQSPS----STPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQR
        MLGKKMVSFKKLA KVKVR G   +   HNE LL   LESS++HDS SPS    STPTGSFAVYVGDERQRFVVPTSFLSHPLF+MLLDKAYREFGFEQR
Subjt:  MLGKKMVSFKKLANKVKVRAG--ADEKPHNESLL---LESSENHDSQSPS----STPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQR

Query:  NALVVPCSVSAFQGIVSAVECCNGRFDFGEIVEEFL
        NALVVPCSVSAFQ IVSAVECCNGRFDFGEIVEEFL
Subjt:  NALVVPCSVSAFQGIVSAVECCNGRFDFGEIVEEFL

A0A6J1IC38 auxin-responsive protein SAUR50-like1.5e-5286.47Show/hide
Query:  MLGKKMVSFKKLANKVKVRAGAD-EKPHNESLL---LESSENHDSQSPS--STPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNAL
        MLGKKMVSFKKLA KVKVR G + E  HNE LL   LESS++HDS SPS  STPTGSFAVYVGDERQRFVVPTSFLSHPLF+MLLDKAYREFGFEQRNAL
Subjt:  MLGKKMVSFKKLANKVKVRAGAD-EKPHNESLL---LESSENHDSQSPS--STPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNAL

Query:  VVPCSVSAFQGIVSAVECCNGRFDFGEIVEEFL
        VVPCSVSAFQ IVSAVECCNGRFDFGEIVEEFL
Subjt:  VVPCSVSAFQGIVSAVECCNGRFDFGEIVEEFL

A0A6J1ILC7 auxin-induced protein 15A-like4.7e-5183.21Show/hide
Query:  MLGKKMVSFKKLANKVKVRAGAD-EKPHNESLL---LESSENHDSQSPSSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVV
        MLGKKMVSFKKLA KVKVR G + E  +NE LL   LE  E+HDSQSPS+TPTGSFA+YVGDERQRFVVPTSFLSHPLF+MLLDKAYREFGFEQRNAL+V
Subjt:  MLGKKMVSFKKLANKVKVRAGAD-EKPHNESLL---LESSENHDSQSPSSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVV

Query:  PCSVSAFQGIVSAVECCNGRFDFGEIVEEFL
        PCSVSAFQ IVSAVEC NGRFDFGE+VEEFL
Subjt:  PCSVSAFQGIVSAVECCNGRFDFGEIVEEFL

SwissProt top hitse value%identityAlignment
O64538 Auxin-responsive protein SAUR401.5e-0939.39Show/hide
Query:  SSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVVPCSVSAFQGIVSAV
        SS P+G   V VG++++RFVV    L+HP+F  LL+++ +E+G+ Q+  L +PC+V  F+ +V ++
Subjt:  SSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVVPCSVSAFQGIVSAV

O65695 Auxin-responsive protein SAUR505.4e-1246.27Show/hide
Query:  PSSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVVPCSVSAFQGIVSAV
        P   P G F VYVG+ R R++VP SFL+HP F+ LL +A  EFGF+    L +PC    FQ + S +
Subjt:  PSSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVVPCSVSAFQGIVSAV

P0DKL1 Auxin-responsive protein SAUR501.0e-1041.1Show/hide
Query:  NHDSQSPSSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVVPCSVSAFQGIVSAV
        N DS  P+  P G F VYVG+ R R++VP S L HP F+ LL ++  EFGF     +++PC    F    S +
Subjt:  NHDSQSPSSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVVPCSVSAFQGIVSAV

P32295 Indole-3-acetic acid-induced protein ARG78.6e-1042.86Show/hide
Query:  SSENHDSQSPSSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQ-RNALVVPCSVSAFQGIVSAV
        S+ N  S      P G  AVYVG+  +RFV+P S L+ PLF+ LL +A  EFG++     L +PCS   FQ I S +
Subjt:  SSENHDSQSPSSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQ-RNALVVPCSVSAFQGIVSAV

Q9LTV3 Auxin-responsive protein SAUR724.1e-1240.96Show/hide
Query:  NESLLLESSENHDSQSPSSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVVPCSVSAFQGIVSAV
        +ES L  S      +  SS P G   VYVGDE +RFVV    L+HP+F  LL+++ +E+G+EQ+  L +PC V  F+ I+ ++
Subjt:  NESLLLESSENHDSQSPSSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVVPCSVSAFQGIVSAV

Arabidopsis top hitse value%identityAlignment
AT2G36210.1 SAUR-like auxin-responsive protein family2.3e-3457.35Show/hide
Query:  MLGKKMVSFKKLANKVK-----VRAGAD---EKPHNESLLLESSENHDSQSPSSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREF-GFEQR
        MLGK++ SFK LA K+K      R+G +   E  +NESLL+  ++   +   S TPTG+FAVYVG+ER + VVPTS+L+HPLF+MLLDK++ EF  FEQ+
Subjt:  MLGKKMVSFKKLANKVK-----VRAGAD---EKPHNESLLLESSENHDSQSPSSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREF-GFEQR

Query:  NALVVPCSVSAFQGIVSAVECCNGRFDFGEIVEEFL
          LVVPCS+S FQ +V+AVE CNG FDFGE VEEFL
Subjt:  NALVVPCSVSAFQGIVSAVECCNGRFDFGEIVEEFL

AT3G43120.1 SAUR-like auxin-responsive protein family1.1e-1546.91Show/hide
Query:  ESSENHDSQSPS---STPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVVPCSVSAFQGIVSAVE
        +S E    QSP      P G  AVYVG E +RF++PT+FLSH LFK+LL+KA  E+GF+   AL +PC V  F+ ++  +E
Subjt:  ESSENHDSQSPS---STPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVVPCSVSAFQGIVSAVE

AT5G20810.1 SAUR-like auxin-responsive protein family5.7e-1751.43Show/hide
Query:  QSPSSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVVPCSVSAFQGIVSAVE
        + P   P G+ AVYVG E +RF++PTS+LSH LFK+LL+KA  EFGF+Q  AL +PC V  F+ ++  +E
Subjt:  QSPSSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVVPCSVSAFQGIVSAVE

AT5G20810.2 SAUR-like auxin-responsive protein family5.7e-1751.43Show/hide
Query:  QSPSSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVVPCSVSAFQGIVSAVE
        + P   P G+ AVYVG E +RF++PTS+LSH LFK+LL+KA  EFGF+Q  AL +PC V  F+ ++  +E
Subjt:  QSPSSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVVPCSVSAFQGIVSAVE

AT5G66260.1 SAUR-like auxin-responsive protein family5.9e-1446.97Show/hide
Query:  SSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVVPCSVSAFQGIVSAV
        +  P G F VYVG  R R V+P SFL+HP+F+MLL ++  EFGF Q N L +PC    F+ ++S++
Subjt:  SSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVVPCSVSAFQGIVSAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAGGCAAGAAAATGGTGTCCTTCAAGAAACTCGCCAACAAGGTGAAGGTCCGGGCCGGAGCCGACGAGAAACCGCACAACGAGAGTTTGCTGCTGGAATCGTCGGA
GAATCACGATTCGCAGTCGCCGTCGTCTACTCCGACCGGATCCTTCGCGGTTTACGTCGGCGACGAGCGGCAGCGGTTCGTCGTTCCGACGAGCTTCCTGTCGCATCCGC
TCTTCAAGATGCTGCTCGATAAAGCGTACAGAGAGTTCGGATTCGAGCAGAGGAACGCGCTTGTCGTTCCTTGCAGCGTCTCGGCTTTTCAAGGAATTGTTAGCGCGGTT
GAGTGCTGTAATGGTAGATTCGATTTCGGCGAGATTGTCGAGGAGTTTCTTTAG
mRNA sequenceShow/hide mRNA sequence
CCCGCCTCCATTCTTGTATAAAACCCATTTTCCATATCCATGGATTCCAAGCTCCATCTTCACAAACCCTAGCCACTGCTCTGCAACCTCTTCCTTCAAAAATGCTAGGC
AAGAAAATGGTGTCCTTCAAGAAACTCGCCAACAAGGTGAAGGTCCGGGCCGGAGCCGACGAGAAACCGCACAACGAGAGTTTGCTGCTGGAATCGTCGGAGAATCACGA
TTCGCAGTCGCCGTCGTCTACTCCGACCGGATCCTTCGCGGTTTACGTCGGCGACGAGCGGCAGCGGTTCGTCGTTCCGACGAGCTTCCTGTCGCATCCGCTCTTCAAGA
TGCTGCTCGATAAAGCGTACAGAGAGTTCGGATTCGAGCAGAGGAACGCGCTTGTCGTTCCTTGCAGCGTCTCGGCTTTTCAAGGAATTGTTAGCGCGGTTGAGTGCTGT
AATGGTAGATTCGATTTCGGCGAGATTGTCGAGGAGTTTCTTTAGAACAGATTGATTGTACAGGAATCGTTCGATCTTTTCGGTGAGGATTTTCGTCTTCGATTTCTGTT
TGAACCGAAGAGGATTTGATCTGATTCGCGATTCTATTCGATTTCGGCGAGATTGTTGTGGAATTTCTTTAGAACAGATCAAATGCAGAGGAATTTCAAATCGCTAGGGC
TCGAATCGTCTGATCCTTTCGGTAAAGAAATTCGTCTTCGATTTCTGTTTAAACTGAAGAGGATTTGATTTGATCCGATTCGATTCGATTTTGTTCGATTGAATTCGACC
GATTTTACTGTTCGATTGGCTGAGAATATGAATCTCAATTCGATTTCGGCGAAATTGTCGAGGATTTTCTGTAGAACAGATCAAATGCAGAGGAATATCAAATCGTTTGA
TCTTTTCGGTAAGGAATTTCATCTTCGATTTCTGTTTAAACTGAAGAGGATTTTGATTTTGATTCGATTCTGTTGGAATGAATTTGGCGGATTTTACTGTTCGATTGGAT
GTGAATGTGAATCTTTTCAATTCAGATCCAATTGGATTTGTTGATTCATTTTTCTTCGGAATTGTAAAATGAGAGCTGTAATTCTTGGATGAAATTGAATTTGTCATTTG
TAATTTGTAGTTTGTCATTACTATGTATGAACATAAATTTTTATTTAGGTAATTTGTCAACTTTCTTGACAGTTTTTTTTTCTTGGTAGCTGGCATTGCCG
Protein sequenceShow/hide protein sequence
MLGKKMVSFKKLANKVKVRAGADEKPHNESLLLESSENHDSQSPSSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVVPCSVSAFQGIVSAV
ECCNGRFDFGEIVEEFL