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Sed0016688 (gene) of Chayote v1 genome

Gene IDSed0016688
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG12:34362444..34363063
RNA-Seq ExpressionSed0016688
SyntenySed0016688
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
J3LQB5 Uncharacterized protein4.3e-0641.2Show/hide
Query:  MVDDVSRISRKRRHGANINPPTRNVEAKMPMKTSKAEMLMSKSKAKMPTRDANEECRSRDANEGDANEGNANEECRSRDANKECRSRDANEE----DANE
        + D  ++  R+RR         R +  +   +T+ A     +      + DA+EE  S DA+E +++  +A+EE  S DA++E  S DA+EE    DA+E
Subjt:  MVDDVSRISRKRRHGANINPPTRNVEAKMPMKTSKAEMLMSKSKAKMPTRDANEECRSRDANEGDANEGNANEECRSRDANKECRSRDANEE----DANE

Query:  ESQSRDANK----GNANEECRSRDANEE----DANEESQSRDANEECRSWDANEECRSRDANEECRSRDANEE----DANEESQSRDANEETQSRDANNK
        ES S DA++     +A+EE  S DA+EE    DA+EES S DA+EE  S DA+EE  S DA+EE  S DA+EE    DA+EES S DA+EE+ S DA+ +
Subjt:  ESQSRDANK----GNANEECRSRDANEE----DANEESQSRDANEECRSWDANEECRSRDANEECRSRDANEE----DANEESQSRDANEETQSRDANNK

Query:  SQSRDANDESQNRDAK
        S S DA++ES + DA+
Subjt:  SQSRDANDESQNRDAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGATGATGTCTCACGGATTTCGAGGAAAAGAAGGCACGGTGCGAACATAAATCCGCCGACAAGGAATGTCGAAGCCAAGATGCCAATGAAGACATCCAAAGCCGA
GATGCTAATGAGTAAATCCAAAGCCAAAATGCCAACTCGGGATGCCAATGAGGAATGTCGAAGTCGGGATGCCAACGAGGGAGATGCCAATGAGGGAAATGCCAACGAGG
AATGTCGAAGCCGGGATGCCAACAAGGAATGTCGAAGCCGGGACGCCAACGAGGAAGATGCCAATGAGGAAAGTCAAAGCCGAGATGCTAATAAGGGAAATGCTAATGAG
GAATGTCGAAGCCGGGATGCCAACGAGGAAGATGCCAATGAGGAAAGTCAAAGCCGAGATGCTAATGAGGAATGTCGAAGCTGGGATGCCAACGAGGAATGTCGAAGCCG
GGATGCCAACGAGGAATGTCGAAGCCGGGACGCCAATGAGGAAGATGCCAATGAGGAAAGTCAAAGCCGAGATGCTAATGAGGAAACTCAAAGCCGAGATGCCAACAACA
AAAGTCAAAGCCGAGATGCCAACGACGAAAGTCAAAACCGAGATGCCAAGGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGATGATGTCTCACGGATTTCGAGGAAAAGAAGGCACGGTGCGAACATAAATCCGCCGACAAGGAATGTCGAAGCCAAGATGCCAATGAAGACATCCAAAGCCGA
GATGCTAATGAGTAAATCCAAAGCCAAAATGCCAACTCGGGATGCCAATGAGGAATGTCGAAGTCGGGATGCCAACGAGGGAGATGCCAATGAGGGAAATGCCAACGAGG
AATGTCGAAGCCGGGATGCCAACAAGGAATGTCGAAGCCGGGACGCCAACGAGGAAGATGCCAATGAGGAAAGTCAAAGCCGAGATGCTAATAAGGGAAATGCTAATGAG
GAATGTCGAAGCCGGGATGCCAACGAGGAAGATGCCAATGAGGAAAGTCAAAGCCGAGATGCTAATGAGGAATGTCGAAGCTGGGATGCCAACGAGGAATGTCGAAGCCG
GGATGCCAACGAGGAATGTCGAAGCCGGGACGCCAATGAGGAAGATGCCAATGAGGAAAGTCAAAGCCGAGATGCTAATGAGGAAACTCAAAGCCGAGATGCCAACAACA
AAAGTCAAAGCCGAGATGCCAACGACGAAAGTCAAAACCGAGATGCCAAGGAGTGA
Protein sequenceShow/hide protein sequence
MVDDVSRISRKRRHGANINPPTRNVEAKMPMKTSKAEMLMSKSKAKMPTRDANEECRSRDANEGDANEGNANEECRSRDANKECRSRDANEEDANEESQSRDANKGNANE
ECRSRDANEEDANEESQSRDANEECRSWDANEECRSRDANEECRSRDANEEDANEESQSRDANEETQSRDANNKSQSRDANDESQNRDAKE