; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0016691 (gene) of Chayote v1 genome

Gene IDSed0016691
OrganismSechium edule (Chayote v1)
Descriptionprotein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic
Genome locationLG03:13628..14668
RNA-Seq ExpressionSed0016691
SyntenySed0016691
Gene Ontology termsNA
InterPro domainsIPR036410 - Heat shock protein DnaJ, cysteine-rich domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7033428.1 hypothetical protein SDJN02_07484 [Cucurbita argyrosperma subsp. argyrosperma]1.9e-3468.7Show/hide
Query:  MAWC---CNHHPASSFRFISPKSRSS---NSKSKMRPSNNIPFAASAAKFSMPKRCNKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFQCQGFGLKSCP
        MAWC    +    S+F F  P    +    +K + +PS NIPFAA A KFS+PKRC  CGGKGAIDCPGCKGTG+NKKNGNIFERWKCF+CQGFGLKSCP
Subjt:  MAWC---CNHHPASSFRFISPKSRSS---NSKSKMRPSNNIPFAASAAKFSMPKRCNKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFQCQGFGLKSCP

Query:  DCGNGGLTPEQRGER
        DCG GGLTPEQRGER
Subjt:  DCGNGGLTPEQRGER

XP_022152486.1 uncharacterized protein LOC111020203 [Momordica charantia]5.4e-3483.13Show/hide
Query:  SKMRPSNNIPFAASAAKFSMPKRCNKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFQCQGFGLKSCPDCGNGGLTPEQRGER
        +K +  +NI F A AA FS+PKRC KCGGKGAIDCPGCKGTGKNKKNGNIFERWKCF+CQGFGLKSCP+CGNGGLTPEQRGER
Subjt:  SKMRPSNNIPFAASAAKFSMPKRCNKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFQCQGFGLKSCPDCGNGGLTPEQRGER

XP_022963874.1 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic [Cucurbita moschata]9.3e-3467.83Show/hide
Query:  MAWC-----CNHHPASSFRFISPKSRSSNSKSKMRPS-NNIPFAASAAKFSMPKRCNKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFQCQGFGLKSCP
        MAWC      +++  S F F  P   +   ++K R   +NIPFAA A KFS+PKRC  CGGKGAIDCPGCKGTG+NKKNGNIFERWKCF+CQGFGLKSCP
Subjt:  MAWC-----CNHHPASSFRFISPKSRSSNSKSKMRPS-NNIPFAASAAKFSMPKRCNKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFQCQGFGLKSCP

Query:  DCGNGGLTPEQRGER
        DCG GGLTPEQRGER
Subjt:  DCGNGGLTPEQRGER

XP_022990183.1 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic [Cucurbita maxima]4.2e-3468.7Show/hide
Query:  MAWC---CNHHPASSFRFISPKSRSS---NSKSKMRPSNNIPFAASAAKFSMPKRCNKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFQCQGFGLKSCP
        MAWC    +    S+F F  P    +    +KS+ +PS NIPFAA A KFS+PKRC  CGGKGAIDC GCKGTG+NKKNGNIFERWKCF+CQGFGLKSCP
Subjt:  MAWC---CNHHPASSFRFISPKSRSS---NSKSKMRPSNNIPFAASAAKFSMPKRCNKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFQCQGFGLKSCP

Query:  DCGNGGLTPEQRGER
        DCG GGLTPEQRGER
Subjt:  DCGNGGLTPEQRGER

XP_023521952.1 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic-like [Cucurbita pepo subsp. pepo]4.9e-3569.57Show/hide
Query:  MAWC---CNHHPASSFRFISPKSRSS---NSKSKMRPSNNIPFAASAAKFSMPKRCNKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFQCQGFGLKSCP
        MAWC    +    S+F F  P    +    +KS+ +PS NIPFAA A KFS+PKRC  CGGKGAIDCPGCKGTG+NKKNGNIFERWKCF+CQGFGLKSCP
Subjt:  MAWC---CNHHPASSFRFISPKSRSS---NSKSKMRPSNNIPFAASAAKFSMPKRCNKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFQCQGFGLKSCP

Query:  DCGNGGLTPEQRGER
        DCG GGLTPEQRGER
Subjt:  DCGNGGLTPEQRGER

TrEMBL top hitse value%identityAlignment
A0A0A0LIM5 Uncharacterized protein3.2e-3272.92Show/hide
Query:  FISPKSRSSNSKSKMRPSNNI-PFAASAAKFSMPKRCNKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFQCQGFGLKSCPDCGNGGLTPEQRGER
        F  P  +   SK K  P++ I PFAA      +PKRC KCGGKGAIDCPGCKGTGKNKKNGNIFERWKCF+CQGFGLKSCP CG GGLTPEQRGER
Subjt:  FISPKSRSSNSKSKMRPSNNI-PFAASAAKFSMPKRCNKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFQCQGFGLKSCPDCGNGGLTPEQRGER

A0A1S3C9W1 protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic1.3e-3372.63Show/hide
Query:  FISPKSRSSNSKSKMRPSNNIPFAASAAKFSMPKRCNKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFQCQGFGLKSCPDCGNGGLTPEQRGER
        F  P  +   SK+K  P+  +PFAA      +PKRC KCGGKGAIDCPGCKGTGKNKKNGNIFERWKCF+CQGFGLKSCP CG GGLTPEQRGER
Subjt:  FISPKSRSSNSKSKMRPSNNIPFAASAAKFSMPKRCNKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFQCQGFGLKSCPDCGNGGLTPEQRGER

A0A6J1DHW0 uncharacterized protein LOC1110202032.6e-3483.13Show/hide
Query:  SKMRPSNNIPFAASAAKFSMPKRCNKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFQCQGFGLKSCPDCGNGGLTPEQRGER
        +K +  +NI F A AA FS+PKRC KCGGKGAIDCPGCKGTGKNKKNGNIFERWKCF+CQGFGLKSCP+CGNGGLTPEQRGER
Subjt:  SKMRPSNNIPFAASAAKFSMPKRCNKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFQCQGFGLKSCPDCGNGGLTPEQRGER

A0A6J1HLG5 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic4.5e-3467.83Show/hide
Query:  MAWC-----CNHHPASSFRFISPKSRSSNSKSKMRPS-NNIPFAASAAKFSMPKRCNKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFQCQGFGLKSCP
        MAWC      +++  S F F  P   +   ++K R   +NIPFAA A KFS+PKRC  CGGKGAIDCPGCKGTG+NKKNGNIFERWKCF+CQGFGLKSCP
Subjt:  MAWC-----CNHHPASSFRFISPKSRSSNSKSKMRPS-NNIPFAASAAKFSMPKRCNKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFQCQGFGLKSCP

Query:  DCGNGGLTPEQRGER
        DCG GGLTPEQRGER
Subjt:  DCGNGGLTPEQRGER

A0A6J1JSI3 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic2.0e-3468.7Show/hide
Query:  MAWC---CNHHPASSFRFISPKSRSS---NSKSKMRPSNNIPFAASAAKFSMPKRCNKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFQCQGFGLKSCP
        MAWC    +    S+F F  P    +    +KS+ +PS NIPFAA A KFS+PKRC  CGGKGAIDC GCKGTG+NKKNGNIFERWKCF+CQGFGLKSCP
Subjt:  MAWC---CNHHPASSFRFISPKSRSS---NSKSKMRPSNNIPFAASAAKFSMPKRCNKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFQCQGFGLKSCP

Query:  DCGNGGLTPEQRGER
        DCG GGLTPEQRGER
Subjt:  DCGNGGLTPEQRGER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G22630.1 unknown protein1.1e-2981.54Show/hide
Query:  SMPKRCNKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFQCQGFGLKSCPDCGNGGLTPEQRGER
        S+ K C  CG KGAI+CPGCKGTGKNKKNGN+FERWKCF CQGFG+KSCP CG GGLTPEQRGER
Subjt:  SMPKRCNKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFQCQGFGLKSCPDCGNGGLTPEQRGER


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTGGTGTTGCAACCACCACCCTGCCTCTTCATTCCGATTCATATCCCCGAAAAGTAGGAGTAGTAATAGTAAGAGTAAGATGCGCCCATCCAACAATATCCCCTT
CGCTGCATCTGCGGCCAAGTTTTCGATGCCCAAAAGATGCAACAAGTGTGGAGGTAAAGGGGCCATCGATTGTCCTGGATGCAAGGGGACTGGAAAAAACAAGAAAAACG
GAAACATCTTCGAGCGTTGGAAATGTTTCCAGTGTCAAGGATTTGGATTAAAGAGCTGTCCTGACTGTGGAAATGGAGGACTCACCCCCGAACAAAGGGGAGAAAGATAA
mRNA sequenceShow/hide mRNA sequence
ATTTTGGGGTTTTAGGTTAAACAAGAGGGACTTGTGGAGGGTATTAAAAATAATAATAATGATAAGGAAAAAAGAAATAGTGGTGCAGCAAAGGTGGTAGGGTGGATAAT
ATGGAGTGTGAAAGTTGAGAGAGCGGAGGAGAACGCAGAATCATAATGGCGTGGTGTTGCAACCACCACCCTGCCTCTTCATTCCGATTCATATCCCCGAAAAGTAGGAG
TAGTAATAGTAAGAGTAAGATGCGCCCATCCAACAATATCCCCTTCGCTGCATCTGCGGCCAAGTTTTCGATGCCCAAAAGATGCAACAAGTGTGGAGGTAAAGGGGCCA
TCGATTGTCCTGGATGCAAGGGGACTGGAAAAAACAAGAAAAACGGAAACATCTTCGAGCGTTGGAAATGTTTCCAGTGTCAAGGATTTGGATTAAAGAGCTGTCCTGAC
TGTGGAAATGGAGGACTCACCCCCGAACAAAGGGGAGAAAGATAATCCACTACTTCAAATTATGTAATCTCAATTATGGTTGTTTTATGCTATGTTGTCACAAAATTTCT
CAACTACTCACAATTACGCCAAGCTTTCTGTTTTGATTTTAGCTTTTGTATATTTCCTCATCCCTCACTTCTTGTCTTCTTCGTCATAGATATGTCGTAAACATTCAAAA
TGATTTTGGTTGGGTTGTGCTTGGCTCGAAAACATTCACTCTCTCTTGGATATTGCTCTTGTTGGTCATCCTTTTAGAAAGGAGAAGAAGGTTCTTTGGGAGACTATCAT
CCAATCCTTCCTTTCGAATATTTGGTTAGAACGAAACAATAAGGTCTTCAATTCAAGACAAATCTTTATACTTACATAGTT
Protein sequenceShow/hide protein sequence
MAWCCNHHPASSFRFISPKSRSSNSKSKMRPSNNIPFAASAAKFSMPKRCNKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFQCQGFGLKSCPDCGNGGLTPEQRGER