| GenBank top hits | e value | %identity | Alignment |
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| KAA0031437.1 pol protein [Cucumis melo var. makuwa] | 1.0e-34 | 33.93 | Show/hide |
Query: MVCPDIQRPRCAAHVLGG-------TNEMVVGVHLERETTGSPPATWEFFKAEFKVKFISDEAQEKMVELFRNSKRVTIPLRNMRGSSRRLSRLAT----
M CP+ Q+ +CA L T E ++G + + TWE FK F KF S + ++ F N ++ + + LSR A
Subjt: MVCPDIQRPRCAAHVLGG-------TNEMVVGVHLERETTGSPPATWEFFKAEFKVKFISDEAQEKMVELFRNSKRVTIPLRNMRGSSRRLSRLAT----
Query: -------------------IYNGKYPAERVVAALFGI-LSQPE-----MGAKRGSLI-----FEAAAAAQGRFEKRSAESSTRFHRQ--TARRTRERFPH
I PA A + LS PE A RGS + E + RS R R+ A RT P
Subjt: -------------------IYNGKYPAERVVAALFGI-LSQPE-----MGAKRGSLI-----FEAAAAAQGRFEKRSAESSTRFHRQ--TARRTRERFPH
Query: VLLVGK-STLELVDRPRLCFRCGREG------TWPAFVITDYGGSNVQQVGRVFCYDRREAERHGCRCGECFLVLDHRAFVLFDSGSTHSFVSVLFGLEH
G+ + +CFRC + G F T S QQ GRVF R+EAER G +L H AFVLFDSGS+HSF+S +F ++H
Subjt: VLLVGK-STLELVDRPRLCFRCGREG------TWPAFVITDYGGSNVQQVGRVFCYDRREAERHGCRCGECFLVLDHRAFVLFDSGSTHSFVSVLFGLEH
Query: AKLRLEPLGFELSIATPSGVNMLARDKIRDGRIEISGELLVATLIVPPISGFDVILGMEWLVANHALIDRHRKEVVFRPPSAVDFKFRG
L +EPLG LS++TPSG +L++++I+ R+EI+ +L TL+V + FDVILGM+WL ANHA ID + KEVVF PPS FKFRG
Subjt: AKLRLEPLGFELSIATPSGVNMLARDKIRDGRIEISGELLVATLIVPPISGFDVILGMEWLVANHALIDRHRKEVVFRPPSAVDFKFRG
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| KAA0033825.1 pol protein [Cucumis melo var. makuwa] | 1.0e-34 | 33.93 | Show/hide |
Query: MVCPDIQRPRCAAHVLGG-------TNEMVVGVHLERETTGSPPATWEFFKAEFKVKFISDEAQEKMVELFRNSKRVTIPLRNMRGSSRRLSRLAT----
M CP+ Q+ +CA L T E ++G + + TWE FK F KF S + ++ F N ++ + + LSR A
Subjt: MVCPDIQRPRCAAHVLGG-------TNEMVVGVHLERETTGSPPATWEFFKAEFKVKFISDEAQEKMVELFRNSKRVTIPLRNMRGSSRRLSRLAT----
Query: -------------------IYNGKYPAERVVAALFGI-LSQPE-----MGAKRGSLI-----FEAAAAAQGRFEKRSAESSTRFHRQ--TARRTRERFPH
I PA A + LS PE A RGS + E + RS R R+ A RT P
Subjt: -------------------IYNGKYPAERVVAALFGI-LSQPE-----MGAKRGSLI-----FEAAAAAQGRFEKRSAESSTRFHRQ--TARRTRERFPH
Query: VLLVGK-STLELVDRPRLCFRCGREG------TWPAFVITDYGGSNVQQVGRVFCYDRREAERHGCRCGECFLVLDHRAFVLFDSGSTHSFVSVLFGLEH
G+ + +CFRC + G F T S QQ GRVF R+EAER G +L H AFVLFDSGS+HSF+S +F ++H
Subjt: VLLVGK-STLELVDRPRLCFRCGREG------TWPAFVITDYGGSNVQQVGRVFCYDRREAERHGCRCGECFLVLDHRAFVLFDSGSTHSFVSVLFGLEH
Query: AKLRLEPLGFELSIATPSGVNMLARDKIRDGRIEISGELLVATLIVPPISGFDVILGMEWLVANHALIDRHRKEVVFRPPSAVDFKFRG
L +EPLG LS++TPSG +L++++I+ R+EI+ +L TL+V + FDVILGM+WL ANHA ID + KEVVF PPS FKFRG
Subjt: AKLRLEPLGFELSIATPSGVNMLARDKIRDGRIEISGELLVATLIVPPISGFDVILGMEWLVANHALIDRHRKEVVFRPPSAVDFKFRG
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| KAA0037906.1 reverse transcriptase [Cucumis melo var. makuwa] | 3.2e-36 | 34.84 | Show/hide |
Query: MVCPDIQRPRCAAHVL--GGTNEMVVGVHLERETTGS-PPATWEFFKAEFKVKFISDEAQEKMVELFRNSKRVTIPLRNMRGSSRRLSRLAT--------
M CP+ Q+ +CA L GT ER G TWE FK F KF S + ++ F N ++ + + LSR A
Subjt: MVCPDIQRPRCAAHVL--GGTNEMVVGVHLERETTGS-PPATWEFFKAEFKVKFISDEAQEKMVELFRNSKRVTIPLRNMRGSSRRLSRLAT--------
Query: ---------------IYNGKYPAERVVAALFGI-LSQPEMGAKRGSLIFEAAAAAQGRFEKRSAESSTRFHRQ---TARRTRERFPHVLLVGK-STLELV
I PA A + LS PE +AA +KR AE+ HR+ A RT P G+ +
Subjt: ---------------IYNGKYPAERVVAALFGI-LSQPEMGAKRGSLIFEAAAAAQGRFEKRSAESSTRFHRQ---TARRTRERFPHVLLVGK-STLELV
Query: DRPRLCFRCGREG------TWPAFVITDYGGSNVQQVGRVFCYDRREAERHGCRCGECFLVLDHRAFVLFDSGSTHSFVSVLFGLEHAKLRLEPLGFELS
+CFRC + G F T S QQ GRVF R+EAER G +L H AFVLFDSGS+HSF+S +F ++H L +EPLG LS
Subjt: DRPRLCFRCGREG------TWPAFVITDYGGSNVQQVGRVFCYDRREAERHGCRCGECFLVLDHRAFVLFDSGSTHSFVSVLFGLEHAKLRLEPLGFELS
Query: IATPSGVNMLARDKIRDGRIEISGELLVATLIVPPISGFDVILGMEWLVANHALIDRHRKEVVFRPPSAVDFKFRG
++TPSG +L++++I+ R+EI+ +L TL+V + FDVI+GM+WL ANHA ID KEVVF PPS FKF+G
Subjt: IATPSGVNMLARDKIRDGRIEISGELLVATLIVPPISGFDVILGMEWLVANHALIDRHRKEVVFRPPSAVDFKFRG
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| KAA0051440.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 2.1e-35 | 34.72 | Show/hide |
Query: MVCPDIQRPRCAAHVL--GGTNEMVVGVHLERETTGSPPATWEFFKAEFKVKFISDEAQEKMVELFRNSKRVTIPLRNMRGSSRRLSRLA--TIYNGKYP
M CP+ Q+ +CA L GT + R TW+ FK F KF S + ++ F N ++ + + LS A + +
Subjt: MVCPDIQRPRCAAHVL--GGTNEMVVGVHLERETTGSPPATWEFFKAEFKVKFISDEAQEKMVELFRNSKRVTIPLRNMRGSSRRLSRLA--TIYNGKYP
Query: AERVVAALFGILSQPEMGAK---RGSLIFE--AAAAAQGRFEKRSAESSTRFHRQ-----TARRTRERFPHVLLVGK-STLELVDRPRLCFRCGREG---
E+ V AL L + +K RGS + + +R+ S F R A RT + P G+ + +CFRC + G
Subjt: AERVVAALFGILSQPEMGAK---RGSLIFE--AAAAAQGRFEKRSAESSTRFHRQ-----TARRTRERFPHVLLVGK-STLELVDRPRLCFRCGREG---
Query: ---TWPAFVITDYGGSNVQQVGRVFCYDRREAERHGCRCGECFLVLDHRAFVLFDSGSTHSFVSVLFGLEHAKLRLEPLGFELSIATPSGVNMLARDKIR
F T + S QQ GRVF R++AER G +L H AFVLFDSGS+HSF+S +F ++H L +EPLG LS++TPSG +L+++KI+
Subjt: ---TWPAFVITDYGGSNVQQVGRVFCYDRREAERHGCRCGECFLVLDHRAFVLFDSGSTHSFVSVLFGLEHAKLRLEPLGFELSIATPSGVNMLARDKIR
Query: DGRIEISGELLVATLIVPPISGFDVILGMEWLVANHALIDRHRKEVVFRPPSAVDFKFRG
R+EI+ +L TL+V + DVILGM+WL ANHA ID KEVVF PPS FKFRG
Subjt: DGRIEISGELLVATLIVPPISGFDVILGMEWLVANHALIDRHRKEVVFRPPSAVDFKFRG
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| KAA0060821.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 5.5e-36 | 34.56 | Show/hide |
Query: MVCPDIQRPRCAAHVLGG-------TNEMVVGVHLERETTGSPPATWEFFKAEFKVKFISDEAQEKMVELFRNSKRVTIPLRNMRGSSRRLS-RLATIYN
M CP+ Q+ +CA L T E ++G ++ + TWE FK F KF S + ++ F N ++ + + M R L L I
Subjt: MVCPDIQRPRCAAHVLGG-------TNEMVVGVHLERETTGSPPATWEFFKAEFKVKFISDEAQEKMVELFRNSKRVTIPLRNMRGSSRRLS-RLATIYN
Query: GKYPAERVVAALFGILSQPEMGAKRGSLIFEAAAAAQGRFEKRSAESSTRFHRQTARRTR---ERFPHVLLVGKSTLELVDRPRLCFRCGREGTWPAFVI
PA A + ++ + +AA +KR E+ Q R+ +R L TL + C CGR
Subjt: GKYPAERVVAALFGILSQPEMGAKRGSLIFEAAAAAQGRFEKRSAESSTRFHRQTARRTR---ERFPHVLLVGKSTLELVDRPRLCFRCGREGTWPAFVI
Query: TDYGGSNVQQVG---RVFCYDRREAERHGCRCGECFLVLDHRAFVLFDSGSTHSFVSVLFGLEHAKLRLEPLGFELSIATPSGVNMLARDKIRDGRIEIS
+GG + G RVF R+EAER G +L H AFVLFDSGS+HSF+S +F + H +L +EPLG LS++TPSG +L+++KI+ R+EI+
Subjt: TDYGGSNVQQVG---RVFCYDRREAERHGCRCGECFLVLDHRAFVLFDSGSTHSFVSVLFGLEHAKLRLEPLGFELSIATPSGVNMLARDKIRDGRIEIS
Query: GELLVATLIVPPISGFDVILGMEWLVANHALIDRHRKEVVFRPPSAVDFKFRG
+L TL+V + FDVILGM+WL ANHA ID KEVVF PPS FKFRG
Subjt: GELLVATLIVPPISGFDVILGMEWLVANHALIDRHRKEVVFRPPSAVDFKFRG
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7T6U3 Reverse transcriptase | 1.6e-36 | 34.84 | Show/hide |
Query: MVCPDIQRPRCAAHVL--GGTNEMVVGVHLERETTGS-PPATWEFFKAEFKVKFISDEAQEKMVELFRNSKRVTIPLRNMRGSSRRLSRLAT--------
M CP+ Q+ +CA L GT ER G TWE FK F KF S + ++ F N ++ + + LSR A
Subjt: MVCPDIQRPRCAAHVL--GGTNEMVVGVHLERETTGS-PPATWEFFKAEFKVKFISDEAQEKMVELFRNSKRVTIPLRNMRGSSRRLSRLAT--------
Query: ---------------IYNGKYPAERVVAALFGI-LSQPEMGAKRGSLIFEAAAAAQGRFEKRSAESSTRFHRQ---TARRTRERFPHVLLVGK-STLELV
I PA A + LS PE +AA +KR AE+ HR+ A RT P G+ +
Subjt: ---------------IYNGKYPAERVVAALFGI-LSQPEMGAKRGSLIFEAAAAAQGRFEKRSAESSTRFHRQ---TARRTRERFPHVLLVGK-STLELV
Query: DRPRLCFRCGREG------TWPAFVITDYGGSNVQQVGRVFCYDRREAERHGCRCGECFLVLDHRAFVLFDSGSTHSFVSVLFGLEHAKLRLEPLGFELS
+CFRC + G F T S QQ GRVF R+EAER G +L H AFVLFDSGS+HSF+S +F ++H L +EPLG LS
Subjt: DRPRLCFRCGREG------TWPAFVITDYGGSNVQQVGRVFCYDRREAERHGCRCGECFLVLDHRAFVLFDSGSTHSFVSVLFGLEHAKLRLEPLGFELS
Query: IATPSGVNMLARDKIRDGRIEISGELLVATLIVPPISGFDVILGMEWLVANHALIDRHRKEVVFRPPSAVDFKFRG
++TPSG +L++++I+ R+EI+ +L TL+V + FDVI+GM+WL ANHA ID KEVVF PPS FKF+G
Subjt: IATPSGVNMLARDKIRDGRIEISGELLVATLIVPPISGFDVILGMEWLVANHALIDRHRKEVVFRPPSAVDFKFRG
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| A0A5A7U8E6 Ty3-gypsy retrotransposon protein | 1.0e-35 | 34.72 | Show/hide |
Query: MVCPDIQRPRCAAHVL--GGTNEMVVGVHLERETTGSPPATWEFFKAEFKVKFISDEAQEKMVELFRNSKRVTIPLRNMRGSSRRLSRLA--TIYNGKYP
M CP+ Q+ +CA L GT + R TW+ FK F KF S + ++ F N ++ + + LS A + +
Subjt: MVCPDIQRPRCAAHVL--GGTNEMVVGVHLERETTGSPPATWEFFKAEFKVKFISDEAQEKMVELFRNSKRVTIPLRNMRGSSRRLSRLA--TIYNGKYP
Query: AERVVAALFGILSQPEMGAK---RGSLIFE--AAAAAQGRFEKRSAESSTRFHRQ-----TARRTRERFPHVLLVGK-STLELVDRPRLCFRCGREG---
E+ V AL L + +K RGS + + +R+ S F R A RT + P G+ + +CFRC + G
Subjt: AERVVAALFGILSQPEMGAK---RGSLIFE--AAAAAQGRFEKRSAESSTRFHRQ-----TARRTRERFPHVLLVGK-STLELVDRPRLCFRCGREG---
Query: ---TWPAFVITDYGGSNVQQVGRVFCYDRREAERHGCRCGECFLVLDHRAFVLFDSGSTHSFVSVLFGLEHAKLRLEPLGFELSIATPSGVNMLARDKIR
F T + S QQ GRVF R++AER G +L H AFVLFDSGS+HSF+S +F ++H L +EPLG LS++TPSG +L+++KI+
Subjt: ---TWPAFVITDYGGSNVQQVGRVFCYDRREAERHGCRCGECFLVLDHRAFVLFDSGSTHSFVSVLFGLEHAKLRLEPLGFELSIATPSGVNMLARDKIR
Query: DGRIEISGELLVATLIVPPISGFDVILGMEWLVANHALIDRHRKEVVFRPPSAVDFKFRG
R+EI+ +L TL+V + DVILGM+WL ANHA ID KEVVF PPS FKFRG
Subjt: DGRIEISGELLVATLIVPPISGFDVILGMEWLVANHALIDRHRKEVVFRPPSAVDFKFRG
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| A0A5A7UBS1 Reverse transcriptase | 5.0e-35 | 33.93 | Show/hide |
Query: MVCPDIQRPRCAAHVLGG-------TNEMVVGVHLERETTGSPPATWEFFKAEFKVKFISDEAQEKMVELFRNSKRVTIPLRNMRGSSRRLSRLAT----
M CP+ Q+ +CA L T E ++G + + TWE FK F KF S + ++ F N ++ + + LSR A
Subjt: MVCPDIQRPRCAAHVLGG-------TNEMVVGVHLERETTGSPPATWEFFKAEFKVKFISDEAQEKMVELFRNSKRVTIPLRNMRGSSRRLSRLAT----
Query: -------------------IYNGKYPAERVVAALFGI-LSQPE-----MGAKRGSLI-----FEAAAAAQGRFEKRSAESSTRFHRQ--TARRTRERFPH
I PA A + LS PE A RGS + E + RS R R+ A RT P
Subjt: -------------------IYNGKYPAERVVAALFGI-LSQPE-----MGAKRGSLI-----FEAAAAAQGRFEKRSAESSTRFHRQ--TARRTRERFPH
Query: VLLVGK-STLELVDRPRLCFRCGREG------TWPAFVITDYGGSNVQQVGRVFCYDRREAERHGCRCGECFLVLDHRAFVLFDSGSTHSFVSVLFGLEH
G+ + +CFRC + G F T S QQ GRVF R+EAER G +L H AFVLFDSGS+HSF+S +F ++H
Subjt: VLLVGK-STLELVDRPRLCFRCGREG------TWPAFVITDYGGSNVQQVGRVFCYDRREAERHGCRCGECFLVLDHRAFVLFDSGSTHSFVSVLFGLEH
Query: AKLRLEPLGFELSIATPSGVNMLARDKIRDGRIEISGELLVATLIVPPISGFDVILGMEWLVANHALIDRHRKEVVFRPPSAVDFKFRG
L +EPLG LS++TPSG +L++++I+ R+EI+ +L TL+V + FDVILGM+WL ANHA ID + KEVVF PPS FKFRG
Subjt: AKLRLEPLGFELSIATPSGVNMLARDKIRDGRIEISGELLVATLIVPPISGFDVILGMEWLVANHALIDRHRKEVVFRPPSAVDFKFRG
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| A0A5A7V4X3 Ty3-gypsy retrotransposon protein | 2.7e-36 | 34.56 | Show/hide |
Query: MVCPDIQRPRCAAHVLGG-------TNEMVVGVHLERETTGSPPATWEFFKAEFKVKFISDEAQEKMVELFRNSKRVTIPLRNMRGSSRRLS-RLATIYN
M CP+ Q+ +CA L T E ++G ++ + TWE FK F KF S + ++ F N ++ + + M R L L I
Subjt: MVCPDIQRPRCAAHVLGG-------TNEMVVGVHLERETTGSPPATWEFFKAEFKVKFISDEAQEKMVELFRNSKRVTIPLRNMRGSSRRLS-RLATIYN
Query: GKYPAERVVAALFGILSQPEMGAKRGSLIFEAAAAAQGRFEKRSAESSTRFHRQTARRTR---ERFPHVLLVGKSTLELVDRPRLCFRCGREGTWPAFVI
PA A + ++ + +AA +KR E+ Q R+ +R L TL + C CGR
Subjt: GKYPAERVVAALFGILSQPEMGAKRGSLIFEAAAAAQGRFEKRSAESSTRFHRQTARRTR---ERFPHVLLVGKSTLELVDRPRLCFRCGREGTWPAFVI
Query: TDYGGSNVQQVG---RVFCYDRREAERHGCRCGECFLVLDHRAFVLFDSGSTHSFVSVLFGLEHAKLRLEPLGFELSIATPSGVNMLARDKIRDGRIEIS
+GG + G RVF R+EAER G +L H AFVLFDSGS+HSF+S +F + H +L +EPLG LS++TPSG +L+++KI+ R+EI+
Subjt: TDYGGSNVQQVG---RVFCYDRREAERHGCRCGECFLVLDHRAFVLFDSGSTHSFVSVLFGLEHAKLRLEPLGFELSIATPSGVNMLARDKIRDGRIEIS
Query: GELLVATLIVPPISGFDVILGMEWLVANHALIDRHRKEVVFRPPSAVDFKFRG
+L TL+V + FDVILGM+WL ANHA ID KEVVF PPS FKFRG
Subjt: GELLVATLIVPPISGFDVILGMEWLVANHALIDRHRKEVVFRPPSAVDFKFRG
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| A0A5D3CQB5 Reverse transcriptase | 5.0e-35 | 33.68 | Show/hide |
Query: MVCPDIQRPRCAAHVLGG-------TNEMVVGVHLERETTGSPPATWEFFKAEFKVKFISDEAQEKMVELFRNSKRVTIPLRNMRGSSRRLSRLAT----
M CP+ Q+ +CA L T E ++G + + TWE FK F KF S + ++ F N ++ + + LSR A
Subjt: MVCPDIQRPRCAAHVLGG-------TNEMVVGVHLERETTGSPPATWEFFKAEFKVKFISDEAQEKMVELFRNSKRVTIPLRNMRGSSRRLSRLAT----
Query: -------------------IYNGKYPAERVVAALFGI-LSQPE-----MGAKRGSLIFE--AAAAAQGRFEKRSAESSTRFHRQ-----TARRTRERFPH
I PA A + LS PE A RGS + + +R+ S F R A RT P
Subjt: -------------------IYNGKYPAERVVAALFGI-LSQPE-----MGAKRGSLIFE--AAAAAQGRFEKRSAESSTRFHRQ-----TARRTRERFPH
Query: VLLVGK-STLELVDRPRLCFRCGREG------TWPAFVITDYGGSNVQQVGRVFCYDRREAERHGCRCGECFLVLDHRAFVLFDSGSTHSFVSVLFGLEH
G+ + +CFRC + G F T S QQ GRVF R+EAER G +L H AFVLFDSGS+HSF+S +F ++H
Subjt: VLLVGK-STLELVDRPRLCFRCGREG------TWPAFVITDYGGSNVQQVGRVFCYDRREAERHGCRCGECFLVLDHRAFVLFDSGSTHSFVSVLFGLEH
Query: AKLRLEPLGFELSIATPSGVNMLARDKIRDGRIEISGELLVATLIVPPISGFDVILGMEWLVANHALIDRHRKEVVFRPPSAVDFKFRG
L +EPLG LS++TPSG +L++++I+ R+EI+ +L TL+V + FDVILGM+WL ANHA ID + KEVVF PPS FKFRG
Subjt: AKLRLEPLGFELSIATPSGVNMLARDKIRDGRIEISGELLVATLIVPPISGFDVILGMEWLVANHALIDRHRKEVVFRPPSAVDFKFRG
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