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Sed0016720 (gene) of Chayote v1 genome

Gene IDSed0016720
OrganismSechium edule (Chayote v1)
DescriptionSAUR-like auxin-responsive protein family
Genome locationLG03:11045677..11046202
RNA-Seq ExpressionSed0016720
SyntenySed0016720
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008444786.1 PREDICTED: auxin-induced protein 15A-like [Cucumis melo]1.4e-3473.45Show/hide
Query:  MAVTGKLTQAAVVRQIIKRCSSLR---KNKNKNDDGGGG----GGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMG
        MAV+ KLT  AVV+QI KRCSSLR   KNKN N++        GGGG   PVDVPKGHFVVYVSENRSRYIVPLTFL RPEFQ LLQLAEEEFGF+H MG
Subjt:  MAVTGKLTQAAVVRQIIKRCSSLR---KNKNKNDDGGGG----GGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMG

Query:  LTIPCEEHLFRSM
        LTIPCEE +FRS+
Subjt:  LTIPCEEHLFRSM

XP_022951771.1 auxin-responsive protein SAUR50-like [Cucurbita moschata]9.3e-3472.48Show/hide
Query:  MAVTGKLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEE
        MAVT +L+QAAVV+QI+KRCSSLR NK  +  GG GGG   + PVDVPKGHFVVYV ENRSRYIVP+TFL+ PEFQ LLQLAEEEFGF+H MGLTIPC+E
Subjt:  MAVTGKLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEE

Query:  HLFRSMLLS
         +F+S+L S
Subjt:  HLFRSMLLS

XP_023002557.1 auxin-responsive protein SAUR50-like [Cucurbita maxima]1.7e-3573.83Show/hide
Query:  MAVTGKLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEE
        MAV+ +L+QAAVV+QI+KRCSSLR NK  +  GG GGGGG + PVDVPKGHFVVYV ENRSRYIVP+TFL+ PEFQ LLQLAEEEFGF+H MGLTIPC+E
Subjt:  MAVTGKLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEE

Query:  HLFRSML
         +F+S+L
Subjt:  HLFRSML

XP_023538452.1 auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo]7.1e-3472.48Show/hide
Query:  MAVTGKLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEE
        MAVT +L+QAAVV+QI+KRCSSLR NK  +  GG GGG   + PVDVPKGHFVVYV ENRSRYIVP+TFL+ PEFQ LLQLAEEEFGF+H MGLTIPC+E
Subjt:  MAVTGKLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEE

Query:  HLFRSMLLS
         +F+S+L S
Subjt:  HLFRSMLLS

XP_038886317.1 auxin-responsive protein SAUR50-like [Benincasa hispida]2.9e-3578.3Show/hide
Query:  MAVTGKLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEE
        MAV+ KLTQ AVV+QI KRCSSLR NKNKN     GGG     PVDVPKGHFVVYVSENRSRYIVPLTFL RPEFQ LLQLAEEEFGFNH MGLTIPCEE
Subjt:  MAVTGKLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEE

Query:  HLFRSM
         +F+S+
Subjt:  HLFRSM

TrEMBL top hitse value%identityAlignment
A0A0A0LRM7 Uncharacterized protein1.0e-3373.64Show/hide
Query:  MAVTGKLTQAAVVRQIIKRCSSLR---KNKNKNDDGGG-GGGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTI
        MAV+ KLT  AVV+QI KRCSSLR   KNKN N++      GGG   PVDVPKGHFVVYVSENRSRYIVPLTFL RPEFQ LLQLAEEEFGF+H MGLTI
Subjt:  MAVTGKLTQAAVVRQIIKRCSSLR---KNKNKNDDGGG-GGGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTI

Query:  PCEEHLFRSM
        PCEE +F+S+
Subjt:  PCEEHLFRSM

A0A1S3BB62 auxin-induced protein 15A-like6.9e-3573.45Show/hide
Query:  MAVTGKLTQAAVVRQIIKRCSSLR---KNKNKNDDGGGG----GGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMG
        MAV+ KLT  AVV+QI KRCSSLR   KNKN N++        GGGG   PVDVPKGHFVVYVSENRSRYIVPLTFL RPEFQ LLQLAEEEFGF+H MG
Subjt:  MAVTGKLTQAAVVRQIIKRCSSLR---KNKNKNDDGGGG----GGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMG

Query:  LTIPCEEHLFRSM
        LTIPCEE +FRS+
Subjt:  LTIPCEEHLFRSM

A0A5A7VD05 Auxin-induced protein 15A-like6.9e-3573.45Show/hide
Query:  MAVTGKLTQAAVVRQIIKRCSSLR---KNKNKNDDGGGG----GGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMG
        MAV+ KLT  AVV+QI KRCSSLR   KNKN N++        GGGG   PVDVPKGHFVVYVSENRSRYIVPLTFL RPEFQ LLQLAEEEFGF+H MG
Subjt:  MAVTGKLTQAAVVRQIIKRCSSLR---KNKNKNDDGGGG----GGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMG

Query:  LTIPCEEHLFRSM
        LTIPCEE +FRS+
Subjt:  LTIPCEEHLFRSM

A0A6J1GIF7 auxin-responsive protein SAUR50-like4.5e-3472.48Show/hide
Query:  MAVTGKLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEE
        MAVT +L+QAAVV+QI+KRCSSLR NK  +  GG GGG   + PVDVPKGHFVVYV ENRSRYIVP+TFL+ PEFQ LLQLAEEEFGF+H MGLTIPC+E
Subjt:  MAVTGKLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEE

Query:  HLFRSMLLS
         +F+S+L S
Subjt:  HLFRSMLLS

A0A6J1KJU9 auxin-responsive protein SAUR50-like8.2e-3673.83Show/hide
Query:  MAVTGKLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEE
        MAV+ +L+QAAVV+QI+KRCSSLR NK  +  GG GGGGG + PVDVPKGHFVVYV ENRSRYIVP+TFL+ PEFQ LLQLAEEEFGF+H MGLTIPC+E
Subjt:  MAVTGKLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEE

Query:  HLFRSML
         +F+S+L
Subjt:  HLFRSML

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR504.2e-2961.32Show/hide
Query:  MAVTGKLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEE
        M  T KLTQ A+++QI+KRCSSL K         GGG      P+DVPKGHF VYV ENRSRYIVP++FL  PEFQ+LLQ AEEEFGF+H MGLTIPC+E
Subjt:  MAVTGKLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEE

Query:  HLFRSM
         +F+++
Subjt:  HLFRSM

P0DKL1 Auxin-responsive protein SAUR509.0e-2458Show/hide
Query:  KLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEEHLFRS
        K TQA  +++IIK+CSS  KN   NDD G         P DVPKGHFVVYV E R+RYIVP++ L  P FQ LLQ +EEEFGFNH MG+ IPC+E  F S
Subjt:  KLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEEHLFRS

P32295 Indole-3-acetic acid-induced protein ARG71.4e-1355.74Show/hide
Query:  VDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGM-GLTIPCEEHLFR
        +D PKG+  VYV EN  R+++P++ L +P FQ LL  AEEEFG++H M GLTIPC E LF+
Subjt:  VDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGM-GLTIPCEEHLFR

P33082 Auxin-induced protein X151.9e-1352.46Show/hide
Query:  VDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGM-GLTIPCEEHLFR
        VD PKG+  VYV E   R+++P++++ +P FQ LL  AEEEFG++H M GLTIPC E +F+
Subjt:  VDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGM-GLTIPCEEHLFR

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 103.9e-2763Show/hide
Query:  TQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEEHLFRSML
        +QAA ++QI+KRCSSLRK KN N   G       + P DVPKGHF VYV  NRSRYIVP+++L   EFQTLL+LAEEEFGF+H MGLTIPC+E  FRS++
Subjt:  TQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEEHLFRSML

Arabidopsis top hitse value%identityAlignment
AT1G19830.1 SAUR-like auxin-responsive protein family3.3e-2959.62Show/hide
Query:  KLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEEHLFRS
        KLTQ  +++QI+KRCSSL K K  ++        G + P+DVPKGHFVVYV  NR RY++P++FL RPEFQ LLQ AEEEFGF+H MGLTIPCEE  F+S
Subjt:  KLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEEHLFRS

Query:  MLLS
        ++ S
Subjt:  MLLS

AT1G75580.1 SAUR-like auxin-responsive protein family1.3e-3063.21Show/hide
Query:  MAVTGKLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEE
        M    KLTQ A+++QI+KRCSSL K K  N  G    G    +P++VPKGHFVVYV ENR RY+VP++FL RPEFQ LLQ AEEEFGF+H MGLTIPCEE
Subjt:  MAVTGKLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEE

Query:  HLFRSM
         +FRS+
Subjt:  HLFRSM

AT2G18010.1 SAUR-like auxin-responsive protein family2.8e-2863Show/hide
Query:  TQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEEHLFRSML
        +QAA ++QI+KRCSSLRK KN N   G       + P DVPKGHF VYV  NRSRYIVP+++L   EFQTLL+LAEEEFGF+H MGLTIPC+E  FRS++
Subjt:  TQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEEHLFRSML

AT2G21220.1 SAUR-like auxin-responsive protein family7.1e-3263.11Show/hide
Query:  TGKLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEEHLF
        + KLTQ A+++QI+KRCSSL KN+  ++DG          PVDVPKGHF VYV E RSRYIVP++FL  P+F++LLQ AEEEFGFNH MGLTIPCEE +F
Subjt:  TGKLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEEHLF

Query:  RSM
        RS+
Subjt:  RSM

AT4G34760.1 SAUR-like auxin-responsive protein family3.0e-3061.32Show/hide
Query:  MAVTGKLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEE
        M  T KLTQ A+++QI+KRCSSL K         GGG      P+DVPKGHF VYV ENRSRYIVP++FL  PEFQ+LLQ AEEEFGF+H MGLTIPC+E
Subjt:  MAVTGKLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEE

Query:  HLFRSM
         +F+++
Subjt:  HLFRSM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTGACCGGAAAGCTAACGCAGGCGGCCGTGGTCCGGCAAATCATAAAGCGGTGTTCAAGTTTGAGAAAAAACAAAAACAAAAACGACGACGGTGGCGGTGGCGG
TGGCGGTGGCAGAAATACTCCGGTCGATGTGCCGAAGGGGCATTTCGTGGTGTACGTCAGTGAAAACAGAAGCAGGTACATTGTGCCGCTCACGTTTCTTGCAAGGCCAG
AGTTTCAAACTCTTCTCCAATTGGCCGAGGAAGAGTTCGGGTTTAATCATGGAATGGGCCTCACTATTCCATGCGAAGAGCACCTCTTTCGGTCTATGCTACTCTCGTGA
mRNA sequenceShow/hide mRNA sequence
TTTTCATCTCTCTCAATTCACAACTCCAATCCAATGGCAGTGACCGGAAAGCTAACGCAGGCGGCCGTGGTCCGGCAAATCATAAAGCGGTGTTCAAGTTTGAGAAAAAA
CAAAAACAAAAACGACGACGGTGGCGGTGGCGGTGGCGGTGGCAGAAATACTCCGGTCGATGTGCCGAAGGGGCATTTCGTGGTGTACGTCAGTGAAAACAGAAGCAGGT
ACATTGTGCCGCTCACGTTTCTTGCAAGGCCAGAGTTTCAAACTCTTCTCCAATTGGCCGAGGAAGAGTTCGGGTTTAATCATGGAATGGGCCTCACTATTCCATGCGAA
GAGCACCTCTTTCGGTCTATGCTACTCTCGTGAACCCAACCGAATCCAACCGAGTTGTTTTATCTAATCGGTGATTTAAGGTTTAGGGTTTAGGGTTTAGTGTTTTCGAT
CATGAGAGCTGTTGTCGGCTATTCATGTGTTCGAGAAATTACTTGATGAGGAGATTGTAACAATGTGACTGAGTGAGTAATTTTAG
Protein sequenceShow/hide protein sequence
MAVTGKLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEEHLFRSMLLS