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Sed0016737 (gene) of Chayote v1 genome

Gene IDSed0016737
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein 230
Genome locationLG11:34342371..34346616
RNA-Seq ExpressionSed0016737
SyntenySed0016737
Gene Ontology termsGO:0005768 - endosome (cellular component)
GO:0005776 - autophagosome (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008590 - Transmembrane protein 230/134
IPR044234 - Transmembrane protein 230


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459349.1 PREDICTED: transmembrane protein 230 [Cucumis melo]2.7e-5593.1Show/hide
Query:  MASRRNVRYSSLATDDNDLDHDGNRYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMEGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRN+RYSSLA+DDND+D +G+R+DPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHM GEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLATDDNDLDHDGNRYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMEGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

XP_022939930.1 transmembrane protein 230-like [Cucurbita moschata]2.7e-5593.97Show/hide
Query:  MASRRNVRYSSLATDDNDLDHDGNRYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMEGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRNVRYSSL+TDDNDLD DGN++DPRFYYTPKAFDKIPWKSIALAIFLL LGS LLFLSYFVLTGHM GEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLATDDNDLDHDGNRYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMEGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

XP_022961740.1 transmembrane protein 230-like [Cucurbita moschata]2.7e-5593.1Show/hide
Query:  MASRRNVRYSSLATDDNDLDHDGNRYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMEGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRNVRYSSLA DDNDLD++G++YDPRFYYTPKAFDKIPWKSIALA+FLLLLGS LLFLSYFVLTGHM GEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLATDDNDLDHDGNRYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMEGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

XP_023521905.1 transmembrane protein 230-like [Cucurbita pepo subsp. pepo]9.2e-5693.97Show/hide
Query:  MASRRNVRYSSLATDDNDLDHDGNRYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMEGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRNVRYSSLA DDNDLD++G++YDPRFYYTPKAFDKIPWKSIALA+FLLLLGSLLLFLSYFVLTGHM GEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLATDDNDLDHDGNRYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMEGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

XP_038889462.1 transmembrane protein 230 [Benincasa hispida]2.9e-5493.1Show/hide
Query:  MASRRNVRYSSLATDDNDLDHDGNRYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMEGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRNVRY SLATDDNDLD +G+ YDPRFYYTPKAFDKIPWKSIALAIFLL+LG LLLFLSYFVLTGHM GEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLATDDNDLDHDGNRYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMEGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

TrEMBL top hitse value%identityAlignment
A0A1S3C9X7 Transmembrane protein 2301.3e-5593.1Show/hide
Query:  MASRRNVRYSSLATDDNDLDHDGNRYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMEGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRN+RYSSLA+DDND+D +G+R+DPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHM GEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLATDDNDLDHDGNRYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMEGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

A0A6J1FP54 Transmembrane protein 2301.3e-5593.97Show/hide
Query:  MASRRNVRYSSLATDDNDLDHDGNRYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMEGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRNVRYSSL+TDDNDLD DGN++DPRFYYTPKAFDKIPWKSIALAIFLL LGS LLFLSYFVLTGHM GEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLATDDNDLDHDGNRYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMEGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

A0A6J1HAY7 Transmembrane protein 2301.3e-5593.1Show/hide
Query:  MASRRNVRYSSLATDDNDLDHDGNRYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMEGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRNVRYSSLA DDNDLD++G++YDPRFYYTPKAFDKIPWKSIALA+FLLLLGS LLFLSYFVLTGHM GEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLATDDNDLDHDGNRYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMEGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

A0A6J1JQW3 Transmembrane protein 2301.4e-5492.24Show/hide
Query:  MASRRNVRYSSLATDDNDLDHDGNRYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMEGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRR+VRYSSLA DDNDLD++G++YDPRFYYTPKAFDKIPWKSIALA+FLLLLGSLLLFLSYFVLTGHM GEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLATDDNDLDHDGNRYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMEGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGY FASIPDY
Subjt:  AWRGANGYRFASIPDY

A0A6J1K312 Transmembrane protein 2301.3e-5593.97Show/hide
Query:  MASRRNVRYSSLATDDNDLDHDGNRYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMEGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRNVRYSSL+TDDNDLD DGN++DPRFYYTPKAFDKIPWKSIALAIFLL LGS LLFLSYFVLTGHM GEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLATDDNDLDHDGNRYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMEGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

SwissProt top hitse value%identityAlignment
Q5BJP5 Transmembrane protein 2301.2e-1341.07Show/hide
Query:  VRYSSL-ATDDNDLDHDGNRYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHM-EGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRG
        V+YS L +TDD  +D    +  P          KIP+K+IALA  L L+G+ L+ +   +L+G++ +G   +A  +L +G L FLPGFY  RIAYYA +G
Subjt:  VRYSSL-ATDDNDLDHDGNRYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHM-EGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRG

Query:  ANGYRFASIPDY
          GY +  IPD+
Subjt:  ANGYRFASIPDY

Q5R8X3 Transmembrane protein 2309.0e-1441.44Show/hide
Query:  VRYSSLATDDNDLDHDGNRYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHM-EGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGA
        V+YS L++ D+         D +F  TP    KIP+K+IALA  L L+G+ L+ +   +L+G++ +G   +A  +L +G L FLPGFY  RIAYYA +G 
Subjt:  VRYSSLATDDNDLDHDGNRYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHM-EGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGA

Query:  NGYRFASIPDY
         GY +  IPD+
Subjt:  NGYRFASIPDY

Q5ZLH4 Transmembrane protein 2303.1e-1441.07Show/hide
Query:  VRYSSLA-TDDNDLDHDGNRYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHM-EGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRG
        V+YS LA TDD  +D    +  P          KIP+K+IALA+ L ++G+ L+ +   +L G++ +G   +A  +L +G L FLPGFY  RIAYYA +G
Subjt:  VRYSSLA-TDDNDLDHDGNRYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHM-EGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRG

Query:  ANGYRFASIPDY
          GY +  IPD+
Subjt:  ANGYRFASIPDY

Q8CIB6 Transmembrane protein 2305.3e-1441.96Show/hide
Query:  VRYSSLA-TDDNDLDHDGNRYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHM-EGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRG
        V+YS LA TDD  +D    +  P          KIP+K+IALA  L L+G+ L+ +   +L+G++ +G   +A  +L +G L FLPGFY  RIAYYA +G
Subjt:  VRYSSLA-TDDNDLDHDGNRYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHM-EGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRG

Query:  ANGYRFASIPDY
          GY +  IPD+
Subjt:  ANGYRFASIPDY

Q96A57 Transmembrane protein 2305.3e-1441.44Show/hide
Query:  VRYSSLATDDNDLDHDGNRYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHM-EGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGA
        V+YS L++ D+         D +F  TP    KIP+K+IALA  L L+G+ L+ +   +L+G++ +G   +A  +L +G L FLPGFY  RIAYYA +G 
Subjt:  VRYSSLATDDNDLDHDGNRYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHM-EGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGA

Query:  NGYRFASIPDY
         GY +  IPD+
Subjt:  NGYRFASIPDY

Arabidopsis top hitse value%identityAlignment
AT2G19350.1 Eukaryotic protein of unknown function (DUF872)6.6e-1243.24Show/hide
Query:  PWKSIALAIFLLLLGSLLLFLSYFVLTGHMEGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIP
        P K I+LA+ LL+ G+L + L +F+    + G++      + LG L F+PGFY TRIAYYA++G  G+ F++IP
Subjt:  PWKSIALAIFLLLLGSLLLFLSYFVLTGHMEGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIP

AT3G29170.1 Eukaryotic protein of unknown function (DUF872)3.0e-4166.94Show/hide
Query:  MASRRNVRYSSLATDDNDLDHD---GNR--YDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMEGEKSQAYGLLALGFLTFLPGFYET
        MASRR+VRY+ L  D++D  +    G R  +DPRF Y+PKAFD++PWKSIALA+FLL LG LLL LS+F+  GHMEG+ SQ Y LL LG LTFLPGFYET
Subjt:  MASRRNVRYSSLATDDNDLDHD---GNR--YDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMEGEKSQAYGLLALGFLTFLPGFYET

Query:  RIAYYAWRGANGYRFASIPDY
        RIAYY+WRGA GYRFA+IP Y
Subjt:  RIAYYAWRGANGYRFASIPDY

AT4G29850.1 Eukaryotic protein of unknown function (DUF872)1.1e-1143.24Show/hide
Query:  PWKSIALAIFLLLLGSLLLFLSYFVLTGHMEGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIP
        P K IALA+ LL+ G+L +   +F+    + G++      + LG L F+PGFY TRIAYYA++G  G+ F++IP
Subjt:  PWKSIALAIFLLLLGSLLLFLSYFVLTGHMEGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCTAGACGAAATGTTCGTTATAGCTCCCTTGCCACTGATGATAACGATCTTGATCATGATGGAAATCGATATGACCCTCGATTTTACTATACGCCGAAAGCTTT
TGACAAGATTCCATGGAAATCCATTGCTCTGGCTATTTTCTTGTTACTACTTGGATCATTGCTTCTCTTTCTTTCGTACTTCGTGTTAACCGGTCACATGGAAGGAGAGA
AATCGCAAGCTTATGGTCTTTTGGCATTGGGGTTTCTTACCTTCCTCCCAGGCTTTTACGAGACTAGGATTGCGTATTATGCATGGAGGGGAGCTAATGGATATCGCTTT
GCTTCCATTCCTGATTACTAG
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAAAGCCAGTCACCGTCGAAAACGACGGACTTTCTCAACAGCCGCCGGTGAGATTTGTAAGCTTTTGATTTCAGCAGAACTTTCAAAATTTCAAGATCGATTTC
GCATCGGGTCCTTTCGCCTATTCTCTGAACTGTGGTTTGGTTTAATTGAAATTTGAAGACTGCATTCTTGATACTCGCTGCTGTTATGGCATCTAGACGAAATGTTCGTT
ATAGCTCCCTTGCCACTGATGATAACGATCTTGATCATGATGGAAATCGATATGACCCTCGATTTTACTATACGCCGAAAGCTTTTGACAAGATTCCATGGAAATCCATT
GCTCTGGCTATTTTCTTGTTACTACTTGGATCATTGCTTCTCTTTCTTTCGTACTTCGTGTTAACCGGTCACATGGAAGGAGAGAAATCGCAAGCTTATGGTCTTTTGGC
ATTGGGGTTTCTTACCTTCCTCCCAGGCTTTTACGAGACTAGGATTGCGTATTATGCATGGAGGGGAGCTAATGGATATCGCTTTGCTTCCATTCCTGATTACTAGGTGT
TCCTATCTCGATGGTGAAGCTGTTTAGTGCTGGACGGCGAAGCCAAAGCAAATACTTGAAGGGGAAAAAAAAAAAACAAATCTGTGCGAATTAGCTCTATTTGCACCAAT
TTGATTTTATAATAAATCAAATTATGTATATAAGAAGAGAGAGTATATTGTATATGCCATGTTTGGTATGGGTATATTCTTTGCTTACACAAGAAGGGGACAATTACTCA
ACGCAAGTGTGTGAACATAGGC
Protein sequenceShow/hide protein sequence
MASRRNVRYSSLATDDNDLDHDGNRYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMEGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRF
ASIPDY