CuGenDBv2

Gene ID	Sed0016741
Organism	Sechium edule (Chayote v1)
Description	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages;
Genome location	LG04:13570379..13574220
RNA-Seq Expression	Sed0016741
Synteny	Sed0016741
Gene Ontology terms	GO:0048767 - root hair elongation (biological process) GO:0071816 - tail-anchored membrane protein insertion into ER membrane (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0043529 - GET complex (cellular component) GO:0043621 - protein self-association (molecular function)
InterPro domains	IPR028945 - Get1 family

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6596276.1 hypothetical protein SDJN03_09456, partial [Cucurbita argyrosperma subsp. sororia]

2.9e-77

88.57

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Query:  MEAEGIVEHRRSIVAPSIFLIVVAFQFLARWLEQLKKKGSNNQVEMELRKSIKQLLREASALSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEMKTSY
        MEAE IVEHR SIVAPSIF IV+AFQFLA WL+ LKK+GSNNQVEMELRKSIKQLLREAS LSQPSTFAQAAKLRR AAAKEKELANYQESR+K++K+SY
Subjt:  MEAEGIVEHRRSIVAPSIFLIVVAFQFLARWLEQLKKKGSNNQVEMELRKSIKQLLREASALSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEMKTSY

Query:  DLFSRVLLMSKVLIYIVLVCWFWRASVASVPPHLVQPFGRFLSWRAGSTVNDYVKVGIIPWLILSTRVSKFVCRV
         L+SRVLL+SKVLIYIVLVCWFWRASVA+VP HLVQPFGRFLSWRAG TVNDYVKVGIIPWLILSTRVSKFVCRV
Subjt:  DLFSRVLLMSKVLIYIVLVCWFWRASVASVPPHLVQPFGRFLSWRAGSTVNDYVKVGIIPWLILSTRVSKFVCRV

XP_008448478.1 PREDICTED: uncharacterized protein LOC103490650 [Cucumis melo]

4.2e-76

86.36

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Query:  MEAEGIVEHRRSIVAPSIFLIVVAFQFLARWLEQLKKKGSNNQVEMELRKSIKQLLREASALSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEMKTSY
        MEAEGIVEH  SI AP IF IV+ FQFLARWLE LKK GSN+QVE+ELRKSIKQLLREAS LSQPSTFAQAAKLRRLAAAKEKELANYQESRNKE+KTSY
Subjt:  MEAEGIVEHRRSIVAPSIFLIVVAFQFLARWLEQLKKKGSNNQVEMELRKSIKQLLREASALSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEMKTSY

Query:  DLFSRVLLMSKVLIYIVLVCWFWRASVASVPPHLVQPFGRFLSWRAGSTVNDYVKVGIIPWLILSTRVSKFVCRVV
         L+S+VLL+SKV+IYIVLVCWFWRASVA+VP HLVQPFG+FLSW+AG TVNDYVKVGIIPWLILSTRVSKFVC+VV
Subjt:  DLFSRVLLMSKVLIYIVLVCWFWRASVASVPPHLVQPFGRFLSWRAGSTVNDYVKVGIIPWLILSTRVSKFVCRVV

XP_022945757.1 uncharacterized protein LOC111449636 [Cucurbita moschata]

9.9e-78

89.14

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Query:  MEAEGIVEHRRSIVAPSIFLIVVAFQFLARWLEQLKKKGSNNQVEMELRKSIKQLLREASALSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEMKTSY
        MEAE IVEHR SIVAPSIFLIV+AFQFLA WL+ LKK+GSNNQVEMELRKSIKQLLREAS LSQPSTFAQAAKLRR AAAKEKELANYQESR+K++K+SY
Subjt:  MEAEGIVEHRRSIVAPSIFLIVVAFQFLARWLEQLKKKGSNNQVEMELRKSIKQLLREASALSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEMKTSY

Query:  DLFSRVLLMSKVLIYIVLVCWFWRASVASVPPHLVQPFGRFLSWRAGSTVNDYVKVGIIPWLILSTRVSKFVCRV
         L+SRVLL+SKVLIYIVLVCWFWRASVA+VP HLVQPFGRFLSWRAG TVNDYVKVGIIPWLILSTRVSKFVCRV
Subjt:  DLFSRVLLMSKVLIYIVLVCWFWRASVASVPPHLVQPFGRFLSWRAGSTVNDYVKVGIIPWLILSTRVSKFVCRV

XP_022971588.1 uncharacterized protein LOC111470261 [Cucurbita maxima]

9.9e-78

89.14

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Query:  MEAEGIVEHRRSIVAPSIFLIVVAFQFLARWLEQLKKKGSNNQVEMELRKSIKQLLREASALSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEMKTSY
        MEAE IVEHR SIVAPSIFLIV+AFQFLA WL+ LKK+GSNNQVEMELRKSIKQLLREAS LSQPSTFAQAAKLRRLAAAKEKELANYQESR+K++K+SY
Subjt:  MEAEGIVEHRRSIVAPSIFLIVVAFQFLARWLEQLKKKGSNNQVEMELRKSIKQLLREASALSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEMKTSY

Query:  DLFSRVLLMSKVLIYIVLVCWFWRASVASVPPHLVQPFGRFLSWRAGSTVNDYVKVGIIPWLILSTRVSKFVCRV
         L+SRVLL+SKVLIYIVLVCWFWRASVA+VP HLVQPFGRFLSWRAG  VNDYVKVGIIPWLILSTRVSKFVCRV
Subjt:  DLFSRVLLMSKVLIYIVLVCWFWRASVASVPPHLVQPFGRFLSWRAGSTVNDYVKVGIIPWLILSTRVSKFVCRV

XP_023539852.1 uncharacterized protein LOC111800404 [Cucurbita pepo subsp. pepo]

3.4e-78

89.71

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Query:  MEAEGIVEHRRSIVAPSIFLIVVAFQFLARWLEQLKKKGSNNQVEMELRKSIKQLLREASALSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEMKTSY
        MEAE IVEHR SIVAPSIFLIV+AFQFLA WL+ LKK+GSNNQVEMELRKSIKQLLREAS LSQPSTFAQAAKLRR AAAKEKELANYQESR+KE+K+SY
Subjt:  MEAEGIVEHRRSIVAPSIFLIVVAFQFLARWLEQLKKKGSNNQVEMELRKSIKQLLREASALSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEMKTSY

Query:  DLFSRVLLMSKVLIYIVLVCWFWRASVASVPPHLVQPFGRFLSWRAGSTVNDYVKVGIIPWLILSTRVSKFVCRV
         L+SRVLL+SKVLIYIVLVCWFWRASVA+VP HLVQPFGRFLSWRAG TVNDYVKVGIIPWLILSTRVSKFVCRV
Subjt:  DLFSRVLLMSKVLIYIVLVCWFWRASVASVPPHLVQPFGRFLSWRAGSTVNDYVKVGIIPWLILSTRVSKFVCRV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L4T9 Uncharacterized protein

1.0e-75

85.8

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Query:  MEAEGIVEHRRSIVAPSIFLIVVAFQFLARWLEQLKKKGSNNQVEMELRKSIKQLLREASALSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEMKTSY
        ME EGIVEHR SI AP IF IV+ FQFLA+WLE LKK+GSN+QVEMELRKSIKQLL+EAS LSQPSTFAQAAKLRRLAAAKEKELANYQESRNKE+KTSY
Subjt:  MEAEGIVEHRRSIVAPSIFLIVVAFQFLARWLEQLKKKGSNNQVEMELRKSIKQLLREASALSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEMKTSY

Query:  DLFSRVLLMSKVLIYIVLVCWFWRASVASVPPHLVQPFGRFLSWRAGSTVNDYVKVGIIPWLILSTRVSKFVCRVV
         L+S+VLL+SKV+I+IVLVCWFWRASVA+VP HLVQPFG+FLSWRAG TVNDYVKVGIIPWLILSTRVSKFV RVV
Subjt:  DLFSRVLLMSKVLIYIVLVCWFWRASVASVPPHLVQPFGRFLSWRAGSTVNDYVKVGIIPWLILSTRVSKFVCRVV

A0A1S3BKE1 uncharacterized protein LOC103490650

2.0e-76

86.36

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Query:  MEAEGIVEHRRSIVAPSIFLIVVAFQFLARWLEQLKKKGSNNQVEMELRKSIKQLLREASALSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEMKTSY
        MEAEGIVEH  SI AP IF IV+ FQFLARWLE LKK GSN+QVE+ELRKSIKQLLREAS LSQPSTFAQAAKLRRLAAAKEKELANYQESRNKE+KTSY
Subjt:  MEAEGIVEHRRSIVAPSIFLIVVAFQFLARWLEQLKKKGSNNQVEMELRKSIKQLLREASALSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEMKTSY

Query:  DLFSRVLLMSKVLIYIVLVCWFWRASVASVPPHLVQPFGRFLSWRAGSTVNDYVKVGIIPWLILSTRVSKFVCRVV
         L+S+VLL+SKV+IYIVLVCWFWRASVA+VP HLVQPFG+FLSW+AG TVNDYVKVGIIPWLILSTRVSKFVC+VV
Subjt:  DLFSRVLLMSKVLIYIVLVCWFWRASVASVPPHLVQPFGRFLSWRAGSTVNDYVKVGIIPWLILSTRVSKFVCRVV

A0A6J1G1T6 uncharacterized protein LOC111449636

4.8e-78

89.14

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Query:  MEAEGIVEHRRSIVAPSIFLIVVAFQFLARWLEQLKKKGSNNQVEMELRKSIKQLLREASALSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEMKTSY
        MEAE IVEHR SIVAPSIFLIV+AFQFLA WL+ LKK+GSNNQVEMELRKSIKQLLREAS LSQPSTFAQAAKLRR AAAKEKELANYQESR+K++K+SY
Subjt:  MEAEGIVEHRRSIVAPSIFLIVVAFQFLARWLEQLKKKGSNNQVEMELRKSIKQLLREASALSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEMKTSY

Query:  DLFSRVLLMSKVLIYIVLVCWFWRASVASVPPHLVQPFGRFLSWRAGSTVNDYVKVGIIPWLILSTRVSKFVCRV
         L+SRVLL+SKVLIYIVLVCWFWRASVA+VP HLVQPFGRFLSWRAG TVNDYVKVGIIPWLILSTRVSKFVCRV
Subjt:  DLFSRVLLMSKVLIYIVLVCWFWRASVASVPPHLVQPFGRFLSWRAGSTVNDYVKVGIIPWLILSTRVSKFVCRV

A0A6J1I7A9 uncharacterized protein LOC111470261

4.8e-78

89.14

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Query:  MEAEGIVEHRRSIVAPSIFLIVVAFQFLARWLEQLKKKGSNNQVEMELRKSIKQLLREASALSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEMKTSY
        MEAE IVEHR SIVAPSIFLIV+AFQFLA WL+ LKK+GSNNQVEMELRKSIKQLLREAS LSQPSTFAQAAKLRRLAAAKEKELANYQESR+K++K+SY
Subjt:  MEAEGIVEHRRSIVAPSIFLIVVAFQFLARWLEQLKKKGSNNQVEMELRKSIKQLLREASALSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEMKTSY

Query:  DLFSRVLLMSKVLIYIVLVCWFWRASVASVPPHLVQPFGRFLSWRAGSTVNDYVKVGIIPWLILSTRVSKFVCRV
         L+SRVLL+SKVLIYIVLVCWFWRASVA+VP HLVQPFGRFLSWRAG  VNDYVKVGIIPWLILSTRVSKFVCRV
Subjt:  DLFSRVLLMSKVLIYIVLVCWFWRASVASVPPHLVQPFGRFLSWRAGSTVNDYVKVGIIPWLILSTRVSKFVCRV

A0A6J1L884 uncharacterized protein LOC111500212

1.4e-74

86.29

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Query:  EAEGIVEHRRSIVAPSIFLIVVAFQFLARWLEQLKKKGSNNQVEMELRKSIKQLLREASALSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEMKTSYD
        EAEGIVEHR SI AP IFLIV+AFQFLARWLE LKK GSN+QVEMELRKSIKQLLREAS LSQPSTFAQAAKLRRLAAAKEKELANYQESRNKE+KTSY 
Subjt:  EAEGIVEHRRSIVAPSIFLIVVAFQFLARWLEQLKKKGSNNQVEMELRKSIKQLLREASALSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEMKTSYD

Query:  LFSRVLLMSKVLIYIVLVCWFWRASVASVPPHLVQPFGRFLSWRAGSTVNDYVKVGIIPWLILSTRVSKFVCRVV
        L+SRVLL+SKV +YI LV WFWR SVA+VP HLVQPFGR LSW+AG  VNDYVKVGIIPWLILSTRVSKFVC+VV
Subjt:  LFSRVLLMSKVLIYIVLVCWFWRASVASVPPHLVQPFGRFLSWRAGSTVNDYVKVGIIPWLILSTRVSKFVCRVV

SwissProt top hits

e value

%identity

Alignment

Q1H5D2 Protein GET1

6.7e-53

61.93

Show/hide

Query:  MEAEGIVEHRRSIVAPSIFLIVVAFQFLARWLEQLKKKGSNNQVEMELRKSIKQLLREASALSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEMKTSY
        ME E ++E R  + AP  F++VV FQ L++WL+QLKKKGS N  E ELR  IKQLLREASALSQP+TFAQAAKLRR AA KEKELA Y E  +KE+K SY
Subjt:  MEAEGIVEHRRSIVAPSIFLIVVAFQFLARWLEQLKKKGSNNQVEMELRKSIKQLLREASALSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEMKTSY

Query:  DLFSRVLLMSKVLIYIVLVCWFWRASVASVPPHLVQPFGRFLSWRAGSTVNDYVKVGIIPWLILSTRVSKFVCRVV
        D++ + LL SKV+IY++LV  FWR  +A +   LVQPFG  LSW  G  +  +V VGIIPWLILS RVSK+VCR V
Subjt:  DLFSRVLLMSKVLIYIVLVCWFWRASVASVPPHLVQPFGRFLSWRAGSTVNDYVKVGIIPWLILSTRVSKFVCRVV

Arabidopsis top hits

e value

%identity

Alignment

AT4G16444.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CHD5-like protein (InterPro:IPR007514); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

4.8e-54

61.93

Show/hide

Query:  MEAEGIVEHRRSIVAPSIFLIVVAFQFLARWLEQLKKKGSNNQVEMELRKSIKQLLREASALSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEMKTSY
        ME E ++E R  + AP  F++VV FQ L++WL+QLKKKGS N  E ELR  IKQLLREASALSQP+TFAQAAKLRR AA KEKELA Y E  +KE+K SY
Subjt:  MEAEGIVEHRRSIVAPSIFLIVVAFQFLARWLEQLKKKGSNNQVEMELRKSIKQLLREASALSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEMKTSY

Query:  DLFSRVLLMSKVLIYIVLVCWFWRASVASVPPHLVQPFGRFLSWRAGSTVNDYVKVGIIPWLILSTRVSKFVCRVV
        D++ + LL SKV+IY++LV  FWR  +A +   LVQPFG  LSW  G  +  +V VGIIPWLILS RVSK+VCR V
Subjt:  DLFSRVLLMSKVLIYIVLVCWFWRASVASVPPHLVQPFGRFLSWRAGSTVNDYVKVGIIPWLILSTRVSKFVCRVV

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAAGCTGAAGGAATCGTCGAGCATCGGAGATCGATTGTGGCTCCGTCCATTTTTCTGATCGTCGTTGCTTTTCAGTTTCTTGCTAGATGGTTGGAGCAGCTCAAGAA
GAAAGGTTCAAACAATCAGGTGGAAATGGAGTTGCGCAAATCAATAAAGCAACTTCTGAGGGAGGCAAGCGCCTTATCTCAACCATCTACATTTGCACAAGCTGCAAAAC
TTCGGAGGTTGGCAGCTGCTAAGGAGAAGGAACTGGCAAATTATCAAGAATCGCGGAATAAGGAGATGAAAACATCATATGATTTATTTAGTCGAGTATTGCTGATGTCA
AAGGTTTTGATATATATTGTGCTGGTTTGCTGGTTTTGGAGAGCTTCTGTGGCTTCTGTACCTCCTCATCTTGTGCAGCCATTTGGGAGATTTTTATCTTGGAGGGCTGG
AAGTACCGTAAATGATTATGTGAAGGTTGGAATTATACCATGGTTGATACTGTCAACACGGGTTAGCAAATTTGTTTGTCGAGTGGTCTAG

mRNA sequence

Show/hide mRNA sequence

CGATTAACGCGTATTGAGGTAATCATTCATCTCACTACTTGAGGGTAGTTTCGTAACTTTGCTTTTTCCTGAGATATTTTCTCTCGTGCTGAACAAAACGCTGCGTTTTG
TTCCTCCGTAAACTTGCCTGGGCCTTGGGTTTTGGGCTTGGATTTGTGGAGCCCATTTGTTGTGAATTATCGAAGCCCAACTTCTGGCCCAACGTTTTTCTGAATTACTT
CTGATTGGGAGTTTTGATCAACTCACGGTTGTGGTAAAGAAATCCTCTGAAAATGGAAGCTGAAGGAATCGTCGAGCATCGGAGATCGATTGTGGCTCCGTCCATTTTTC
TGATCGTCGTTGCTTTTCAGTTTCTTGCTAGATGGTTGGAGCAGCTCAAGAAGAAAGGTTCAAACAATCAGGTGGAAATGGAGTTGCGCAAATCAATAAAGCAACTTCTG
AGGGAGGCAAGCGCCTTATCTCAACCATCTACATTTGCACAAGCTGCAAAACTTCGGAGGTTGGCAGCTGCTAAGGAGAAGGAACTGGCAAATTATCAAGAATCGCGGAA
TAAGGAGATGAAAACATCATATGATTTATTTAGTCGAGTATTGCTGATGTCAAAGGTTTTGATATATATTGTGCTGGTTTGCTGGTTTTGGAGAGCTTCTGTGGCTTCTG
TACCTCCTCATCTTGTGCAGCCATTTGGGAGATTTTTATCTTGGAGGGCTGGAAGTACCGTAAATGATTATGTGAAGGTTGGAATTATACCATGGTTGATACTGTCAACA
CGGGTTAGCAAATTTGTTTGTCGAGTGGTCTAGTAAACAAGTGATTTAAGGTAAGTATGATGTTGATGATAAACATCACATGCTCTATGTAATGTAATAAATATTTGGAA
AGCGTTTTTTTTTTTTTTCTGAATTTGAGCAAAGGCAGGCTGGAGAAGTTTTTTACCGCCCCACCCGTTTTTTCTAATATAAATATAAAAGGAGGCTGAGCATGGTTATA
T

Protein sequence

Show/hide protein sequence

MEAEGIVEHRRSIVAPSIFLIVVAFQFLARWLEQLKKKGSNNQVEMELRKSIKQLLREASALSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEMKTSYDLFSRVLLMS
KVLIYIVLVCWFWRASVASVPPHLVQPFGRFLSWRAGSTVNDYVKVGIIPWLILSTRVSKFVCRVV

Sed0016741 (gene) of Chayote v1 genome