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Sed0016745 (gene) of Chayote v1 genome

Gene IDSed0016745
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG05:5351290..5353422
RNA-Seq ExpressionSed0016745
SyntenySed0016745
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OXA39199.1 hypothetical protein Fcan01_26054 [Folsomia candida]1.1e-0844.07Show/hide
Query:  HTHRDGGHALHVNPGRGRVPPVHTARDGRHVDHVHDG-GHADPVRDG-GHAPHVDRGRGHVPLVHIARDGGHAPHVDLGRGHVPLVHIARDGGHAPRVDH
        H HR  GH  HV+ GRG    VH  RD R+ DHVH G G+ D V+ G GH  HV RGRG+    H+ R  G+  HV  GRGH    H+ RD G+   V  
Subjt:  HTHRDGGHALHVNPGRGRVPPVHTARDGRHVDHVHDG-GHADPVRDG-GHAPHVDRGRGHVPLVHIARDGGHAPHVDLGRGHVPLVHIARDGGHAPRVDH

Query:  GRGRVPLVHTAHDERHVD
        GRG     H  H+    D
Subjt:  GRGRVPLVHTAHDERHVD

XP_003093512.1 hypothetical protein CRE_27851 [Caenorhabditis remanei]1.3e-0632.83Show/hide
Query:  HDTPRVPHVDPAH---DARHAPHVDPGC-GRVPPVHTHRDGGHALHVNPGRGRVPPVHTARDGRHVDHVHDGGHADP------------VRDGGHAPHVD
        H T    H D  H   +  HAPH + G  G     H H+DG HA H   G       HTA  G H  H    GH  P             +DG HAPH +
Subjt:  HDTPRVPHVDPAH---DARHAPHVDPGC-GRVPPVHTHRDGGHALHVNPGRGRVPPVHTARDGRHVDHVHDGGHADP------------VRDGGHAPHVD

Query:  RGRGHVPLVHIARDG-------GHAPHVDLGRGHVPLVHIARDG--GHAPRVDHGRGRVPLVHTA--HDERHVDHARDGGHEDLVRDGGHAELVCHTA
         G  H    H  +DG        HAPH + G  H    H    G   HAP  +HG       H    H   H +H    GH +  +DG HA    HTA
Subjt:  RGRGHVPLVHIARDG-------GHAPHVDLGRGHVPLVHIARDG--GHAPRVDHGRGRVPLVHTA--HDERHVDHARDGGHEDLVRDGGHAELVCHTA

TrEMBL top hitse value%identityAlignment
A0A226D1V0 Uncharacterized protein5.2e-0944.07Show/hide
Query:  HTHRDGGHALHVNPGRGRVPPVHTARDGRHVDHVHDG-GHADPVRDG-GHAPHVDRGRGHVPLVHIARDGGHAPHVDLGRGHVPLVHIARDGGHAPRVDH
        H HR  GH  HV+ GRG    VH  RD R+ DHVH G G+ D V+ G GH  HV RGRG+    H+ R  G+  HV  GRGH    H+ RD G+   V  
Subjt:  HTHRDGGHALHVNPGRGRVPPVHTARDGRHVDHVHDG-GHADPVRDG-GHAPHVDRGRGHVPLVHIARDGGHAPHVDLGRGHVPLVHIARDGGHAPRVDH

Query:  GRGRVPLVHTAHDERHVD
        GRG     H  H+    D
Subjt:  GRGRVPLVHTAHDERHVD

A0A2P4V1U7 Uncharacterized protein (Fragment)6.4e-0732.83Show/hide
Query:  HDTPRVPHVDPAH---DARHAPHVDPGC-GRVPPVHTHRDGGHALHVNPGRGRVPPVHTARDGRHVDHVHDGGHADP------------VRDGGHAPHVD
        H T    H D  H   +  HAPH + G  G     H H+DG HA H   G       HTA  G H  H    GH  P             +DG HAPH +
Subjt:  HDTPRVPHVDPAH---DARHAPHVDPGC-GRVPPVHTHRDGGHALHVNPGRGRVPPVHTARDGRHVDHVHDGGHADP------------VRDGGHAPHVD

Query:  RGRGHVPLVHIARDG-------GHAPHVDLGRGHVPLVHIARDG--GHAPRVDHGRGRVPLVHTA--HDERHVDHARDGGHEDLVRDGGHAELVCHTA
         G  H    H  +DG        HAPH + G  H    H    G   HAP  +HG       H    H   H +H    GH +  +DG HA    HTA
Subjt:  RGRGHVPLVHIARDG-------GHAPHVDLGRGHVPLVHIARDG--GHAPRVDHGRGRVPLVHTA--HDERHVDHARDGGHEDLVRDGGHAELVCHTA

A0A803K4J7 Uncharacterized protein1.1e-0637.31Show/hide
Query:  VPHVDPAHDARHAPHVDPGCGRVPPVHTHRDGGHALHVNPGRGRVPPVHTARDGRHVDHVHDG----GHADPVRDGGHAPHVDRGRGHVPLVHIARDGGH
        VPH+ P   A    H+ P  G     H +   G   H++PGRG V P +  R G    H+  G     H  P + GG  PH+  GRG VP  +I R GG 
Subjt:  VPHVDPAHDARHAPHVDPGCGRVPPVHTHRDGGHALHVNPGRGRVPPVHTARDGRHVDHVHDG----GHADPVRDGGHAPHVDRGRGHVPLVHIARDGGH

Query:  APHVDLGRGHVPLVHIARDGGHAPRVDHGRGRVP
         PH+  GRG  P  HI+   G  P +  GRG  P
Subjt:  APHVDLGRGHVPLVHIARDGGHAPRVDHGRGRVP

E3NDK4 Uncharacterized protein6.4e-0732.83Show/hide
Query:  HDTPRVPHVDPAH---DARHAPHVDPGC-GRVPPVHTHRDGGHALHVNPGRGRVPPVHTARDGRHVDHVHDGGHADP------------VRDGGHAPHVD
        H T    H D  H   +  HAPH + G  G     H H+DG HA H   G       HTA  G H  H    GH  P             +DG HAPH +
Subjt:  HDTPRVPHVDPAH---DARHAPHVDPGC-GRVPPVHTHRDGGHALHVNPGRGRVPPVHTARDGRHVDHVHDGGHADP------------VRDGGHAPHVD

Query:  RGRGHVPLVHIARDG-------GHAPHVDLGRGHVPLVHIARDG--GHAPRVDHGRGRVPLVHTA--HDERHVDHARDGGHEDLVRDGGHAELVCHTA
         G  H    H  +DG        HAPH + G  H    H    G   HAP  +HG       H    H   H +H    GH +  +DG HA    HTA
Subjt:  RGRGHVPLVHIARDG-------GHAPHVDLGRGHVPLVHIARDG--GHAPRVDHGRGRVPLVHTA--HDERHVDHARDGGHEDLVRDGGHAELVCHTA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGATGATGTTGATCTAAACCAGAGCAATCCCCTTCCTTCTTTTTCCGATGTTCCTTCTTCGGCTTGCACGACCCTCCTGAATCGTCCTGCACCGCGCATGAGCCC
TGGCCATGATTGTGACCGTGCTCAGCCACTGGACCCTGCCCGTGATGCTCCTCGTGTGCTACTGGCTGACACTGGTCGTATGCCGTTGACGAACCCTGCCCATGATACTC
CCCGTGTGCCACATGTGGACCCTGCCCATGATGCTCGCCATGCGCCACATGTGGACCCTGGTTGTGGCCGTGTGCCCCCGGTGCACACTCATCGTGATGGTGGCCATGCA
CTACATGTGAACCCTGGCCGTGGCCGTGTGCCACCGGTGCACACTGCCCGTGATGGCCGCCATGTGGACCATGTCCATGATGGTGGCCATGCGGACCCTGTCCGTGATGG
TGGCCATGCCCCACATGTGGACCGTGGCCGTGGCCATGTCCCGCTGGTGCACATTGCCCGTGATGGTGGCCATGCCCCCCATGTGGACCTTGGCCGTGGCCATGTCCCGC
TGGTGCACATTGCCCGTGATGGTGGCCATGCCCCCCGTGTGGACCATGGCCGTGGCCGTGTGCCACTGGTGCACACTGCCCATGATGAGCGCCATGTGGACCATGCCCGT
GATGGTGGCCATGAGGACCTTGTCCGTGATGGGGGCCATGCTGAGCTGGTTTGCCACACCGCTGAAAAGTCATGGATGCTAAAGATAGAGCGTTTGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGATGATGTTGATCTAAACCAGAGCAATCCCCTTCCTTCTTTTTCCGATGTTCCTTCTTCGGCTTGCACGACCCTCCTGAATCGTCCTGCACCGCGCATGAGCCC
TGGCCATGATTGTGACCGTGCTCAGCCACTGGACCCTGCCCGTGATGCTCCTCGTGTGCTACTGGCTGACACTGGTCGTATGCCGTTGACGAACCCTGCCCATGATACTC
CCCGTGTGCCACATGTGGACCCTGCCCATGATGCTCGCCATGCGCCACATGTGGACCCTGGTTGTGGCCGTGTGCCCCCGGTGCACACTCATCGTGATGGTGGCCATGCA
CTACATGTGAACCCTGGCCGTGGCCGTGTGCCACCGGTGCACACTGCCCGTGATGGCCGCCATGTGGACCATGTCCATGATGGTGGCCATGCGGACCCTGTCCGTGATGG
TGGCCATGCCCCACATGTGGACCGTGGCCGTGGCCATGTCCCGCTGGTGCACATTGCCCGTGATGGTGGCCATGCCCCCCATGTGGACCTTGGCCGTGGCCATGTCCCGC
TGGTGCACATTGCCCGTGATGGTGGCCATGCCCCCCGTGTGGACCATGGCCGTGGCCGTGTGCCACTGGTGCACACTGCCCATGATGAGCGCCATGTGGACCATGCCCGT
GATGGTGGCCATGAGGACCTTGTCCGTGATGGGGGCCATGCTGAGCTGGTTTGCCACACCGCTGAAAAGTCATGGATGCTAAAGATAGAGCGTTTGTTTTGA
Protein sequenceShow/hide protein sequence
MIDDVDLNQSNPLPSFSDVPSSACTTLLNRPAPRMSPGHDCDRAQPLDPARDAPRVLLADTGRMPLTNPAHDTPRVPHVDPAHDARHAPHVDPGCGRVPPVHTHRDGGHA
LHVNPGRGRVPPVHTARDGRHVDHVHDGGHADPVRDGGHAPHVDRGRGHVPLVHIARDGGHAPHVDLGRGHVPLVHIARDGGHAPRVDHGRGRVPLVHTAHDERHVDHAR
DGGHEDLVRDGGHAELVCHTAEKSWMLKIERLF