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Sed0016756 (gene) of Chayote v1 genome

Gene IDSed0016756
OrganismSechium edule (Chayote v1)
DescriptionProtein transport protein Sec61 subunit gamma
Genome locationLG01:11319774..11322117
RNA-Seq ExpressionSed0016756
SyntenySed0016756
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0015031 - protein transport (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR023391 - Protein translocase SecE domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH02933.1 secE/sec61-gamma protein transport protein [Prunus dulcis]2.7e-1760.71Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGMILFFYMDLIQFRIHQGCRPYRHRIRCDGIRRVLRQANLHSDQQHHRRIWLG
        MDA+DSVVDPLREF+KDS+RLVKRCHKPDRKG                   PY  R+R DGIRRVLR+A+LH  QQHH  I LG
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGMILFFYMDLIQFRIHQGCRPYRHRIRCDGIRRVLRQANLHSDQQHHRRIWLG

KAF4367686.1 hypothetical protein G4B88_001438 [Cannabis sativa]1.2e-1762.65Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGMILFFYMDLIQFRIHQGCRPYRHRIRCDGIRRVLRQANLHSDQQHHRRIWL
        MDA+DSV DPLREF+KDS+RLVKRCHKPDRKG   FF +      I QGC PY   +  DGIR +L +ANLH  QQ+HR IWL
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGMILFFYMDLIQFRIHQGCRPYRHRIRCDGIRRVLRQANLHSDQQHHRRIWL

KAG6793332.1 hypothetical protein POTOM_002538 [Populus tomentosa]7.9e-1760.26Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGMILFFYMDLIQFRIHQGCRPYRHRIRCDGIRRVLRQANLHSDQQHH
        MDA+DSV DPLREF+KDSVRLVKRCHKPDRK  +      +  FR+H+G  PY  RIR DGIRR L + +++  QQHH
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGMILFFYMDLIQFRIHQGCRPYRHRIRCDGIRRVLRQANLHSDQQHH

RWW86562.1 hypothetical protein BHE74_00004670 [Ensete ventricosum]7.9e-1747.06Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGMILFFYMDLI-----------------------------------QFRIHQGCRPYRHRIRCDGIRRV
        MDA+DSVVDPLREFAKDSVRLVKRCHKPDRKG  L     ++                                     R+ +G  P+  R+R DGIRR 
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGMILFFYMDLI-----------------------------------QFRIHQGCRPYRHRIRCDGIRRV

Query:  LRQANLHSDQQHHRRIWLG
        LRQA+L+SDQQHH R+ LG
Subjt:  LRQANLHSDQQHHRRIWLG

RXH96988.1 hypothetical protein DVH24_035656 [Malus domestica]5.0e-1965.48Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGMILFFYMDLIQFRIHQGCRPYRHRIRCDGIRRVLRQANLHSDQQHHRRIWLG
        MDA+DSVVDPLREF+KDS+RLVKRCHKPDRKG           F I QG  P   R+R DG RRVLRQA+LH  QQ+HRRI LG
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGMILFFYMDLIQFRIHQGCRPYRHRIRCDGIRRVLRQANLHSDQQHHRRIWLG

TrEMBL top hitse value%identityAlignment
A0A0A0LUE9 Uncharacterized protein1.9e-3283.72Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGMILFFYM---DLIQFRIHQGCRPYRHRIRCDGIRRVLRQANLHSDQQHHRRIWL
        MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGM L F +   DLI+FRIHQGCR YR+R+RCDGI RVL QANLHSDQQ+HRRIWL
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGMILFFYM---DLIQFRIHQGCRPYRHRIRCDGIRRVLRQANLHSDQQHHRRIWL

A0A444FRX1 Uncharacterized protein3.8e-1747.06Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGMILFFYMDLI-----------------------------------QFRIHQGCRPYRHRIRCDGIRRV
        MDA+DSVVDPLREFAKDSVRLVKRCHKPDRKG  L     ++                                     R+ +G  P+  R+R DGIRR 
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGMILFFYMDLI-----------------------------------QFRIHQGCRPYRHRIRCDGIRRV

Query:  LRQANLHSDQQHHRRIWLG
        LRQA+L+SDQQHH R+ LG
Subjt:  LRQANLHSDQQHHRRIWLG

A0A498JML6 Uncharacterized protein2.4e-1965.48Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGMILFFYMDLIQFRIHQGCRPYRHRIRCDGIRRVLRQANLHSDQQHHRRIWLG
        MDA+DSVVDPLREF+KDS+RLVKRCHKPDRKG           F I QG  P   R+R DG RRVLRQA+LH  QQ+HRRI LG
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGMILFFYMDLIQFRIHQGCRPYRHRIRCDGIRRVLRQANLHSDQQHHRRIWLG

A0A4Y1RGY7 SecE/sec61-gamma protein transport protein1.3e-1760.71Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGMILFFYMDLIQFRIHQGCRPYRHRIRCDGIRRVLRQANLHSDQQHHRRIWLG
        MDA+DSVVDPLREF+KDS+RLVKRCHKPDRKG                   PY  R+R DGIRRVLR+A+LH  QQHH  I LG
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGMILFFYMDLIQFRIHQGCRPYRHRIRCDGIRRVLRQANLHSDQQHHRRIWLG

A0A7J6FAH1 Uncharacterized protein5.9e-1862.65Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGMILFFYMDLIQFRIHQGCRPYRHRIRCDGIRRVLRQANLHSDQQHHRRIWL
        MDA+DSV DPLREF+KDS+RLVKRCHKPDRKG   FF +      I QGC PY   +  DGIR +L +ANLH  QQ+HR IWL
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGMILFFYMDLIQFRIHQGCRPYRHRIRCDGIRRVLRQANLHSDQQHHRRIWL

SwissProt top hitse value%identityAlignment
P0DI74 Protein transport protein Sec61 subunit gamma-14.4e-1090.32Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRK
        MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRK
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRK

P0DI75 Protein transport protein Sec61 subunit gamma-24.4e-1090.32Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRK
        MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRK
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRK

P38385 Protein transport protein Sec61 subunit gamma1.2e-10100Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRK
        MDAVDSVVDPLREFAKDSVRLVKRCHKPDRK
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRK

Q7Z1B8 Protein transport protein Sec61 subunit gamma4.2e-0567.74Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRK
        MD V   ++P R+FAKDS+RLVKRC KPDRK
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRK

Q9SMP2 Protein transport protein Sec61 subunit gamma-35.4e-0877.42Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRK
        M+A+DS +DPLR+FAK SVRLV+RCHKPDRK
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRK

Arabidopsis top hitse value%identityAlignment
AT3G48570.1 secE/sec61-gamma protein transport protein3.8e-0977.42Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRK
        M+A+DS +DPLR+FAK SVRLV+RCHKPDRK
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRK

AT4G24920.1 secE/sec61-gamma protein transport protein3.1e-1190.32Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRK
        MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRK
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRK

AT5G50460.1 secE/sec61-gamma protein transport protein3.1e-1190.32Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRK
        MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRK
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCCGTAGATTCAGTCGTCGATCCGCTCAGAGAATTCGCCAAGGACAGCGTTCGTCTCGTCAAGAGGTGTCACAAACCCGATCGCAAGGGTATGATTCTTTTCTT
TTACATGGATCTGATTCAATTCAGAATTCACCAAGGTTGCCGTCCGTACCGCCATCGGATTCGTTGTGATGGGATTCGTAGGGTTCTTCGTCAAGCTAATCTTCATTCCG
ATCAACAACATCATCGTCGGATCTGGTTAGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGCCGTAGATTCAGTCGTCGATCCGCTCAGAGAATTCGCCAAGGACAGCGTTCGTCTCGTCAAGAGGTGTCACAAACCCGATCGCAAGGGTATGATTCTTTTCTT
TTACATGGATCTGATTCAATTCAGAATTCACCAAGGTTGCCGTCCGTACCGCCATCGGATTCGTTGTGATGGGATTCGTAGGGTTCTTCGTCAAGCTAATCTTCATTCCG
ATCAACAACATCATCGTCGGATCTGGTTAGGTTAGGTATGCATCTAATCCAATAGATCTTGTGATTTCCGTTTTCGATCTGGCTTTATTTGTTTTGCATCATGCCCTTAT
TATTGACGATTTTTGCAATTGTGGAACGGATCGATGAGAGAAGTCTGCTTCGTGATTTTTTTTTTGTTTGCTTTACGATTAGATCATTTACTTCTTAGATTTTCGTTCGT
TTCATGTGCATGCGATGATTGTCGATTTTTACGACATTGTAGCTTCATTCATGATCGATCTAAACGATTGAAGATGATACCATTAGCGTTGATGCTTTTTTAGATCACAG
CGTTCCTAATTTTCAAGCATTTTGGTTGTGGATTTGCTTTTTTTCTTTTCCTTCCAAGATAGCTTTGGTTTCTGTTGAGATTCGTCAAGAAACATTATAGACGCACTCTG
TTAACTAACTTTTCTACTTCAATCCGGGTAATCGGGATTTTTCTGCAGTCGATCTTCAGATGATATGGTTTCAATATCTGAGTCCAGTTTGTTGTTCCCCTCTCTTCTTT
GTATGTTAAATTGTGATTTTTGGAATTTTCTAAATGCTCTAACCTTAGGTAGTTTGCTCATTACCTCCAACCTCCTTCAGACTTGATGATGACCATCTTAATTAGCATAT
TTTGGCATGGATCTCCGAGAAACTTTTATTAGAAGTCATTTACCAAATAGCAATGTCATATCTATATAATTAAACGATTGTGGATTGTTAGCATTTCTTCTACTCGCTTA
TTTCACTGTGTGCATGCACGTTCAATCTTGCTCATCTGAAAAACAAATGTTTATTAGATGTGAGAGCAGGGCAGGGCCAAGATGGAAGGAGGGGAATTTCACTTCTTTAT
AATTACCCAGGATTTCGTAGTTTCCTCTAAGCTCTCCTCCCCCAAGTCCAACAAAAACCCTTGGGATTGAAATATTACATGTAAAAGAAGTTAGAATGTGATAATTTGTC
CCTTTAAGAATTTTCTAGTTCTGCGTCGAGAGATATACCGTCTTTTGTACCTTAAATTTCTCTTTCATATCCCCTTAAAAATCTTTCAACTGAATATTTGAATACAAGGA
AAGATTAGTATATCAAAGAGTCATCTTTTGTCTGTTGAAAGAATTAAGCAAGGTTTTATCTTTTAACTGTTTCTAGCTACCTTTTGTAGCAACACTGCTATCCTAGTGCT
TCAGGGTCATCATTTAAGTGTAAAGATATTGAATCAAAAGCTTATCTGTTAAAAGATATTGAAAAAAAAGCTTATCCGATAAAAGTGTGTTTTGTTTGCTGACAGACATT
GAAACAAAAAGGTTAGAAGTGAGAAACTTTGGAAGTAGAGAATGAGATTAGTTAGTATAATATGCATTAGAATGACTGAATGAGAAGCATGAGATTTGTTTTTTTTGATA
TCCAATAGTGTTCGGGCCGACGCACCTTGACCATTCTCATGGCACAACATCATACAAAATTTGATTCTTAAGAAAGTCCTAGCTAGGTAGCTGTAATGAGAAGTAATTAA
CAATGAGGATTGCAAAAATACAATTCTGAGACCGGCTCCTACAAGATTCGTGCTTGTAATGATGGAGTACGAAGGCGA
Protein sequenceShow/hide protein sequence
MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGMILFFYMDLIQFRIHQGCRPYRHRIRCDGIRRVLRQANLHSDQQHHRRIWLG