; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0016768 (gene) of Chayote v1 genome

Gene IDSed0016768
OrganismSechium edule (Chayote v1)
DescriptionC2H2-type domain-containing protein
Genome locationLG02:50106264..50106731
RNA-Seq ExpressionSed0016768
SyntenySed0016768
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650335.1 hypothetical protein Csa_010297 [Cucumis sativus]2.2e-4966.47Show/hide
Query:  MEFVKQGSWDSSGDECEPR------------DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHPPNFVPSSSSQYSNGHQIYPN-APTQP--PA
        M+F KQGSWDSS DE E +            DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKH  NF+ SSSS +SN  Q +P   PTQP  P+
Subjt:  MEFVKQGSWDSSGDECEPR------------DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHPPNFVPSSSSQYSNGHQIYPN-APTQP--PA

Query:  VYYPPPPPSYRMYFDTAADMAGNFPVHGQRLQN--VNEELLGANLSLQVHQSRGV-WNHEEVDLELRLGHEYR
         Y  PPPPSYRMYFDTAA    NFP+H Q      VN+ELLGANLSL++ Q+RGV W +EE+DLELRLGHEYR
Subjt:  VYYPPPPPSYRMYFDTAADMAGNFPVHGQRLQN--VNEELLGANLSLQVHQSRGV-WNHEEVDLELRLGHEYR

XP_004134420.3 zinc finger protein 10 [Cucumis sativus]2.2e-4966.47Show/hide
Query:  MEFVKQGSWDSSGDECEPR------------DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHPPNFVPSSSSQYSNGHQIYPN-APTQP--PA
        M+F KQGSWDSS DE E +            DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKH  NF+ SSSS +SN  Q +P   PTQP  P+
Subjt:  MEFVKQGSWDSSGDECEPR------------DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHPPNFVPSSSSQYSNGHQIYPN-APTQP--PA

Query:  VYYPPPPPSYRMYFDTAADMAGNFPVHGQRLQN--VNEELLGANLSLQVHQSRGV-WNHEEVDLELRLGHEYR
         Y  PPPPSYRMYFDTAA    NFP+H Q      VN+ELLGANLSL++ Q+RGV W +EE+DLELRLGHEYR
Subjt:  VYYPPPPPSYRMYFDTAADMAGNFPVHGQRLQN--VNEELLGANLSLQVHQSRGV-WNHEEVDLELRLGHEYR

XP_008439363.1 PREDICTED: zinc finger protein 7 [Cucumis melo]4.4e-5368.21Show/hide
Query:  MEFVKQGSWDSSGDECEPR-------------DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHPPNFVPSSSSQYSNGHQIYPN-APTQP--P
        M+F KQGSWDSS DE EP+             DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKH  NF+ SSSS +SN  Q +P   PTQP  P
Subjt:  MEFVKQGSWDSSGDECEPR-------------DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHPPNFVPSSSSQYSNGHQIYPN-APTQP--P

Query:  AVYYPPPPPSYRMYFDTAADMAGNFPVHGQRLQN--VNEELLGANLSLQVHQSRGVWNHEEVDLELRLGHEYR
        + Y+ PPPPSYRMYFDTAA    NFP+H Q      VN+ELLGANLSLQ+ Q+RGVWN+EE+DLELRLGHEYR
Subjt:  AVYYPPPPPSYRMYFDTAADMAGNFPVHGQRLQN--VNEELLGANLSLQVHQSRGVWNHEEVDLELRLGHEYR

XP_022151484.1 zinc finger protein 8-like [Momordica charantia]2.2e-4964.5Show/hide
Query:  MEFVKQGSWDSSGDECEPR---------DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHPPNFVPSSSSQYSNGHQIYPNAPTQPPAVYYPPP
        M+F KQGSWDSS DE  P+         DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAK   N +PSSSS   +  QI+P     P A YYPPP
Subjt:  MEFVKQGSWDSSGDECEPR---------DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHPPNFVPSSSSQYSNGHQIYPNAPTQPPAVYYPPP

Query:  PP-----SYRMYFDTAADMAGNFPVHGQRLQNVNEELLGANLSLQVHQSRGVWNHEEVDLELRLGHEYR
        P      +YRMYFDT A  A N+P+H  R Q  NE+LLGANL+LQ+ Q+RGVW +EE+DLELRLGHEYR
Subjt:  PP-----SYRMYFDTAADMAGNFPVHGQRLQNVNEELLGANLSLQVHQSRGVWNHEEVDLELRLGHEYR

XP_038877191.1 zinc finger protein 7-like [Benincasa hispida]6.3e-5267.65Show/hide
Query:  MEFVKQGSWDSSGDECEPR------------DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHPPNFVPSSSSQYSNGH-QIYPNAPTQPPAVY
        M+F KQGSWDSS DE EP+            DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKH  NF+ SSSS +S+ + Q +P  PTQP   Y
Subjt:  MEFVKQGSWDSSGDECEPR------------DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHPPNFVPSSSSQYSNGH-QIYPNAPTQPPAVY

Query:  YPPPPPSYRMYFDTAADMAGNFPVHGQRLQN--VNEELLGANLSLQVHQSRGVWNHEEVDLELRLGHEYR
        Y PPPPSYRMYFDTA   A NFP+H Q      VN++LLGANLSLQ+ Q+RGVW +EE+DLELRLGHEYR
Subjt:  YPPPPPSYRMYFDTAADMAGNFPVHGQRLQN--VNEELLGANLSLQVHQSRGVWNHEEVDLELRLGHEYR

TrEMBL top hitse value%identityAlignment
A0A1S3AZA2 zinc finger protein 72.1e-5368.21Show/hide
Query:  MEFVKQGSWDSSGDECEPR-------------DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHPPNFVPSSSSQYSNGHQIYPN-APTQP--P
        M+F KQGSWDSS DE EP+             DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKH  NF+ SSSS +SN  Q +P   PTQP  P
Subjt:  MEFVKQGSWDSSGDECEPR-------------DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHPPNFVPSSSSQYSNGHQIYPN-APTQP--P

Query:  AVYYPPPPPSYRMYFDTAADMAGNFPVHGQRLQN--VNEELLGANLSLQVHQSRGVWNHEEVDLELRLGHEYR
        + Y+ PPPPSYRMYFDTAA    NFP+H Q      VN+ELLGANLSLQ+ Q+RGVWN+EE+DLELRLGHEYR
Subjt:  AVYYPPPPPSYRMYFDTAADMAGNFPVHGQRLQN--VNEELLGANLSLQVHQSRGVWNHEEVDLELRLGHEYR

A0A6J1DD81 zinc finger protein 8-like1.1e-4964.5Show/hide
Query:  MEFVKQGSWDSSGDECEPR---------DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHPPNFVPSSSSQYSNGHQIYPNAPTQPPAVYYPPP
        M+F KQGSWDSS DE  P+         DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAK   N +PSSSS   +  QI+P     P A YYPPP
Subjt:  MEFVKQGSWDSSGDECEPR---------DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHPPNFVPSSSSQYSNGHQIYPNAPTQPPAVYYPPP

Query:  PP-----SYRMYFDTAADMAGNFPVHGQRLQNVNEELLGANLSLQVHQSRGVWNHEEVDLELRLGHEYR
        P      +YRMYFDT A  A N+P+H  R Q  NE+LLGANL+LQ+ Q+RGVW +EE+DLELRLGHEYR
Subjt:  PP-----SYRMYFDTAADMAGNFPVHGQRLQNVNEELLGANLSLQVHQSRGVWNHEEVDLELRLGHEYR

A0A6J1GCF2 transcriptional regulator SUPERMAN-like2.3e-4767.07Show/hide
Query:  MEFVKQGSWDSSGDECE-------PRDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHPPNFVPSSSSQYSNGHQIYPNAPTQPPAVYYPPPPP
        M+F KQGSWDS  DE E         D TKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAK        +SS +SN HQI+P+  +QP A    P PP
Subjt:  MEFVKQGSWDSSGDECE-------PRDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHPPNFVPSSSSQYSNGHQIYPNAPTQPPAVYYPPPPP

Query:  SYRMYFD-TAADMAGNFPVHGQRLQNVNEE-LLGANLSLQVHQSRGVWNHEEVDLELRLGHEYR
        SYRMYFD TAA MA N P+H QR ++VNEE LLGANLSLQ+ Q+RGVW +EE+DLELRLGHEYR
Subjt:  SYRMYFD-TAADMAGNFPVHGQRLQNVNEE-LLGANLSLQVHQSRGVWNHEEVDLELRLGHEYR

A0A6J1IGJ1 zinc finger protein 11-like5.4e-4968.9Show/hide
Query:  MEFVKQGSWDSSGDECE-------PRDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHPPNFVPSSSSQYSNGHQIYPNAPTQPPAVYYPPPPP
        M+F KQG WDS  DE E         D TKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKH       +SS +SN HQI+P+  TQP A    P PP
Subjt:  MEFVKQGSWDSSGDECE-------PRDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHPPNFVPSSSSQYSNGHQIYPNAPTQPPAVYYPPPPP

Query:  SYRMYFD-TAADMAGNFPVHGQRLQNVNEE-LLGANLSLQVHQSRGVWNHEEVDLELRLGHEYR
        SYRMYFD TAA MA NFP+H QR ++V+EE LLGANLSLQV Q+RGVW +EEVDLELRLGHEYR
Subjt:  SYRMYFD-TAADMAGNFPVHGQRLQNVNEE-LLGANLSLQVHQSRGVWNHEEVDLELRLGHEYR

A0A6J1IWL0 zinc finger protein 11-like3.9e-4762.71Show/hide
Query:  MEFVKQGSWDSSGDECEP-----------------RDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHPPNFVPSSSSQYSNGHQIYPNAPTQP
        M+F KQGS DSS DE +P                  DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAK KH  NF  SSSS   +  Q++P   TQP
Subjt:  MEFVKQGSWDSSGDECEP-----------------RDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHPPNFVPSSSSQYSNGHQIYPNAPTQP

Query:  PAVYYPPPP---PSYRMYFDTAADMAGNFPVHGQRLQN--VNEELLGANLSLQVHQSRGVWNHEEVDLELRLGHEYR
           YYPPPP    SYRMYFDTAA    NFP+H Q      VN+EL GANLSLQ+ Q+RGVW +EEVDLELRLGHEYR
Subjt:  PAVYYPPPP---PSYRMYFDTAADMAGNFPVHGQRLQN--VNEELLGANLSLQVHQSRGVWNHEEVDLELRLGHEYR

SwissProt top hitse value%identityAlignment
O80942 Zinc finger protein 109.9e-0842.11Show/hide
Query:  KQGSWDS---SGDECEPRDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHPPN---FVPSSSSQYSNGHQ
        K+ SW+    + D+        R Y C+FC+R F +AQALGGHMN+HR+DRA+ K   +   F  SSSS     H+
Subjt:  KQGSWDS---SGDECEPRDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHPPN---FVPSSSSQYSNGHQ

Q38895 Transcriptional regulator SUPERMAN4.4e-0840.48Show/hide
Query:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAK--HPPNFVPSSSSQYSNGHQIYPNAPTQPP---------AVYYPPPPPSYR
        R Y C+FCKR F +AQALGGHMN+HR+DRA+ +    P+   + S  Y N +  Y      PP             PP  P YR
Subjt:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAK--HPPNFVPSSSSQYSNGHQIYPNAPTQPP---------AVYYPPPPPSYR

Q9LHS9 Probable transcriptional regulator RABBIT EARS1.7e-0757.78Show/hide
Query:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHPPNFVPSSSSQ
        R Y C+FC R F +AQALGGHMN+HR+DRA+ K   +  PSS+ Q
Subjt:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHPPNFVPSSSSQ

Q9SLB8 Zinc finger protein 111.3e-0746.15Show/hide
Query:  YECTFCKRGFTNAQALGGHMNIHRKDRAK-----------------AKHPPNFVPSSSSQYSNGH
        Y C+FC+R F +AQALGGHMN+HR+DRAK                 A   PNF  SSSS  +  H
Subjt:  YECTFCKRGFTNAQALGGHMNIHRKDRAK-----------------AKHPPNFVPSSSSQYSNGH

Q9SR34 Transcriptional regulator TAC12.6e-0875.76Show/hide
Query:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAK
        R Y C+FC RGF+NAQALGGHMNIHR+DRAK +
Subjt:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAK

Arabidopsis top hitse value%identityAlignment
AT3G09290.1 telomerase activator11.8e-0975.76Show/hide
Query:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAK
        R Y C+FC RGF+NAQALGGHMNIHR+DRAK +
Subjt:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAK

AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein3.1e-0940.48Show/hide
Query:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAK--HPPNFVPSSSSQYSNGHQIYPNAPTQPP---------AVYYPPPPPSYR
        R Y C+FCKR F +AQALGGHMN+HR+DRA+ +    P+   + S  Y N +  Y      PP             PP  P YR
Subjt:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAK--HPPNFVPSSSSQYSNGHQIYPNAPTQPP---------AVYYPPPPPSYR

AT3G23140.1 C2H2 and C2HC zinc fingers superfamily protein6.3e-1032Show/hide
Query:  KRPYECTFCKRGFTNAQALGGHMNIHRKDR------AKAKHP-------PNFVPSSSSQYSNGHQIYPNAPTQPPAVYYPPPPPSYR-MYFDTAADM--A
        +R Y+C  CKRGFTN QALGGH NIHR++R      + + H        P+  PSSS+ ++N    +P   +       PP  PS+   YF +++     
Subjt:  KRPYECTFCKRGFTNAQALGGHMNIHRKDR------AKAKHP-------PNFVPSSSSQYSNGHQIYPNAPTQPPAVYYPPPPPSYR-MYFDTAADM--A

Query:  GNFPVHGQRLQNVNEELLGANLSLQVHQSRGVWNHE-----EVDLELRLG
        G F        N++  L   N     H+S            ++DL+LRLG
Subjt:  GNFPVHGQRLQNVNEELLGANLSLQVHQSRGVWNHE-----EVDLELRLG

AT3G53820.1 C2H2 and C2HC zinc fingers superfamily protein7.5e-1181.82Show/hide
Query:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAK
        RPY C FC+RGF+NAQALGGHMNIHRKDRAK +
Subjt:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAK

AT5G43540.1 C2H2 and C2HC zinc fingers superfamily protein2.3e-1236.36Show/hide
Query:  TKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHPPNFVPSSSSQYSNGHQIYPNAPTQPPAVYYPPPPPSYRMYFDTAADMAGNFPVHGQRLQNVNE
        T+R YECTFCKRGFTNAQALGGHMNIHR+DR       N    + SQ                         ++R  F  A+D+ G   V    L+    
Subjt:  TKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHPPNFVPSSSSQYSNGHQIYPNAPTQPPAVYYPPPPPSYRMYFDTAADMAGNFPVHGQRLQNVNE

Query:  ELLGANL--SLQVHQSRGVWNHEEVDLELRLG
          +      S+   +   V    E+DLELRLG
Subjt:  ELLGANL--SLQVHQSRGVWNHEEVDLELRLG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTTGTGAAACAGGGGAGCTGGGACAGTTCGGGCGACGAATGCGAGCCGCGGGATCCAACCAAACGGCCCTACGAGTGCACATTTTGCAAGCGCGGGTTCACCAA
CGCTCAAGCCCTTGGTGGCCACATGAACATCCACCGCAAGGACAGAGCCAAAGCCAAACACCCCCCCAATTTTGTTCCTTCCTCTTCTTCTCAATATTCCAACGGCCACC
AAATTTACCCCAATGCTCCAACCCAACCCCCCGCCGTCTACTACCCCCCGCCCCCGCCTTCTTATCGAATGTACTTCGACACCGCGGCCGACATGGCGGGGAACTTTCCG
GTTCACGGGCAGAGACTGCAGAATGTGAATGAAGAGCTGCTTGGGGCGAATCTTAGCCTGCAAGTTCATCAAAGTAGGGGTGTTTGGAATCATGAAGAAGTCGATTTGGA
GCTGCGATTAGGCCATGAATATCGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATTTGTGAAACAGGGGAGCTGGGACAGTTCGGGCGACGAATGCGAGCCGCGGGATCCAACCAAACGGCCCTACGAGTGCACATTTTGCAAGCGCGGGTTCACCAA
CGCTCAAGCCCTTGGTGGCCACATGAACATCCACCGCAAGGACAGAGCCAAAGCCAAACACCCCCCCAATTTTGTTCCTTCCTCTTCTTCTCAATATTCCAACGGCCACC
AAATTTACCCCAATGCTCCAACCCAACCCCCCGCCGTCTACTACCCCCCGCCCCCGCCTTCTTATCGAATGTACTTCGACACCGCGGCCGACATGGCGGGGAACTTTCCG
GTTCACGGGCAGAGACTGCAGAATGTGAATGAAGAGCTGCTTGGGGCGAATCTTAGCCTGCAAGTTCATCAAAGTAGGGGTGTTTGGAATCATGAAGAAGTCGATTTGGA
GCTGCGATTAGGCCATGAATATCGCTGA
Protein sequenceShow/hide protein sequence
MEFVKQGSWDSSGDECEPRDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHPPNFVPSSSSQYSNGHQIYPNAPTQPPAVYYPPPPPSYRMYFDTAADMAGNFP
VHGQRLQNVNEELLGANLSLQVHQSRGVWNHEEVDLELRLGHEYR