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Sed0016817 (gene) of Chayote v1 genome

Gene IDSed0016817
OrganismSechium edule (Chayote v1)
Descriptionflowering-promoting factor 1-like
Genome locationLG01:9805375..9805707
RNA-Seq ExpressionSed0016817
SyntenySed0016817
Gene Ontology termsGO:0009909 - regulation of flower development (biological process)
GO:0010228 - vegetative to reproductive phase transition of meristem (biological process)
InterPro domainsIPR039274 - Flowering-promoting factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652180.1 hypothetical protein Csa_021977 [Cucumis sativus]1.2e-5291.89Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRR-KVLVYLPTGQPVSSYSSLEEILSSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFGKFNSIHMYDIVI
        MSGVWVFKNGVIRLIENPQADSDGRLGNSRR KVL++LPTGQPV+SYSSLE IL+SLGWERYYGGDP+LFQFHKRSSIDLISLPRDF KFNSIHMYDIVI
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRR-KVLVYLPTGQPVSSYSSLEEILSSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFGKFNSIHMYDIVI

Query:  KNPNLFHVRDV
        KNPNLFHVRD+
Subjt:  KNPNLFHVRDV

XP_004138764.1 flowering-promoting factor 1 [Cucumis sativus]2.0e-5291.89Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRR-KVLVYLPTGQPVSSYSSLEEILSSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFGKFNSIHMYDIVI
        MSGVWVFKNGVIRLIENPQADSDGRLGNSRR KVL++LPTGQPV+SYSSLE IL+SLGWERYYGGDP+LFQFHKRSSIDLISLPRDF KFNSIHMYDIVI
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRR-KVLVYLPTGQPVSSYSSLEEILSSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFGKFNSIHMYDIVI

Query:  KNPNLFHVRDV
        KNPNLFHVRD+
Subjt:  KNPNLFHVRDV

XP_022132061.1 flowering-promoting factor 1-like [Momordica charantia]1.3e-5492.73Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLVYLPTGQPVSSYSSLEEILSSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFGKFNSIHMYDIVIK
        MSGVWVFKNG+IRLIENPQADSDGRLGNSRRKVL++LPTGQPVSSYSSLEEIL++LGWERYYGGDPDLFQFHKRSSIDLISLPRDF KFNS+HMYDIVIK
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLVYLPTGQPVSSYSSLEEILSSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFGKFNSIHMYDIVIK

Query:  NPNLFHVRDV
        NPNLFHVRD+
Subjt:  NPNLFHVRDV

XP_022950996.1 flowering-promoting factor 1-like protein 2 [Cucurbita moschata]9.6e-5595.45Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLVYLPTGQPVSSYSSLEEILSSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFGKFNSIHMYDIVIK
        MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVL+YLPTGQ VSSYSSLEEIL+SLGWERYYGGDP+LFQFHKRSSIDLISLPRDF KFNSIHMYDIVIK
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLVYLPTGQPVSSYSSLEEILSSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFGKFNSIHMYDIVIK

Query:  NPNLFHVRDV
        NPNLFHVRDV
Subjt:  NPNLFHVRDV

XP_023546289.1 flowering-promoting factor 1-like [Cucurbita pepo subsp. pepo]6.9e-5390.91Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLVYLPTGQPVSSYSSLEEILSSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFGKFNSIHMYDIVIK
        MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVL+YLPTGQ VSSYS L+EIL+SLGWERYYGGDP+LFQFHKRSSIDLISLP+D+ KFNS+HMYDIVIK
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLVYLPTGQPVSSYSSLEEILSSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFGKFNSIHMYDIVIK

Query:  NPNLFHVRDV
        NPNLFHVRDV
Subjt:  NPNLFHVRDV

TrEMBL top hitse value%identityAlignment
A0A0A0LPY7 Uncharacterized protein9.7e-5391.89Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRR-KVLVYLPTGQPVSSYSSLEEILSSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFGKFNSIHMYDIVI
        MSGVWVFKNGVIRLIENPQADSDGRLGNSRR KVL++LPTGQPV+SYSSLE IL+SLGWERYYGGDP+LFQFHKRSSIDLISLPRDF KFNSIHMYDIVI
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRR-KVLVYLPTGQPVSSYSSLEEILSSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFGKFNSIHMYDIVI

Query:  KNPNLFHVRDV
        KNPNLFHVRD+
Subjt:  KNPNLFHVRDV

A0A5A7VCS2 Flowering-promoting factor 19.7e-5391.89Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRR-KVLVYLPTGQPVSSYSSLEEILSSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFGKFNSIHMYDIVI
        MSGVWVFKNGVIRLIENPQADSDGRLGNSRR KVL++LPTGQPV+SYSSLE IL+SLGWERYYGGDP+LFQFHKRSSIDLISLPRDF KFNSIHMYDIVI
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRR-KVLVYLPTGQPVSSYSSLEEILSSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFGKFNSIHMYDIVI

Query:  KNPNLFHVRDV
        KNPNLFHVRD+
Subjt:  KNPNLFHVRDV

A0A6J1BR67 flowering-promoting factor 1-like6.1e-5592.73Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLVYLPTGQPVSSYSSLEEILSSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFGKFNSIHMYDIVIK
        MSGVWVFKNG+IRLIENPQADSDGRLGNSRRKVL++LPTGQPVSSYSSLEEIL++LGWERYYGGDPDLFQFHKRSSIDLISLPRDF KFNS+HMYDIVIK
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLVYLPTGQPVSSYSSLEEILSSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFGKFNSIHMYDIVIK

Query:  NPNLFHVRDV
        NPNLFHVRD+
Subjt:  NPNLFHVRDV

A0A6J1GGC5 flowering-promoting factor 1-like protein 24.6e-5595.45Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLVYLPTGQPVSSYSSLEEILSSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFGKFNSIHMYDIVIK
        MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVL+YLPTGQ VSSYSSLEEIL+SLGWERYYGGDP+LFQFHKRSSIDLISLPRDF KFNSIHMYDIVIK
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLVYLPTGQPVSSYSSLEEILSSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFGKFNSIHMYDIVIK

Query:  NPNLFHVRDV
        NPNLFHVRDV
Subjt:  NPNLFHVRDV

A0A6J1KTX8 flowering-promoting factor 1-like protein 24.6e-5595.45Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLVYLPTGQPVSSYSSLEEILSSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFGKFNSIHMYDIVIK
        MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVL+YLPTGQ VSSYSSLEEIL+SLGWERYYGGDP+LFQFHKRSSIDLISLPRDF KFNSIHMYDIVIK
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLVYLPTGQPVSSYSSLEEILSSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFGKFNSIHMYDIVIK

Query:  NPNLFHVRDV
        NPNLFHVRDV
Subjt:  NPNLFHVRDV

SwissProt top hitse value%identityAlignment
O23624 Flowering-promoting factor 13.0e-4377.48Show/hide
Query:  MSGVWVFKNGVIRLIENP-QADSDGRLGNSRRKVLVYLPTGQPVSSYSSLEEILSSLGWERYY-GGDPDLFQFHKRSSIDLISLPRDFGKFNSIHMYDIV
        MSGVWVFKNGVIRL+ENP Q+ SD +   +RRKV+VYLPTG+ VSSYS+LE+IL SLGWERY+ GGD DL QFHKRSSIDLISLPRDF KFNS++MYDIV
Subjt:  MSGVWVFKNGVIRLIENP-QADSDGRLGNSRRKVLVYLPTGQPVSSYSSLEEILSSLGWERYY-GGDPDLFQFHKRSSIDLISLPRDFGKFNSIHMYDIV

Query:  IKNPNLFHVRD
        +KNPN FHVRD
Subjt:  IKNPNLFHVRD

O24340 Flowering-promoting factor 18.8e-4375.45Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLVYLPTGQPVSSYSSLEEILSSLGWERYY-GGDPDLFQFHKRSSIDLISLPRDFGKFNSIHMYDIVI
        MSGVWVFKNGVIRL+ENP  +  G   NSRRKV+VYLPTG+ +SSYS+LE+IL SLGWERY+ GGD DL QFHKRSSIDLISLP+DF KF+S++MYDIV+
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLVYLPTGQPVSSYSSLEEILSSLGWERYY-GGDPDLFQFHKRSSIDLISLPRDFGKFNSIHMYDIVI

Query:  KNPNLFHVRD
        KNPN FHVRD
Subjt:  KNPNLFHVRD

Q5Q0B3 Flowering-promoting factor 1-like protein 12.2e-3865.32Show/hide
Query:  MSGVWVF-KNGVIRLIENPQADSDGRLGNS-----------RRKVLVYLPTGQPVSSYSSLEEILSSLGWERYYGGD--PDLFQFHKRSSIDLISLPRDF
        MSGVWVF KNGV+RL+ENP   S G    S           RRK+LV+LP+ + VSSY SLE+IL +LGWERYY GD    L QFHKR+SIDLISLPRDF
Subjt:  MSGVWVF-KNGVIRLIENPQADSDGRLGNS-----------RRKVLVYLPTGQPVSSYSSLEEILSSLGWERYYGGD--PDLFQFHKRSSIDLISLPRDF

Query:  GKFNSIHMYDIVIKNPNLFHVRDV
         KFNSIHMYDIV+KNPN+FHVRD+
Subjt:  GKFNSIHMYDIVIKNPNLFHVRDV

Q9LGE3 Flowering-promoting factor 1-like protein 11.5e-3463.3Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLVYLPTGQPVSSYSSLEEILSSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFGKFNSIHMYDIVIK
        MSGVWVFKNGV+RL+E  QA +   +   RRK LV+ P+GQ VSSY++LE  L++LGWERYY  DP LFQFHKR S+DLISLP DF  F+S+HMYDIV+K
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLVYLPTGQPVSSYSSLEEILSSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFGKFNSIHMYDIVIK

Query:  NPNLFHVRD
        N + F V D
Subjt:  NPNLFHVRD

Q9LXB5 Flowering-promoting factor 1-like protein 26.7e-4374.55Show/hide
Query:  MSGVWVFKNGVIRLIENP-QADSDGRLGNSRRKVLVYLPTGQPVSSYSSLEEILSSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFGKFNSIHMYDIVI
        MSGVWVF NGVIRL+ENP Q+       + RR VLVYLPTG+ VSSYSSLE+IL SLGWERY+ GD DL Q+HKRSSIDLISLPRDF KFNS++MYDIV+
Subjt:  MSGVWVFKNGVIRLIENP-QADSDGRLGNSRRKVLVYLPTGQPVSSYSSLEEILSSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFGKFNSIHMYDIVI

Query:  KNPNLFHVRD
        KNPN FHVRD
Subjt:  KNPNLFHVRD

Arabidopsis top hitse value%identityAlignment
AT4G31380.1 FPF1-like protein 11.6e-3965.32Show/hide
Query:  MSGVWVF-KNGVIRLIENPQADSDGRLGNS-----------RRKVLVYLPTGQPVSSYSSLEEILSSLGWERYYGGD--PDLFQFHKRSSIDLISLPRDF
        MSGVWVF KNGV+RL+ENP   S G    S           RRK+LV+LP+ + VSSY SLE+IL +LGWERYY GD    L QFHKR+SIDLISLPRDF
Subjt:  MSGVWVF-KNGVIRLIENPQADSDGRLGNS-----------RRKVLVYLPTGQPVSSYSSLEEILSSLGWERYYGGD--PDLFQFHKRSSIDLISLPRDF

Query:  GKFNSIHMYDIVIKNPNLFHVRDV
         KFNSIHMYDIV+KNPN+FHVRD+
Subjt:  GKFNSIHMYDIVIKNPNLFHVRDV

AT5G10625.1 BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1)4.8e-4474.55Show/hide
Query:  MSGVWVFKNGVIRLIENP-QADSDGRLGNSRRKVLVYLPTGQPVSSYSSLEEILSSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFGKFNSIHMYDIVI
        MSGVWVF NGVIRL+ENP Q+       + RR VLVYLPTG+ VSSYSSLE+IL SLGWERY+ GD DL Q+HKRSSIDLISLPRDF KFNS++MYDIV+
Subjt:  MSGVWVFKNGVIRLIENP-QADSDGRLGNSRRKVLVYLPTGQPVSSYSSLEEILSSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFGKFNSIHMYDIVI

Query:  KNPNLFHVRD
        KNPN FHVRD
Subjt:  KNPNLFHVRD

AT5G24860.1 flowering promoting factor 12.1e-4477.48Show/hide
Query:  MSGVWVFKNGVIRLIENP-QADSDGRLGNSRRKVLVYLPTGQPVSSYSSLEEILSSLGWERYY-GGDPDLFQFHKRSSIDLISLPRDFGKFNSIHMYDIV
        MSGVWVFKNGVIRL+ENP Q+ SD +   +RRKV+VYLPTG+ VSSYS+LE+IL SLGWERY+ GGD DL QFHKRSSIDLISLPRDF KFNS++MYDIV
Subjt:  MSGVWVFKNGVIRLIENP-QADSDGRLGNSRRKVLVYLPTGQPVSSYSSLEEILSSLGWERYY-GGDPDLFQFHKRSSIDLISLPRDFGKFNSIHMYDIV

Query:  IKNPNLFHVRD
        +KNPN FHVRD
Subjt:  IKNPNLFHVRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGGGGTTTGGGTTTTCAAGAACGGCGTAATTCGACTGATCGAAAATCCGCAAGCGGATTCGGATGGAAGGCTAGGCAACTCGAGGAGAAAGGTATTGGTGTACCT
TCCAACGGGTCAGCCCGTGTCGTCCTACTCCTCACTCGAGGAAATTCTCTCGTCGTTGGGATGGGAGAGGTATTATGGAGGCGATCCGGACCTGTTCCAGTTTCATAAAC
GCTCCTCCATTGACCTAATTTCTCTTCCCAGGGACTTCGGCAAGTTCAACTCCATTCACATGTACGACATAGTCATTAAAAATCCCAATCTCTTCCACGTCCGAGATGTG
TAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGGGGTTTGGGTTTTCAAGAACGGCGTAATTCGACTGATCGAAAATCCGCAAGCGGATTCGGATGGAAGGCTAGGCAACTCGAGGAGAAAGGTATTGGTGTACCT
TCCAACGGGTCAGCCCGTGTCGTCCTACTCCTCACTCGAGGAAATTCTCTCGTCGTTGGGATGGGAGAGGTATTATGGAGGCGATCCGGACCTGTTCCAGTTTCATAAAC
GCTCCTCCATTGACCTAATTTCTCTTCCCAGGGACTTCGGCAAGTTCAACTCCATTCACATGTACGACATAGTCATTAAAAATCCCAATCTCTTCCACGTCCGAGATGTG
TAA
Protein sequenceShow/hide protein sequence
MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLVYLPTGQPVSSYSSLEEILSSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFGKFNSIHMYDIVIKNPNLFHVRDV