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Sed0016829 (gene) of Chayote v1 genome

Gene IDSed0016829
OrganismSechium edule (Chayote v1)
DescriptionLOB domain-containing protein
Genome locationLG11:35276261..35277433
RNA-Seq ExpressionSed0016829
SyntenySed0016829
Gene Ontology termsNA
InterPro domainsIPR004883 - Lateral organ boundaries, LOB


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055025.1 LOB domain-containing protein 21-like [Cucumis melo var. makuwa]1.2e-5282.48Show/hide
Query:  SDEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARY--DNGSSSCSLGVLESCVV
        SDEPKKFAKVHKVFGASNVSKIL EVPEE RE+TVNSLAYEAE RLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARY  +N SSS S    E+CVV
Subjt:  SDEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARY--DNGSSSCSLGVLESCVV

Query:  NMSYDGVSFCGE--SSDIVSQYGYLCDFAHFPYPFKA
        NMSY G+SF  E  SSD ++QYGYLCDF HFPYPFKA
Subjt:  NMSYDGVSFCGE--SSDIVSQYGYLCDFAHFPYPFKA

KAG6602609.1 LOB domain-containing protein 21, partial [Cucurbita argyrosperma subsp. sororia]2.6e-5582.48Show/hide
Query:  SDEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARY----DNGSSSCSLGVLESC
        SDEPKKFAKVHKVFGASNVSKIL EVPEE RE+TVNSLAYEAE RLRDPVYGCIGAIALLQTK+ ELQHDLALAKARLARY    +N +SS SLGVLE+C
Subjt:  SDEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARY----DNGSSSCSLGVLESC

Query:  VVNMSYDGVSFCGESSDIVSQYGYLCDFAHFPYPFKA
        VVNMSY G+SF G+SSD +SQYG+LCDF HFPYPF+A
Subjt:  VVNMSYDGVSFCGESSDIVSQYGYLCDFAHFPYPFKA

XP_022953486.1 LOB domain-containing protein 21-like [Cucurbita moschata]1.2e-5583.21Show/hide
Query:  SDEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARY----DNGSSSCSLGVLESC
        SDEPKKFAKVHKVFGASNVSKIL EVPEE RE+TVNSLAYEAE RLRDPVYGCIGAIALLQTKM ELQHDLALAKARLARY    +N +SS SLGVLE+C
Subjt:  SDEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARY----DNGSSSCSLGVLESC

Query:  VVNMSYDGVSFCGESSDIVSQYGYLCDFAHFPYPFKA
        VVNMSY G+SF G+SSD +SQYG+LCDF HFPYPF+A
Subjt:  VVNMSYDGVSFCGESSDIVSQYGYLCDFAHFPYPFKA

XP_022990592.1 LOB domain-containing protein 21-like [Cucurbita maxima]2.0e-5581.12Show/hide
Query:  SDEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARY----------DNGSSSCSL
        SDEPKKFAKVHKVFGASNVSKIL EVPEE RE+TVNSLAYEAE RLRDPVYGCIGAIALLQTKM ELQHDLALAKARLARY           + SSS SL
Subjt:  SDEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARY----------DNGSSSCSL

Query:  GVLESCVVNMSYDGVSFCGESSDIVSQYGYLCDFAHFPYPFKA
        GVLESCVVNMSY G+SF G+SSD +SQYGYLCDF HFPYPF+A
Subjt:  GVLESCVVNMSYDGVSFCGESSDIVSQYGYLCDFAHFPYPFKA

XP_023521654.1 LOB domain-containing protein 21-like isoform X1 [Cucurbita pepo subsp. pepo]4.0e-5684.67Show/hide
Query:  SDEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARY----DNGSSSCSLGVLESC
        SDEPKKFAKVHKVFGASNVSKIL EVPEE RE+TVNSLAYEAE RLRDPVYGCIGAIALLQTKM ELQHDLALAKARLARY    +N SSS SLGVLE+C
Subjt:  SDEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARY----DNGSSSCSLGVLESC

Query:  VVNMSYDGVSFCGESSDIVSQYGYLCDFAHFPYPFKA
        VVNMSY G+SF G+SSD +SQYGYLCDF HFPYPF+A
Subjt:  VVNMSYDGVSFCGESSDIVSQYGYLCDFAHFPYPFKA

TrEMBL top hitse value%identityAlignment
A0A0A0KAD8 LOB domain-containing protein4.5e-5381.29Show/hide
Query:  VSDEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYDN---GSSSCSLGVLESC
        +SDEPKKFAKVHKVFGASNVSKIL EVPEE RE+TVNSLAYEAE RLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARY N    SSS S   +E+C
Subjt:  VSDEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYDN---GSSSCSLGVLESC

Query:  VVNMSYDGVSFCGE--SSDIVSQYGYLCDFAHFPYPFKA
        VVNMSY G+SF  E  SSD ++QYGYLCDF HFPYPFKA
Subjt:  VVNMSYDGVSFCGE--SSDIVSQYGYLCDFAHFPYPFKA

A0A1S3B334 LOB domain-containing protein 21-like2.2e-5281.16Show/hide
Query:  SDEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARY---DNGSSSCSLGVLESCV
        SDEPKKFAKVHKVFGASNVSKIL EVPEE RE+TVNSLAYEAE RLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARY   +  SSS S    E+CV
Subjt:  SDEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARY---DNGSSSCSLGVLESCV

Query:  VNMSYDGVSFCGE--SSDIVSQYGYLCDFAHFPYPFKA
        VNMSY G+SF  E  SSD ++QYGYLCDF HFPYPFKA
Subjt:  VNMSYDGVSFCGE--SSDIVSQYGYLCDFAHFPYPFKA

A0A5A7UN14 LOB domain-containing protein 21-like5.8e-5382.48Show/hide
Query:  SDEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARY--DNGSSSCSLGVLESCVV
        SDEPKKFAKVHKVFGASNVSKIL EVPEE RE+TVNSLAYEAE RLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARY  +N SSS S    E+CVV
Subjt:  SDEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARY--DNGSSSCSLGVLESCVV

Query:  NMSYDGVSFCGE--SSDIVSQYGYLCDFAHFPYPFKA
        NMSY G+SF  E  SSD ++QYGYLCDF HFPYPFKA
Subjt:  NMSYDGVSFCGE--SSDIVSQYGYLCDFAHFPYPFKA

A0A6J1GN41 LOB domain-containing protein 21-like5.6e-5683.21Show/hide
Query:  SDEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARY----DNGSSSCSLGVLESC
        SDEPKKFAKVHKVFGASNVSKIL EVPEE RE+TVNSLAYEAE RLRDPVYGCIGAIALLQTKM ELQHDLALAKARLARY    +N +SS SLGVLE+C
Subjt:  SDEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARY----DNGSSSCSLGVLESC

Query:  VVNMSYDGVSFCGESSDIVSQYGYLCDFAHFPYPFKA
        VVNMSY G+SF G+SSD +SQYG+LCDF HFPYPF+A
Subjt:  VVNMSYDGVSFCGESSDIVSQYGYLCDFAHFPYPFKA

A0A6J1JJ75 LOB domain-containing protein 21-like9.6e-5681.12Show/hide
Query:  SDEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARY----------DNGSSSCSL
        SDEPKKFAKVHKVFGASNVSKIL EVPEE RE+TVNSLAYEAE RLRDPVYGCIGAIALLQTKM ELQHDLALAKARLARY           + SSS SL
Subjt:  SDEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARY----------DNGSSSCSL

Query:  GVLESCVVNMSYDGVSFCGESSDIVSQYGYLCDFAHFPYPFKA
        GVLESCVVNMSY G+SF G+SSD +SQYGYLCDF HFPYPF+A
Subjt:  GVLESCVVNMSYDGVSFCGESSDIVSQYGYLCDFAHFPYPFKA

SwissProt top hitse value%identityAlignment
O04479 Protein ASYMMETRIC LEAVES 26.0e-2358.7Show/hide
Query:  DEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYDNGSSSCSLGVL
        D+P+KFA VHKVFGASNV+K+L E+    RE+ VNSLAYEA++RLRDPVYGC+G I+LLQ ++ +LQ DL+ AK+ L++Y       SLG+L
Subjt:  DEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYDNGSSSCSLGVL

Q32SG3 LOB domain-containing protein 65.7e-2155.81Show/hide
Query:  DEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYDNGSSS
        D P+KF  VH+VFGASNV+K+L E+    RE+ VNSLAYEA++RLRDPVYGC+G I++LQ  + +LQ DLA AK  L++Y   +++
Subjt:  DEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYDNGSSS

Q8L8Q3 LOB domain-containing protein 251.5e-2162.5Show/hide
Query:  DEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARY
        +EP KFA VH++FGASNVSKIL EV    RE+ VNSLAYEAE RL+DPVYGC+GAI++LQ +++ LQ +L    A L RY
Subjt:  DEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARY

Q9FKZ3 LOB domain-containing protein 361.9e-2161.25Show/hide
Query:  DEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARY
        D+P+KFA VHKVFGASNV+K+L E+    RE+ VNSL YEAE RLRDPVYGC+G I++LQ ++ ++ HDL  AK  LA Y
Subjt:  DEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARY

Q9SRL8 LOB domain-containing protein 218.1e-2876.54Show/hide
Query:  FAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYDNGSSS
        FAKVHKVFGASNVSK+L EVPEE R+ETVNSLAYEAEVRL+DPVYGCIGAIA LQ KM+ELQHDLA+A+ RL  +   ++S
Subjt:  FAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYDNGSSS

Arabidopsis top hitse value%identityAlignment
AT1G65620.1 Lateral organ boundaries (LOB) domain family protein4.3e-2458.7Show/hide
Query:  DEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYDNGSSSCSLGVL
        D+P+KFA VHKVFGASNV+K+L E+    RE+ VNSLAYEA++RLRDPVYGC+G I+LLQ ++ +LQ DL+ AK+ L++Y       SLG+L
Subjt:  DEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYDNGSSSCSLGVL

AT1G65620.2 Lateral organ boundaries (LOB) domain family protein4.3e-2458.7Show/hide
Query:  DEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYDNGSSSCSLGVL
        D+P+KFA VHKVFGASNV+K+L E+    RE+ VNSLAYEA++RLRDPVYGC+G I+LLQ ++ +LQ DL+ AK+ L++Y       SLG+L
Subjt:  DEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYDNGSSSCSLGVL

AT1G65620.3 Lateral organ boundaries (LOB) domain family protein4.3e-2458.7Show/hide
Query:  DEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYDNGSSSCSLGVL
        D+P+KFA VHKVFGASNV+K+L E+    RE+ VNSLAYEA++RLRDPVYGC+G I+LLQ ++ +LQ DL+ AK+ L++Y       SLG+L
Subjt:  DEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYDNGSSSCSLGVL

AT1G65620.4 Lateral organ boundaries (LOB) domain family protein4.3e-2458.7Show/hide
Query:  DEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYDNGSSSCSLGVL
        D+P+KFA VHKVFGASNV+K+L E+    RE+ VNSLAYEA++RLRDPVYGC+G I+LLQ ++ +LQ DL+ AK+ L++Y       SLG+L
Subjt:  DEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYDNGSSSCSLGVL

AT3G11090.1 LOB domain-containing protein 215.8e-2976.54Show/hide
Query:  FAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYDNGSSS
        FAKVHKVFGASNVSK+L EVPEE R+ETVNSLAYEAEVRL+DPVYGCIGAIA LQ KM+ELQHDLA+A+ RL  +   ++S
Subjt:  FAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYDNGSSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTTAATTCCCACCTTCTGCAATATCAATTGAAAGTGTCTGATGAGCCTAAGAAATTCGCCAAAGTTCACAAAGTTTTTGGGGCCAGTAATGTCAGCAAGATTCT
GGCTGAGGTTCCTGAAGAACATAGAGAGGAAACTGTGAATTCTTTGGCTTACGAGGCGGAGGTCAGGCTACGAGATCCGGTTTACGGCTGCATCGGTGCCATCGCTTTGT
TGCAGACTAAAATGGTGGAGCTTCAACATGATCTTGCTCTTGCGAAAGCTCGACTCGCTCGTTATGATAACGGCTCTTCTTCTTGTTCTTTGGGTGTTTTGGAAAGTTGT
GTGGTTAATATGTCTTATGATGGAGTGAGTTTCTGTGGGGAGAGTTCTGATATTGTCTCCCAATATGGATATTTATGTGACTTTGCCCATTTTCCTTATCCATTTAAAGC
TTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTTAATTCCCACCTTCTGCAATATCAATTGAAAGTGTCTGATGAGCCTAAGAAATTCGCCAAAGTTCACAAAGTTTTTGGGGCCAGTAATGTCAGCAAGATTCT
GGCTGAGGTTCCTGAAGAACATAGAGAGGAAACTGTGAATTCTTTGGCTTACGAGGCGGAGGTCAGGCTACGAGATCCGGTTTACGGCTGCATCGGTGCCATCGCTTTGT
TGCAGACTAAAATGGTGGAGCTTCAACATGATCTTGCTCTTGCGAAAGCTCGACTCGCTCGTTATGATAACGGCTCTTCTTCTTGTTCTTTGGGTGTTTTGGAAAGTTGT
GTGGTTAATATGTCTTATGATGGAGTGAGTTTCTGTGGGGAGAGTTCTGATATTGTCTCCCAATATGGATATTTATGTGACTTTGCCCATTTTCCTTATCCATTTAAAGC
TTGA
Protein sequenceShow/hide protein sequence
MFFNSHLLQYQLKVSDEPKKFAKVHKVFGASNVSKILAEVPEEHREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYDNGSSSCSLGVLESC
VVNMSYDGVSFCGESSDIVSQYGYLCDFAHFPYPFKA