; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0016844 (gene) of Chayote v1 genome

Gene IDSed0016844
OrganismSechium edule (Chayote v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationLG06:21558696..21559913
RNA-Seq ExpressionSed0016844
SyntenySed0016844
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031737045.1 uncharacterized protein LOC116402134 [Cucumis sativus]7.5e-11357.8Show/hide
Query:  MPKVTLKQLRISMEELSDSKLLIQGFNQGGQRAIGMIRLEVIIGKLSADALFHVIDCKTTYRLLLGRPWIHENRVVTSSLHQCFKFYQDGVKKVEADTNP
        MPK T+ QL I M+ELS+SKL+IQGFNQG QRAIG+IRLE+IIG L A ALFHVID +TTY+LLLGRPWIH N VVTS+LHQCFKFYQDGVKKVEAD+NP
Subjt:  MPKVTLKQLRISMEELSDSKLLIQGFNQGGQRAIGMIRLEVIIGKLSADALFHVIDCKTTYRLLLGRPWIHENRVVTSSLHQCFKFYQDGVKKVEADTNP

Query:  FLEAESHFADAKFYAKNETVEKIVPHEVPAIKESEKAKLKPEADIKKKWVVRKEKSCPVKIEASTSLVAPKALKHEKLPTSPILRYVPISRRKKGKAPFT
        F EAESHFADAKFY+KN  + +++P E P  K  + ++LK  A  +     R   S   K EA TS      LK E    +P+LRYVP+SRRKKG++PF 
Subjt:  FLEAESHFADAKFYAKNETVEKIVPHEVPAIKESEKAKLKPEADIKKKWVVRKEKSCPVKIEASTSLVAPKALKHEKLPTSPILRYVPISRRKKGKAPFT

Query:  ECSKKLKVGDIQVLRESFTTPLTKMKKQWSQRSEGDEKNVALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGYALPT
        E  K LKVGDI++++ESFTTPLTK+ K   Q  + D     LP++RTKDGFDP AY+L+AKAGYDFT HTEFK L I  D+ ELSSTQKKLL++G+++P 
Subjt:  ECSKKLKVGDIQVLRESFTTPLTKMKKQWSQRSEGDEKNVALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGYALPT

Query:  SRKGLGYKSPEPVRITRREKAKVEDANHITIEEVEESKENKNVGHRVPAFKRIGPSTSRVSAFQRLGTSKRKENKMPATTNKTQLPIFERL
        SRKGLGYKSPEP+RIT++ K KV D NHITIEE + +   +    R+  F RI PS +R   F+RL  ++ +  ++ +  N  +  +F RL
Subjt:  SRKGLGYKSPEPVRITRREKAKVEDANHITIEEVEESKENKNVGHRVPAFKRIGPSTSRVSAFQRLGTSKRKENKMPATTNKTQLPIFERL

XP_031737372.1 uncharacterized protein LOC116402244 [Cucumis sativus]2.6e-11358.06Show/hide
Query:  MPKVTLKQLRISMEELSDSKLLIQGFNQGGQRAIGMIRLEVIIGKLSADALFHVIDCKTTYRLLLGRPWIHENRVVTSSLHQCFKFYQDGVKKVEADTNP
        MPK T+ QL I M+ELS+SKL+IQGFNQG QRAIGMIRLE+IIG L A ALFHVID +TTY+LLLGRPWIH N VVTS+LHQCFKFYQDGVKKVEAD+NP
Subjt:  MPKVTLKQLRISMEELSDSKLLIQGFNQGGQRAIGMIRLEVIIGKLSADALFHVIDCKTTYRLLLGRPWIHENRVVTSSLHQCFKFYQDGVKKVEADTNP

Query:  FLEAESHFADAKFYAKNETVEKIVPHEVPAIKESEKAKLKPEADIKKKWVVRKEKSCPVKIEASTSLVAPKALKHEKLPTSPILRYVPISRRKKGKAPFT
        F EAESHFADAKFY+KN  + +++P E P  K  + ++LK  A  +     R   S   K EA TS      LK E    +P+LRYVP+SRRKKG++PF 
Subjt:  FLEAESHFADAKFYAKNETVEKIVPHEVPAIKESEKAKLKPEADIKKKWVVRKEKSCPVKIEASTSLVAPKALKHEKLPTSPILRYVPISRRKKGKAPFT

Query:  ECSKKLKVGDIQVLRESFTTPLTKMKKQWSQRSEGDEKNVALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGYALPT
        E  K LKVGDI++++ESFTTPLTK+ K   Q  + D     LP++RTKDGFDP AY+L+AKAGYDFT HTEFK L I  D+ ELSSTQKKLL++G+++P 
Subjt:  ECSKKLKVGDIQVLRESFTTPLTKMKKQWSQRSEGDEKNVALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGYALPT

Query:  SRKGLGYKSPEPVRITRREKAKVEDANHITIEEVEESKENKNVGHRVPAFKRIGPSTSRVSAFQRLGTSKRKENKMPATTNKTQLPIFERL
        SRKGLGYKSPEP+RIT++ K KV D NHITIEE + +   +    R+  F RI PS +R   F+RL  ++ +  ++ +  N  +  +F RL
Subjt:  SRKGLGYKSPEPVRITRREKAKVEDANHITIEEVEESKENKNVGHRVPAFKRIGPSTSRVSAFQRLGTSKRKENKMPATTNKTQLPIFERL

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]2.6e-11358.06Show/hide
Query:  MPKVTLKQLRISMEELSDSKLLIQGFNQGGQRAIGMIRLEVIIGKLSADALFHVIDCKTTYRLLLGRPWIHENRVVTSSLHQCFKFYQDGVKKVEADTNP
        MPK T+ QL I M+ELS+SKL+IQGFNQG QRAIGMIRLE+IIG L A ALFHVID +TTY+LLLGRPWIH N VVTS+LHQCFKFYQDGVKKVEAD+NP
Subjt:  MPKVTLKQLRISMEELSDSKLLIQGFNQGGQRAIGMIRLEVIIGKLSADALFHVIDCKTTYRLLLGRPWIHENRVVTSSLHQCFKFYQDGVKKVEADTNP

Query:  FLEAESHFADAKFYAKNETVEKIVPHEVPAIKESEKAKLKPEADIKKKWVVRKEKSCPVKIEASTSLVAPKALKHEKLPTSPILRYVPISRRKKGKAPFT
        F EAESHFADAKFY+KN  + +++P E P  K  + ++LK  A  +     R   S   K EA TS      LK E    +P+LRYVP+SRRKKG++PF 
Subjt:  FLEAESHFADAKFYAKNETVEKIVPHEVPAIKESEKAKLKPEADIKKKWVVRKEKSCPVKIEASTSLVAPKALKHEKLPTSPILRYVPISRRKKGKAPFT

Query:  ECSKKLKVGDIQVLRESFTTPLTKMKKQWSQRSEGDEKNVALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGYALPT
        E  K LKVGDI++++ESFTTPLTK+ K   Q  + D     LP++RTKDGFDP AY+L+AKAGYDFT HTEFK L I  D+ ELSSTQKKLL++G+++P 
Subjt:  ECSKKLKVGDIQVLRESFTTPLTKMKKQWSQRSEGDEKNVALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGYALPT

Query:  SRKGLGYKSPEPVRITRREKAKVEDANHITIEEVEESKENKNVGHRVPAFKRIGPSTSRVSAFQRLGTSKRKENKMPATTNKTQLPIFERL
        SRKGLGYKSPEP+RIT++ K KV D NHITIEE + +   +    R+  F RI PS +R   F+RL  ++ +  ++ +  N  +  +F RL
Subjt:  SRKGLGYKSPEPVRITRREKAKVEDANHITIEEVEESKENKNVGHRVPAFKRIGPSTSRVSAFQRLGTSKRKENKMPATTNKTQLPIFERL

XP_031740568.1 uncharacterized protein LOC116403508 [Cucumis sativus]2.6e-11358.06Show/hide
Query:  MPKVTLKQLRISMEELSDSKLLIQGFNQGGQRAIGMIRLEVIIGKLSADALFHVIDCKTTYRLLLGRPWIHENRVVTSSLHQCFKFYQDGVKKVEADTNP
        MPK T+ QL I M+ELS+SKL+IQGFNQG QRAIGMIRLE+IIG L A ALFHVID +TTY+LLLGRPWIH N VVTS+LHQCFKFYQDGVKKVEAD+NP
Subjt:  MPKVTLKQLRISMEELSDSKLLIQGFNQGGQRAIGMIRLEVIIGKLSADALFHVIDCKTTYRLLLGRPWIHENRVVTSSLHQCFKFYQDGVKKVEADTNP

Query:  FLEAESHFADAKFYAKNETVEKIVPHEVPAIKESEKAKLKPEADIKKKWVVRKEKSCPVKIEASTSLVAPKALKHEKLPTSPILRYVPISRRKKGKAPFT
        F EAESHFADAKFY+KN  + +++P E P  K  + ++LK  A  +     R   S   K EA TS      LK E    +P+LRYVP+SRRKKG++PF 
Subjt:  FLEAESHFADAKFYAKNETVEKIVPHEVPAIKESEKAKLKPEADIKKKWVVRKEKSCPVKIEASTSLVAPKALKHEKLPTSPILRYVPISRRKKGKAPFT

Query:  ECSKKLKVGDIQVLRESFTTPLTKMKKQWSQRSEGDEKNVALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGYALPT
        E  K LKVGDI++++ESFTTPLTK+ K   Q  + D     LP++RTKDGFDP AY+L+AKAGYDFT HTEFK L I  D+ ELSSTQKKLL++G+++P 
Subjt:  ECSKKLKVGDIQVLRESFTTPLTKMKKQWSQRSEGDEKNVALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGYALPT

Query:  SRKGLGYKSPEPVRITRREKAKVEDANHITIEEVEESKENKNVGHRVPAFKRIGPSTSRVSAFQRLGTSKRKENKMPATTNKTQLPIFERL
        SRKGLGYKSPEP+RIT++ K KV D NHITIEE + +   +    R+  F RI PS +R   F+RL  ++ +  ++ +  N  +  +F RL
Subjt:  SRKGLGYKSPEPVRITRREKAKVEDANHITIEEVEESKENKNVGHRVPAFKRIGPSTSRVSAFQRLGTSKRKENKMPATTNKTQLPIFERL

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]3.4e-11358.06Show/hide
Query:  MPKVTLKQLRISMEELSDSKLLIQGFNQGGQRAIGMIRLEVIIGKLSADALFHVIDCKTTYRLLLGRPWIHENRVVTSSLHQCFKFYQDGVKKVEADTNP
        MPK T+ QL I M+ELS+SKL+IQGFNQG QRAIGMIRLE+IIG L A ALFHVID +TTY+LLLGRPWIH N VVTS+LHQCFKFYQDGVKKVEAD+NP
Subjt:  MPKVTLKQLRISMEELSDSKLLIQGFNQGGQRAIGMIRLEVIIGKLSADALFHVIDCKTTYRLLLGRPWIHENRVVTSSLHQCFKFYQDGVKKVEADTNP

Query:  FLEAESHFADAKFYAKNETVEKIVPHEVPAIKESEKAKLKPEADIKKKWVVRKEKSCPVKIEASTSLVAPKALKHEKLPTSPILRYVPISRRKKGKAPFT
        F EAESHFADAKFY+KN  + +++P E P  K  + ++LK  A  +     R   S   K EA TS      LK E    +P+LRYVP+SRRKKG++PF 
Subjt:  FLEAESHFADAKFYAKNETVEKIVPHEVPAIKESEKAKLKPEADIKKKWVVRKEKSCPVKIEASTSLVAPKALKHEKLPTSPILRYVPISRRKKGKAPFT

Query:  ECSKKLKVGDIQVLRESFTTPLTKMKKQWSQRSEGDEKNVALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGYALPT
        E  K LKVGDI++++ESFTTPLTK+ K   Q  + D     LP++RTKDGFDP AY+L+AKAGYDFT HTEFK L I  D+ ELSSTQKKLL++G+++P 
Subjt:  ECSKKLKVGDIQVLRESFTTPLTKMKKQWSQRSEGDEKNVALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGYALPT

Query:  SRKGLGYKSPEPVRITRREKAKVEDANHITIEEVEESKENKNVGHRVPAFKRIGPSTSRVSAFQRLGTSKRKENKMPATTNKTQLPIFERL
        SRKGLGYKSPEP+RIT++ K KV D NHITIEE + +   +    R+  F RI PS +R   F+RL  ++ +  ++ +  N  +  +F RL
Subjt:  SRKGLGYKSPEPVRITRREKAKVEDANHITIEEVEESKENKNVGHRVPAFKRIGPSTSRVSAFQRLGTSKRKENKMPATTNKTQLPIFERL

TrEMBL top hitse value%identityAlignment
A0A5A7TZU9 Ribonuclease H9.2e-10952.58Show/hide
Query:  MPKVTLKQLRISMEELSDSKLLIQGFNQGGQRAIGMIRLEVIIGKLSADALFHVIDCKTTYRLLLGRPWIHENRVVTSSLHQCFKFYQDGVKKVEADTNP
        +PK T+ QL IS+EELS+SKL+IQGFNQG QRAIG +RLEV+IG L A  +FHVID +TTY++LLGRPWIHEN +VTS+LHQCFKFY+ G+KKV+AD+ P
Subjt:  MPKVTLKQLRISMEELSDSKLLIQGFNQGGQRAIGMIRLEVIIGKLSADALFHVIDCKTTYRLLLGRPWIHENRVVTSSLHQCFKFYQDGVKKVEADTNP

Query:  FLEAESHFADAKFYAKNETVEKIVPHEVPAIKESEKAKLKPEADIKKKWVVRKEKSCPVKIEASTSLVAPKALK----HEKLPTSPILRYVPISRRKKGK
        F +AESHFADAKFY K+E V +I+  EVP  K + K + +     K             ++   T L AP+A K     +++   P+LRY+P+SRRKKG+
Subjt:  FLEAESHFADAKFYAKNETVEKIVPHEVPAIKESEKAKLKPEADIKKKWVVRKEKSCPVKIEASTSLVAPKALK----HEKLPTSPILRYVPISRRKKGK

Query:  APFTECSKKLKVGDIQVLRESFTTPLTKMKKQWSQRSEGDEKNVALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGY
        +PFTECSK L V + ++L+E+FT PLTK++K  +++ E  +    LPE+RT +GFDP AY+L+AKAGYDFTT TE K + IFD++ ELS TQKKL K+GY
Subjt:  APFTECSKKLKVGDIQVLRESFTTPLTKMKKQWSQRSEGDEKNVALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGY

Query:  ALPTSRKGLGYKSPEPVRITRREKAKVEDANHITIEEVEESKENKNV-GHRVPAFKRIGPSTSRVSAFQRLGTSKRKENKMPATTNKTQLPIFERLNKAM
        ++P SR G+GY+S EPVRIT + KAKV +  HIT+EE ++S+E K V   R   F RI  S  R S FQR+ TS  K++   +T + T+L  F+RLN + 
Subjt:  ALPTSRKGLGYKSPEPVRITRREKAKVEDANHITIEEVEESKENKNV-GHRVPAFKRIGPSTSRVSAFQRLGTSKRKENKMPATTNKTQLPIFERLNKAM

Query:  GEARTFS
         + R+ S
Subjt:  GEARTFS

A0A5A7UD46 Uncharacterized protein3.1e-11256.64Show/hide
Query:  MPKVTLKQLRISMEELSDSKLLIQGFNQGGQRAIGMIRLEVIIGKLSADALFHVIDCKTTYRLLLGRPWIHENRVVTSSLHQCFKFYQDGVKKVEADTNP
        MPK T++QL I MEELS+SKL+IQGFNQG QR IGMIRLE+IIG L   ALFHVID +TTY+LLLGRPWIH N VVTS+LHQCFKFYQDGVKKVEAD+NP
Subjt:  MPKVTLKQLRISMEELSDSKLLIQGFNQGGQRAIGMIRLEVIIGKLSADALFHVIDCKTTYRLLLGRPWIHENRVVTSSLHQCFKFYQDGVKKVEADTNP

Query:  FLEAESHFADAKFYAKNETVEKIVPHEVPAIKESEKAKLKPEADIKKKWVVRKEKSCPVKIEASTSLVAPKALKHEKLPTSPILRYVPISRRKKGKAPFT
        F EAESHFADAKFY KN++  ++V  EV  +   +  +LK  A  +    +    S   K EAST+      L  EK    PILRYVP+SRRKKG++PF 
Subjt:  FLEAESHFADAKFYAKNETVEKIVPHEVPAIKESEKAKLKPEADIKKKWVVRKEKSCPVKIEASTSLVAPKALKHEKLPTSPILRYVPISRRKKGKAPFT

Query:  ECSKKLKVGDIQVLRESFTTPLTKMKKQWSQRSEGDEKNVALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGYALPT
        E  + LKVG+I+VL+ESFTTPLTK+ K   Q  + D    +LP++RTKDGFDP AY+L+AKAGYDFTTHTEFK L I+ +Q +LSSTQKKLL++G+ +P 
Subjt:  ECSKKLKVGDIQVLRESFTTPLTKMKKQWSQRSEGDEKNVALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGYALPT

Query:  SRKGLGYKSPEPVRITRREKAKVEDANHITIEEVEESKENKNVGHRVPAFKRIGPSTSRVSAFQRLGTSKRKENKMPATTNKTQLPIFERLNKAMGEAR
        SRKGLGYKSPEP+RITR+ K KV D+NHIT++E +  +E +    R  AF RI P  +R   F++L  ++ +     +T+N  +   F+RL     E +
Subjt:  SRKGLGYKSPEPVRITRREKAKVEDANHITIEEVEESKENKNVGHRVPAFKRIGPSTSRVSAFQRLGTSKRKENKMPATTNKTQLPIFERLNKAMGEAR

A0A5A7UEC9 Uncharacterized protein1.6e-10858.51Show/hide
Query:  MPKVTLKQLRISMEELSDSKLLIQGFNQGGQRAIGMIRLEVIIGKLSADALFHVIDCKTTYRLLLGRPWIHENRVVTSSLHQCFKFYQDGVKKVEADTNP
        MPK T++Q  I MEEL +SKL+IQGFNQG QR IG+IRLE+IIG L A ALFHVI+ +TTY+LLLGRPWIH N VVTS+LH CFKFYQDGVKKVE D+NP
Subjt:  MPKVTLKQLRISMEELSDSKLLIQGFNQGGQRAIGMIRLEVIIGKLSADALFHVIDCKTTYRLLLGRPWIHENRVVTSSLHQCFKFYQDGVKKVEADTNP

Query:  FLEAESHFADAKFYAKNETVEKIVPHEVPAIKESEKAKLKPEADIKKKWVVRKEKSCPVKIEASTSLVAPKALKHEKLPTSPILRYVPISRRKKGKAPFT
        F EAESHFADAKFY KN++  + V  EVP +   +  +LK  A  +    +    S   K E STS      L  EK    PILRYVP+SRRKKG++PF 
Subjt:  FLEAESHFADAKFYAKNETVEKIVPHEVPAIKESEKAKLKPEADIKKKWVVRKEKSCPVKIEASTSLVAPKALKHEKLPTSPILRYVPISRRKKGKAPFT

Query:  ECSKKLKVGDIQVLRESFTTPLTKMKKQWSQRSEGDEKNVALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGYALPT
        E  + LKVGDI+VL+ESFTTPLTK+ K   +  + D    +LP++RTKDGFDP AY+L+AKAGYDF THTEFK L I  +Q +LSSTQKKLL++G+A+P 
Subjt:  ECSKKLKVGDIQVLRESFTTPLTKMKKQWSQRSEGDEKNVALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGYALPT

Query:  SRKGLGYKSPEPVRITRREKAKVEDANHITIEEVEESKENKNVGHRVPAFKRIGPSTSRVSAFQRLGT--SKRKEN
        SRKGLGYKSPEP+RITR+ K KV D+NHIT++EV+  +E ++   R  AF RI P  +R   F+RL    ++RK++
Subjt:  SRKGLGYKSPEPVRITRREKAKVEDANHITIEEVEESKENKNVGHRVPAFKRIGPSTSRVSAFQRLGT--SKRKEN

A0A5D3BIH8 Uncharacterized protein9.2e-10952.58Show/hide
Query:  MPKVTLKQLRISMEELSDSKLLIQGFNQGGQRAIGMIRLEVIIGKLSADALFHVIDCKTTYRLLLGRPWIHENRVVTSSLHQCFKFYQDGVKKVEADTNP
        +PK T+ QL IS+EELS+SKL+IQGFNQG QRAIG +RLEV+IG L A  +FHVID +TTY++LLGRPWIHEN +VTS+LHQCFKFY+ G+KKV+AD+ P
Subjt:  MPKVTLKQLRISMEELSDSKLLIQGFNQGGQRAIGMIRLEVIIGKLSADALFHVIDCKTTYRLLLGRPWIHENRVVTSSLHQCFKFYQDGVKKVEADTNP

Query:  FLEAESHFADAKFYAKNETVEKIVPHEVPAIKESEKAKLKPEADIKKKWVVRKEKSCPVKIEASTSLVAPKALK----HEKLPTSPILRYVPISRRKKGK
        F +AESHFADAKFY K+E V +I+  EVP  K + K + +     K             ++   T L AP+A K     +++   P+LRY+P+SRRKKG+
Subjt:  FLEAESHFADAKFYAKNETVEKIVPHEVPAIKESEKAKLKPEADIKKKWVVRKEKSCPVKIEASTSLVAPKALK----HEKLPTSPILRYVPISRRKKGK

Query:  APFTECSKKLKVGDIQVLRESFTTPLTKMKKQWSQRSEGDEKNVALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGY
        +PFTECSK L V + ++L+E+FT PLTK++K  +++ E  +    LPE+RT +GFDP AY+L+AKAGYDFTT TE K + IFD++ ELS TQKKL K+GY
Subjt:  APFTECSKKLKVGDIQVLRESFTTPLTKMKKQWSQRSEGDEKNVALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGY

Query:  ALPTSRKGLGYKSPEPVRITRREKAKVEDANHITIEEVEESKENKNV-GHRVPAFKRIGPSTSRVSAFQRLGTSKRKENKMPATTNKTQLPIFERLNKAM
        ++P SR G+GY+S EPVRIT + KAKV +  HIT+EE ++S+E K V   R   F RI  S  R S FQR+ TS  K++   +T + T+L  F+RLN + 
Subjt:  ALPTSRKGLGYKSPEPVRITRREKAKVEDANHITIEEVEESKENKNV-GHRVPAFKRIGPSTSRVSAFQRLGTSKRKENKMPATTNKTQLPIFERLNKAM

Query:  GEARTFS
         + R+ S
Subjt:  GEARTFS

A0A5D3D1E5 Ribonuclease H9.2e-10952.58Show/hide
Query:  MPKVTLKQLRISMEELSDSKLLIQGFNQGGQRAIGMIRLEVIIGKLSADALFHVIDCKTTYRLLLGRPWIHENRVVTSSLHQCFKFYQDGVKKVEADTNP
        +PK T+ QL IS+EELS+SKL+IQGFNQG QRAIG +RLEV+IG L A  +FHVID +TTY++LLGRPWIHEN +VTS+LHQCFKFY+ G+KKV+AD+ P
Subjt:  MPKVTLKQLRISMEELSDSKLLIQGFNQGGQRAIGMIRLEVIIGKLSADALFHVIDCKTTYRLLLGRPWIHENRVVTSSLHQCFKFYQDGVKKVEADTNP

Query:  FLEAESHFADAKFYAKNETVEKIVPHEVPAIKESEKAKLKPEADIKKKWVVRKEKSCPVKIEASTSLVAPKALK----HEKLPTSPILRYVPISRRKKGK
        F +AESHFADAKFY K+E V +I+  EVP  K + K + +     K             ++   T L AP+A K     +++   P+LRY+P+SRRKKG+
Subjt:  FLEAESHFADAKFYAKNETVEKIVPHEVPAIKESEKAKLKPEADIKKKWVVRKEKSCPVKIEASTSLVAPKALK----HEKLPTSPILRYVPISRRKKGK

Query:  APFTECSKKLKVGDIQVLRESFTTPLTKMKKQWSQRSEGDEKNVALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGY
        +PFTECSK L V + ++L+E+FT PLTK++K  +++ E  +    LPE+RT +GFDP AY+L+AKAGYDFTT TE K + IFD++ ELS TQKKL K+GY
Subjt:  APFTECSKKLKVGDIQVLRESFTTPLTKMKKQWSQRSEGDEKNVALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGY

Query:  ALPTSRKGLGYKSPEPVRITRREKAKVEDANHITIEEVEESKENKNV-GHRVPAFKRIGPSTSRVSAFQRLGTSKRKENKMPATTNKTQLPIFERLNKAM
        ++P SR G+GY+S EPVRIT + KAKV +  HIT+EE ++S+E K V   R   F RI  S  R S FQR+ TS  K++   +T + T+L  F+RLN + 
Subjt:  ALPTSRKGLGYKSPEPVRITRREKAKVEDANHITIEEVEESKENKNV-GHRVPAFKRIGPSTSRVSAFQRLGTSKRKENKMPATTNKTQLPIFERLNKAM

Query:  GEARTFS
         + R+ S
Subjt:  GEARTFS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAAAGGTAACCTTGAAGCAACTACGCATCTCCATGGAAGAGCTTTCTGACAGCAAGTTATTAATCCAAGGCTTCAACCAAGGCGGACAACGGGCGATTGGCATGAT
ACGGCTTGAGGTCATCATTGGCAAGCTGAGTGCAGATGCTTTGTTCCATGTTATAGATTGTAAGACAACATATCGACTACTATTGGGACGACCCTGGATTCATGAAAACC
GAGTTGTTACTTCCTCGTTGCATCAATGCTTTAAGTTTTACCAAGACGGGGTTAAGAAAGTAGAAGCTGACACAAATCCGTTCTTGGAGGCCGAGTCTCATTTCGCCGAT
GCAAAATTCTATGCAAAGAACGAGACTGTGGAGAAAATAGTGCCACATGAGGTCCCTGCGATAAAAGAAAGTGAAAAAGCTAAGCTAAAACCAGAGGCCGACATAAAAAA
GAAATGGGTAGTGAGAAAAGAAAAGTCATGCCCAGTAAAGATAGAGGCTTCAACGAGTCTAGTAGCTCCTAAGGCTCTAAAACATGAGAAACTTCCAACTTCACCCATCT
TACGCTATGTCCCTATATCCCGACGAAAAAAGGGTAAAGCACCTTTCACCGAATGTTCTAAAAAATTGAAAGTAGGTGATATTCAAGTATTGAGGGAAAGTTTCACCACT
CCTTTGACAAAGATGAAAAAGCAATGGAGTCAGAGGAGCGAAGGAGATGAGAAGAATGTGGCTTTGCCTGAGAAGCGAACAAAGGATGGATTTGACCCCAATGCGTACAG
ACTGCTAGCTAAAGCAGGGTATGATTTCACGACACATACCGAGTTCAAACGCTTAAGTATATTTGATGACCAAGCCGAGCTTTCTTCTACGCAAAAGAAGCTGTTGAAGA
AAGGTTACGCTCTACCAACATCAAGAAAAGGACTCGGATATAAGTCACCTGAACCAGTTCGCATAACAAGAAGAGAAAAGGCAAAGGTGGAAGATGCCAACCACATAACC
ATTGAAGAGGTTGAAGAATCAAAGGAAAATAAGAATGTTGGTCATAGGGTACCCGCCTTTAAACGCATTGGACCATCAACATCTCGTGTTTCAGCATTTCAAAGGTTAGG
TACATCAAAAAGAAAAGAGAATAAAATGCCTGCTACCACCAATAAGACACAATTACCTATTTTTGAAAGATTGAATAAAGCCATGGGAGAGGCAAGAACATTCTCGACTT
CAGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCAAAGGTAACCTTGAAGCAACTACGCATCTCCATGGAAGAGCTTTCTGACAGCAAGTTATTAATCCAAGGCTTCAACCAAGGCGGACAACGGGCGATTGGCATGAT
ACGGCTTGAGGTCATCATTGGCAAGCTGAGTGCAGATGCTTTGTTCCATGTTATAGATTGTAAGACAACATATCGACTACTATTGGGACGACCCTGGATTCATGAAAACC
GAGTTGTTACTTCCTCGTTGCATCAATGCTTTAAGTTTTACCAAGACGGGGTTAAGAAAGTAGAAGCTGACACAAATCCGTTCTTGGAGGCCGAGTCTCATTTCGCCGAT
GCAAAATTCTATGCAAAGAACGAGACTGTGGAGAAAATAGTGCCACATGAGGTCCCTGCGATAAAAGAAAGTGAAAAAGCTAAGCTAAAACCAGAGGCCGACATAAAAAA
GAAATGGGTAGTGAGAAAAGAAAAGTCATGCCCAGTAAAGATAGAGGCTTCAACGAGTCTAGTAGCTCCTAAGGCTCTAAAACATGAGAAACTTCCAACTTCACCCATCT
TACGCTATGTCCCTATATCCCGACGAAAAAAGGGTAAAGCACCTTTCACCGAATGTTCTAAAAAATTGAAAGTAGGTGATATTCAAGTATTGAGGGAAAGTTTCACCACT
CCTTTGACAAAGATGAAAAAGCAATGGAGTCAGAGGAGCGAAGGAGATGAGAAGAATGTGGCTTTGCCTGAGAAGCGAACAAAGGATGGATTTGACCCCAATGCGTACAG
ACTGCTAGCTAAAGCAGGGTATGATTTCACGACACATACCGAGTTCAAACGCTTAAGTATATTTGATGACCAAGCCGAGCTTTCTTCTACGCAAAAGAAGCTGTTGAAGA
AAGGTTACGCTCTACCAACATCAAGAAAAGGACTCGGATATAAGTCACCTGAACCAGTTCGCATAACAAGAAGAGAAAAGGCAAAGGTGGAAGATGCCAACCACATAACC
ATTGAAGAGGTTGAAGAATCAAAGGAAAATAAGAATGTTGGTCATAGGGTACCCGCCTTTAAACGCATTGGACCATCAACATCTCGTGTTTCAGCATTTCAAAGGTTAGG
TACATCAAAAAGAAAAGAGAATAAAATGCCTGCTACCACCAATAAGACACAATTACCTATTTTTGAAAGATTGAATAAAGCCATGGGAGAGGCAAGAACATTCTCGACTT
CAGTGTAA
Protein sequenceShow/hide protein sequence
MPKVTLKQLRISMEELSDSKLLIQGFNQGGQRAIGMIRLEVIIGKLSADALFHVIDCKTTYRLLLGRPWIHENRVVTSSLHQCFKFYQDGVKKVEADTNPFLEAESHFAD
AKFYAKNETVEKIVPHEVPAIKESEKAKLKPEADIKKKWVVRKEKSCPVKIEASTSLVAPKALKHEKLPTSPILRYVPISRRKKGKAPFTECSKKLKVGDIQVLRESFTT
PLTKMKKQWSQRSEGDEKNVALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGYALPTSRKGLGYKSPEPVRITRREKAKVEDANHIT
IEEVEESKENKNVGHRVPAFKRIGPSTSRVSAFQRLGTSKRKENKMPATTNKTQLPIFERLNKAMGEARTFSTSV